diff --git a/doc/formats.pdf b/doc/formats.pdf index 09334b6..8f9d9dc 100644 Binary files a/doc/formats.pdf and b/doc/formats.pdf differ diff --git a/doc/formats.tex b/doc/formats.tex index 69bdfab..94145c1 100644 --- a/doc/formats.tex +++ b/doc/formats.tex @@ -151,7 +151,8 @@ \subsection{thetav2} \subsubsection{Theta definitions} Let $\eta$ be the site frequency spectra. Then $\eta_i$ is the posterior probablity of being in frequency $i$. \begin{itemize} -\item[Watterson] $\sum_{i=1}^{n-1}\eta_i/a^{-1}, a=\sum_{i=1}^{n-1}i$ +\item[Watterson] $\sum_{i=1}^{n-1}\eta_i / a_1$, + $a_1=\sum_{i=1}^{n-1} 1/i$ \item[$\pi$] $ {{n}\choose{2}}^{-1}\sum_{i=1}^{n-1}i(n-i)\eta_i$ \item[FuLi] $\eta_1$ \item[FayH] $ {{n}\choose{2}}^{-1}\sum_{i=1}^{n-1}i^2\eta_i$