From e9544e3032f096bd140f784ba34632602cab9ddc Mon Sep 17 00:00:00 2001
From: vickimzhang <vicki.zhang@apexrms.com>
Date: Fri, 5 Dec 2025 14:05:29 -0500
Subject: [PATCH 1/4] create minimalist conda yml file

---
 src/helloworldR.yml | 199 +-------------------------------------------
 1 file changed, 2 insertions(+), 197 deletions(-)

diff --git a/src/helloworldR.yml b/src/helloworldR.yml
index 97238f0..9b879a3 100644
--- a/src/helloworldR.yml
+++ b/src/helloworldR.yml
@@ -2,201 +2,6 @@ name: helloworldR
 channels:
   - conda-forge
   - defaults
-  - https://repo.anaconda.com/pkgs/main
-  - https://repo.anaconda.com/pkgs/r
-  - https://repo.anaconda.com/pkgs/msys2
 dependencies:
-  - _r-mutex=1.0.1=anacondar_1
-  - bzip2=1.0.8=h2466b09_7
-  - ca-certificates=2024.12.14=h56e8100_0
-  - cairo=1.18.0=h91e5215_2
-  - font-ttf-dejavu-sans-mono=2.37=hab24e00_0
-  - font-ttf-inconsolata=3.000=h77eed37_0
-  - font-ttf-source-code-pro=2.038=h77eed37_0
-  - font-ttf-ubuntu=0.83=h77eed37_3
-  - fontconfig=2.15.0=h765892d_1
-  - fonts-conda-ecosystem=1=0
-  - fonts-conda-forge=1=0
-  - freetype=2.12.1=hdaf720e_2
-  - fribidi=1.0.10=h8d14728_0
-  - graphite2=1.3.13=h63175ca_1003
-  - harfbuzz=8.5.0=h81778c3_0
-  - icu=73.2=h63175ca_0
-  - intel-openmp=2024.2.1=h57928b3_1083
-  - lerc=4.0.0=h63175ca_0
-  - libblas=3.9.0=26_win64_mkl
-  - libdeflate=1.23=h9062f6e_0
-  - libexpat=2.6.4=he0c23c2_0
-  - libffi=3.4.2=h8ffe710_5
-  - libglib=2.82.2=h7025463_0
-  - libhwloc=2.11.2=default_hc8275d1_1000
-  - libiconv=1.17=hcfcfb64_2
-  - libintl=0.22.5=h5728263_3
-  - libjpeg-turbo=3.0.0=hcfcfb64_1
-  - liblapack=3.9.0=26_win64_mkl
-  - liblzma=5.6.3=h2466b09_1
-  - libpng=1.6.44=h3ca93ac_0
-  - libtiff=4.7.0=h797046b_3
-  - libxml2=2.13.5=he286e8c_1
-  - libzlib=1.3.1=h2466b09_2
-  - m2w64-bwidget=1.9.10=2
-  - m2w64-bzip2=1.0.6=6
-  - m2w64-expat=2.1.1=2
-  - m2w64-fftw=3.3.4=6
-  - m2w64-flac=1.3.1=3
-  - m2w64-gcc-libgfortran=5.3.0=6
-  - m2w64-gcc-libs=5.3.0=7
-  - m2w64-gcc-libs-core=5.3.0=7
-  - m2w64-gettext=0.19.7=2
-  - m2w64-gmp=6.1.0=2
-  - m2w64-gsl=2.1=2
-  - m2w64-icu=58.2=2
-  - m2w64-libiconv=1.14=6
-  - m2w64-libjpeg-turbo=1.4.2=3
-  - m2w64-libogg=1.3.2=3
-  - m2w64-libpng=1.6.21=2
-  - m2w64-libsndfile=1.0.26=2
-  - m2w64-libtiff=4.0.6=2
-  - m2w64-libvorbis=1.3.5=2
-  - m2w64-libwinpthread-git=5.0.0.4634.697f757=2
-  - m2w64-libxml2=2.9.3=3
-  - m2w64-mpfr=3.1.4=4
-  - m2w64-pcre2=10.34=0
-  - m2w64-speex=1.2rc2=3
-  - m2w64-speexdsp=1.2rc3=3
-  - m2w64-tcl=8.6.5=3
-  - m2w64-tk=8.6.5=3
-  - m2w64-tktable=2.10=5
-  - m2w64-wineditline=2.101=5
-  - m2w64-xz=5.2.2=2
-  - m2w64-zlib=1.2.8=10
-  - mkl=2024.2.2=h66d3029_15
-  - msys2-conda-epoch=20160418=1
-  - openssl=3.4.0=ha4e3fda_1
-  - pandoc=2.19.2=h57928b3_2
-  - pcre2=10.44=h3d7b363_2
-  - pixman=0.44.2=had0cd8c_0
-  - pthreads-win32=2.9.1=h2466b09_4
-  - r-askpass=1.2.0=r41h6d2157b_0
-  - r-assertthat=0.2.1=r41hc72bb7e_3
-  - r-backports=1.5.0=r41h6c66454_0
-  - r-base=4.1.3=h22dd5fe_17
-  - r-base64enc=0.1_3=r41h6d2157b_1006
-  - r-bit=4.0.5=r41h6d2157b_1
-  - r-bit64=4.0.5=r41h6d2157b_2
-  - r-blob=1.2.4=r41hc72bb7e_0
-  - r-broom=1.0.5=r41hc72bb7e_0
-  - r-bslib=0.5.0=r41hc72bb7e_0
-  - r-cachem=1.1.0=r41h6c66454_0
-  - r-callr=3.7.3=r41hc72bb7e_0
-  - r-cellranger=1.1.0=r41hc72bb7e_1005
-  - r-cli=3.6.3=r41he75b88d_0
-  - r-clipr=0.8.0=r41hc72bb7e_1
-  - r-colorspace=2.1_0=r41h6d2157b_1
-  - r-conflicted=1.2.0=r41h785f33e_0
-  - r-cpp11=0.4.7=r41hc72bb7e_0
-  - r-crayon=1.5.2=r41hc72bb7e_1
-  - r-curl=4.3.3=r41h6d2157b_2
-  - r-data.table=1.15.4=r41h6d2157b_0
-  - r-dbi=1.1.3=r41hc72bb7e_1
-  - r-dbplyr=2.3.2=r41hc72bb7e_0
-  - r-digest=0.6.36=r41he75b88d_0
-  - r-dplyr=1.1.4=r41ha856d6a_0
-  - r-dtplyr=1.3.1=r41hc72bb7e_0
-  - r-ellipsis=0.3.2=r41h6d2157b_2
-  - r-evaluate=0.21=r41hc72bb7e_0
-  - r-fansi=1.0.6=r41h6d2157b_0
-  - r-farver=2.1.2=r41he75b88d_0
-  - r-fastmap=1.2.0=r41he75b88d_0
-  - r-fontawesome=0.5.1=r41hc72bb7e_0
-  - r-forcats=1.0.0=r41hc72bb7e_0
-  - r-fs=1.6.4=r41h3f0a074_0
-  - r-gargle=1.4.0=r41h785f33e_0
-  - r-generics=0.1.3=r41hc72bb7e_1
-  - r-ggplot2=3.4.2=r41hc72bb7e_0
-  - r-glue=1.7.0=r41h6d2157b_0
-  - r-googledrive=2.1.0=r41hc72bb7e_0
-  - r-googlesheets4=1.1.0=r41h785f33e_0
-  - r-gtable=0.3.3=r41hc72bb7e_0
-  - r-gtools=3.9.5=r41h6d2157b_0
-  - r-haven=2.5.4=r41ha856d6a_0
-  - r-highr=0.10=r41hc72bb7e_0
-  - r-hms=1.1.3=r41hc72bb7e_0
-  - r-htmltools=0.5.8.1=r41ha856d6a_0
-  - r-httr=1.4.6=r41hc72bb7e_0
-  - r-ids=1.0.1=r41hc72bb7e_2
-  - r-isoband=0.2.7=r41ha856d6a_2
-  - r-jquerylib=0.1.4=r41hc72bb7e_1
-  - r-jsonlite=1.8.8=r41h6d2157b_0
-  - r-knitr=1.43=r41hc72bb7e_0
-  - r-labeling=0.4.2=r41hc72bb7e_2
-  - r-lattice=0.22_6=r41h6d2157b_0
-  - r-lifecycle=1.0.3=r41hc72bb7e_1
-  - r-lubridate=1.9.3=r41h6d2157b_0
-  - r-magrittr=2.0.3=r41h6d2157b_2
-  - r-mass=7.3_58.3=r41h6d2157b_0
-  - r-matrix=1.6_5=r41hb9981e2_0
-  - r-memoise=2.0.1=r41hc72bb7e_1
-  - r-mgcv=1.9_1=r41hb9981e2_0
-  - r-mime=0.12=r41h6d2157b_2
-  - r-modelr=0.1.11=r41hc72bb7e_0
-  - r-munsell=0.5.0=r41hc72bb7e_1005
-  - r-nlme=3.1_165=r41hd63c432_0
-  - r-openssl=2.0.6=r41h81a3cea_1
-  - r-pillar=1.9.0=r41hc72bb7e_0
-  - r-pkgconfig=2.0.3=r41hc72bb7e_2
-  - r-plogr=0.2.0=r41hc72bb7e_1004
-  - r-prettyunits=1.1.1=r41hc72bb7e_2
-  - r-processx=3.8.4=r41h6d2157b_0
-  - r-progress=1.2.2=r41hc72bb7e_3
-  - r-ps=1.7.6=r41h6d2157b_0
-  - r-purrr=1.0.2=r41h6d2157b_0
-  - r-r6=2.5.1=r41hc72bb7e_1
-  - r-ragg=1.3.2=r41he767bbc_0
-  - r-rappdirs=0.3.3=r41h6d2157b_2
-  - r-rcolorbrewer=1.1_3=r41h785f33e_1
-  - r-rcpp=1.0.12=r41ha856d6a_0
-  - r-readr=2.1.5=r41ha856d6a_0
-  - r-readxl=1.4.3=r41h1c2d66b_0
-  - r-rematch=1.0.1=r41hc72bb7e_1005
-  - r-rematch2=2.1.2=r41hc72bb7e_2
-  - r-reprex=2.0.2=r41hc72bb7e_1
-  - r-rlang=1.1.4=r41he75b88d_0
-  - r-rmarkdown=2.22=r41hc72bb7e_0
-  - r-rsqlite=2.3.4=r41ha856d6a_0
-  - r-rstudioapi=0.14=r41hc72bb7e_1
-  - r-rsyncrosim=2.0.0=r41hd8ed1ab_0
-  - r-rvest=1.0.3=r41hc72bb7e_1
-  - r-sass=0.4.9=r41ha856d6a_0
-  - r-scales=1.2.1=r41hc72bb7e_1
-  - r-selectr=0.4_2=r41hc72bb7e_2
-  - r-stringi=1.8.4=r41h3f0a074_0
-  - r-stringr=1.5.0=r41h785f33e_0
-  - r-sys=3.4.2=r41h6d2157b_1
-  - r-systemfonts=1.1.0=r41h754b566_0
-  - r-terra=1.5_21=r41ha856d6a_8
-  - r-textshaping=0.4.0=r41hdd868d5_0
-  - r-tibble=3.2.1=r41h6d2157b_2
-  - r-tidyr=1.3.1=r41ha856d6a_0
-  - r-tidyselect=1.2.0=r41h6addd8b_1
-  - r-tidyverse=2.0.0=r41h785f33e_0
-  - r-timechange=0.3.0=r41ha856d6a_0
-  - r-tinytex=0.45=r41hc72bb7e_0
-  - r-tzdb=0.4.0=r41ha856d6a_1
-  - r-utf8=1.2.4=r41h6d2157b_0
-  - r-uuid=1.2_0=r41h6d2157b_0
-  - r-vctrs=0.6.5=r41ha856d6a_0
-  - r-viridislite=0.4.1=r41hc72bb7e_1
-  - r-vroom=1.6.5=r41ha856d6a_0
-  - r-withr=2.5.0=r41hc72bb7e_1
-  - r-xfun=0.45=r41he75b88d_0
-  - r-xml2=1.3.3=r41ha856d6a_2
-  - r-yaml=2.3.8=r41h6d2157b_0
-  - tbb=2021.13.0=h62715c5_1
-  - ucrt=10.0.22621.0=h57928b3_1
-  - vc=14.3=ha32ba9b_23
-  - vc14_runtime=14.42.34433=he29a5d6_23
-  - vs2015_runtime=14.42.34433=hdffcdeb_23
-  - zlib=1.3.1=h2466b09_2
-  - zstd=1.5.6=h0ea2cb4_0
-prefix: C:\Users\DorianaRomualdi\miniconda3\envs\helloworldR
+  - r-base=4.1.*
+  - r-rsyncrosim
\ No newline at end of file

From faef384b7f89c707d0ebbae6f6a5622021c3907d Mon Sep 17 00:00:00 2001
From: vickimzhang <vicki.zhang@apexrms.com>
Date: Mon, 8 Dec 2025 09:35:06 -0500
Subject: [PATCH 2/4] update version number and versions

---
 src/helloworldR.yml | 5 +++--
 src/package.xml     | 4 ++--
 2 files changed, 5 insertions(+), 4 deletions(-)

diff --git a/src/helloworldR.yml b/src/helloworldR.yml
index 9b879a3..6b9d82d 100644
--- a/src/helloworldR.yml
+++ b/src/helloworldR.yml
@@ -3,5 +3,6 @@ channels:
   - conda-forge
   - defaults
 dependencies:
-  - r-base=4.1.*
-  - r-rsyncrosim
\ No newline at end of file
+  - r-base=4.1.3
+  - r-rsyncrosim=2.1.7
+  - r-terra=1.5_21
\ No newline at end of file
diff --git a/src/package.xml b/src/package.xml
index a2a8008..1ef97fe 100644
--- a/src/package.xml
+++ b/src/package.xml
@@ -16,7 +16,7 @@
 
 <!--Transformer-->
 
-<transformer name="Main" displayName="Hello World" programArguments="model.R" condaEnv="helloworldR.yml" condaEnvVersion="1">
+<transformer name="Main" displayName="Hello World" programArguments="model.R" condaEnv="helloworldR.yml" condaEnvVersion="2">
   <dataSheet name="InputDatasheet" type="Input"/>
   <dataSheet name="OutputDatasheet" type="Output"/>
 </transformer>
@@ -29,4 +29,4 @@
   <item name="OutputDatasheet"/>
 </layout>
 
-</package>
+</package>
\ No newline at end of file

From d7bb17ed54c4ecb4f72376aa219bf5d3696b5038 Mon Sep 17 00:00:00 2001
From: vickimzhang <vicki.zhang@apexrms.com>
Date: Tue, 9 Dec 2025 09:19:13 -0500
Subject: [PATCH 3/4] update package version and dependencies version

---
 src/helloworldR.yml | 6 +++---
 src/package.xml     | 2 +-
 2 files changed, 4 insertions(+), 4 deletions(-)

diff --git a/src/helloworldR.yml b/src/helloworldR.yml
index 6b9d82d..21e203d 100644
--- a/src/helloworldR.yml
+++ b/src/helloworldR.yml
@@ -3,6 +3,6 @@ channels:
   - conda-forge
   - defaults
 dependencies:
-  - r-base=4.1.3
-  - r-rsyncrosim=2.1.7
-  - r-terra=1.5_21
\ No newline at end of file
+  - r-base>=4.1.3
+  - r-rsyncrosim>=2.1.7
+  - r-terra>=1.5_21
\ No newline at end of file
diff --git a/src/package.xml b/src/package.xml
index 1ef97fe..68d00ad 100644
--- a/src/package.xml
+++ b/src/package.xml
@@ -1,5 +1,5 @@
 <?xml version="1.0" encoding="utf-8"?>
-<package name="helloworldConda" displayName="Hello World Conda (R)" description="Example demonstrating how to create a package with conda" version="2.0.0" url="https://apexrms.github.io/helloworldEnhanced/">
+<package name="helloworldConda" displayName="Hello World Conda (R)" description="Example demonstrating how to create a package with conda" version="2.0.1" url="https://apexrms.github.io/helloworldEnhanced/">
 
 <!--Scenario Datasheets-->
 

From 297e15fce08d10604e2c8f308f9ba901badedb8a Mon Sep 17 00:00:00 2001
From: vickimzhang <vicki.zhang@apexrms.com>
Date: Fri, 12 Dec 2025 09:51:10 -0500
Subject: [PATCH 4/4] make versions exact

---
 src/helloworldR.yml | 6 +++---
 1 file changed, 3 insertions(+), 3 deletions(-)

diff --git a/src/helloworldR.yml b/src/helloworldR.yml
index 21e203d..6b9d82d 100644
--- a/src/helloworldR.yml
+++ b/src/helloworldR.yml
@@ -3,6 +3,6 @@ channels:
   - conda-forge
   - defaults
 dependencies:
-  - r-base>=4.1.3
-  - r-rsyncrosim>=2.1.7
-  - r-terra>=1.5_21
\ No newline at end of file
+  - r-base=4.1.3
+  - r-rsyncrosim=2.1.7
+  - r-terra=1.5_21
\ No newline at end of file