In T.L. Hill's book, "Free Energy Transduction and Biochemical Cycle Kinetics", he discusses simple relationships between transition fluxes, net cycle fluxes, and operational fluxes. Specifically, equations 3.3 and 3.4 show flux identities for a simple model. A test should be added that verifies these identities to further ensure consistency between various flux calculation types.
Test should be written to compare the output expressions, which can be compared with the normalization factor Sigma.