Skip to content

CCI Maps might have reversed axis labels! #309

@je71xusa

Description

@je71xusa

Hello there stlearn team,

I was using you package when I realized that the CCI Maps show a reverse direction for the the interaction. So I checked in you documentation and there it seems to be the same. Example using THBS1_ITGB1 from your documentation: https://stlearn.readthedocs.io/en/stable/tutorials/stLearn-CCI.html

If you focus on Stroma -> Mesenchymal in the network plot there is only one direction from stroma to mesenchymal:
image

This is also the case in the chord-plot and LR-CC-Map:
image
image

But in the CCI Map there is a dot shown from mesenchymal as sender and stroma as receiver while the reverse is missing:
image

Am I missing something here or did the labels in the CCI Map just get swapped?

I hope you can clarify this for me. Thank you!

Edit:
Just realized there is already another issue of this: #299

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions