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changed, 17 insertions(+), 7 deletions(-) diff --git a/README.md b/README.md index 7dd0bd32..0d2a997a 100644 --- a/README.md +++ b/README.md @@ -316,13 +316,23 @@ use_multiprocessing = os.getenv("USE_MULTIPROCESSING", "False") == "True" ## Development build -HashStore is a python package, and built using the [Python Poetry](https://python-poetry.org) -build tool. - -To install `hashstore` locally, create a virtual environment for python 3.9+, -install poetry, and then install or build the package with `poetry install` or `poetry build`, -respectively. Note, installing `hashstore` with poetry will also make the `hashstore` command -available through the command line terminal (see `HashStore Client` section below for details). +HashStore is a python package. We recommend installing it using `uv`. Instructions on how to install and set up `uv` can be found [here](https://gist.github.com/datadavev/3975f244e5db500ba0328ef771ca74dd). + +Friendly Notes: + - You may run into a `command not found: compdef` when adding code to your `.zshrc` file, this can be resolved by adjusting the code to be: + ```sh + # .zshrc + autoload -Uz compinit + compinit + eval "$(uv generate-shell-completion zsh)" + eval "$(uvx --generate-shell-completion zsh)" + ``` + - When downloading the script `uv-python-symlink`, an extension may be added to it, for example: `uv-python-symlink.txt`. It may also not have an executable status. You can execute the following to adjust it: + ```sh + $ mv uv-python-symlink uv-python-symlink.sh + chmod +x uv-python-symlink.sh + ``` + - After following the steps and navigating to the python project, `uv` may not have sufficient permissions to run. Follow the given prompts and execute `direnv allow` To run tests, navigate to the root directory and run `pytest`. The test suite contains tests that take a longer time to run (relating to the storage of large files) - to execute all tests, run From b91e8bb0f6640c368130fa5990ad6ca40653a716 Mon Sep 17 00:00:00 2001 From: Dou Mok Date: Thu, 4 Dec 2025 11:32:03 -0800 Subject: [PATCH 3/7] Add 'exceptiongroup' dependency to 'pyproject.toml' to resolve python 3.10 workflow issue --- pyproject.toml | 1 + 1 file changed, 1 insertion(+) diff --git a/pyproject.toml b/pyproject.toml index f954c4a4..02e023b5 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -43,6 +43,7 @@ hashstore = "hashstore.hashstoreclient:main" [dependency-groups] dev = [ "pytest>=7.2.0", + "exceptiongroup>=1.1.0", "black>=22.10.0", "pylint>=2.17.4", "pg8000>=1.29.8", From 16a2598cd5ef794b74e81b65ff968f192caf4cb6 Mon Sep 17 00:00:00 2001 From: Dou Mok Date: Thu, 4 Dec 2025 11:32:33 -0800 Subject: [PATCH 4/7] Add python 3.11 to github workflow test --- .github/workflows/poetry-package-test.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/poetry-package-test.yml b/.github/workflows/poetry-package-test.yml index dc16d638..9d562d87 100644 --- a/.github/workflows/poetry-package-test.yml +++ b/.github/workflows/poetry-package-test.yml @@ -16,7 +16,7 @@ jobs: strategy: fail-fast: false matrix: - python-version: ["3.9", "3.10"] + python-version: ["3.9", "3.10", "3.11"] steps: - uses: actions/checkout@v3 From 243953dd16469cab81cd6e3bba3a298acc7dbb80 Mon Sep 17 00:00:00 2001 From: datadavev <605409+datadavev@users.noreply.github.com> Date: Thu, 4 Dec 2025 14:51:50 -0500 Subject: [PATCH 5/7] Add workflow for CI with uv, version bump, limit python upper version --- .github/workflows/uv-package-test.yml | 30 +++++++++++++++++++++++++++ pyproject.toml | 4 ++-- 2 files changed, 32 insertions(+), 2 deletions(-) create mode 100644 .github/workflows/uv-package-test.yml diff --git a/.github/workflows/uv-package-test.yml b/.github/workflows/uv-package-test.yml new file mode 100644 index 00000000..8e7c27ba --- /dev/null +++ b/.github/workflows/uv-package-test.yml @@ -0,0 +1,30 @@ +name: Python CI with uv and pytest +on: + workflow_dispatch: + push: + branches: [ "main"] + pull_request: + branches: [ "main" ] +jobs: + build: + + runs-on: ubuntu-latest + strategy: + fail-fast: false + matrix: + python-version: ["3.9", "3.10", "3.11", "3.12", "3.13", "3.14" ] + steps: + - uses: actions/checkout@v4 + - name: Setup uv + uses: astral-sh/uv-setup-action@v1.2.0 + - name: Set up Python ${{ matrix.python-version }} + uses: actions/setup-python@v5 + with: + python-version: ${{ matrix.python-version }} + cache: 'uv' + - name: Create uv virtual environment + run: uv venv + - name: Install dependencies in uv environment + run: uv pip install -e '.[dev]' + - name: Run tests with pytest + run: uv run pytest diff --git a/pyproject.toml b/pyproject.toml index f954c4a4..95839ac9 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,6 @@ [project] name = "hashstore" -version = "1.1.0" +version = "1.1.1" description = "HashStore, an object storage system using content identifiers." authors = [ { name = "Dou Mok", email = "douming.mok@gmail.com" }, @@ -10,7 +10,7 @@ authors = [ { name = "Jeanette Clark" }, { name = "Ian M. Nesbitt" }, ] -requires-python = ">=3.9" +requires-python = ">=3.9, <4.0" readme = "README.md" keywords = [ "filesystem", From 7ca4b33f4d52c0dc06f1e3e60980d97a94247978 Mon Sep 17 00:00:00 2001 From: datadavev <605409+datadavev@users.noreply.github.com> Date: Thu, 4 Dec 2025 15:03:59 -0500 Subject: [PATCH 6/7] Update uv CI workflow to use current --- .github/workflows/uv-package-test.yml | 22 ++++++++++------------ 1 file changed, 10 insertions(+), 12 deletions(-) diff --git a/.github/workflows/uv-package-test.yml b/.github/workflows/uv-package-test.yml index 8e7c27ba..8333412b 100644 --- a/.github/workflows/uv-package-test.yml +++ b/.github/workflows/uv-package-test.yml @@ -6,25 +6,23 @@ on: pull_request: branches: [ "main" ] jobs: - build: - + build: runs-on: ubuntu-latest strategy: fail-fast: false matrix: python-version: ["3.9", "3.10", "3.11", "3.12", "3.13", "3.14" ] steps: - - uses: actions/checkout@v4 + - uses: actions/checkout@v5 + - name: Setup uv - uses: astral-sh/uv-setup-action@v1.2.0 - - name: Set up Python ${{ matrix.python-version }} - uses: actions/setup-python@v5 + uses: astral-sh/setup-uv@v7 with: + version: '0.9.15' python-version: ${{ matrix.python-version }} - cache: 'uv' - - name: Create uv virtual environment - run: uv venv - - name: Install dependencies in uv environment - run: uv pip install -e '.[dev]' + + - name: Install the project + run: uv sync --locked --all-extras --dev + - name: Run tests with pytest - run: uv run pytest + run: uv run pytest tests From 1d3fdf68ee9dbc22fd13264fa381c139306657ed Mon Sep 17 00:00:00 2001 From: datadavev <605409+datadavev@users.noreply.github.com> Date: Thu, 4 Dec 2025 15:05:21 -0500 Subject: [PATCH 7/7] uv CI withough lock --- .github/workflows/uv-package-test.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/uv-package-test.yml b/.github/workflows/uv-package-test.yml index 8333412b..e9ebefe6 100644 --- a/.github/workflows/uv-package-test.yml +++ b/.github/workflows/uv-package-test.yml @@ -22,7 +22,7 @@ jobs: python-version: ${{ matrix.python-version }} - name: Install the project - run: uv sync --locked --all-extras --dev + run: uv sync --all-extras --dev - name: Run tests with pytest run: uv run pytest tests