From 3f8b69d8b80a22c6acdf5654c05b7eebf5a7160b Mon Sep 17 00:00:00 2001 From: Ollie Copping Date: Wed, 5 Feb 2025 09:10:15 +0000 Subject: [PATCH 1/4] Added copier config for container, ci and file structure --- .copier-answers.yml | 16 ++ .devcontainer/devcontainer.json | 46 ++++++ .github/CONTRIBUTING.md | 27 ++++ .github/ISSUE_TEMPLATE/bug_report.md | 21 +++ .github/ISSUE_TEMPLATE/issue.md | 13 ++ .../pull_request_template.md | 9 ++ .../actions/install_requirements/action.yml | 34 +++++ .github/dependabot.yml | 24 +++ .github/pages/index.html | 11 ++ .github/pages/make_switcher.py | 95 ++++++++++++ .github/workflows/_check.yml | 27 ++++ .github/workflows/_container.yml | 56 +++++++ .github/workflows/_dist.yml | 36 +++++ .github/workflows/_docs.yml | 54 +++++++ .github/workflows/_pypi.yml | 19 +++ .github/workflows/_release.yml | 32 ++++ .github/workflows/_test.yml | 62 ++++++++ .github/workflows/_tox.yml | 22 +++ .github/workflows/ci.yml | 54 +++++++ .github/workflows/periodic.yml | 13 ++ .gitignore | 104 ++++++++----- .pre-commit-config.yaml | 23 +++ .vscode/extensions.json | 5 + .vscode/launch.json | 23 +++ .vscode/settings.json | 11 ++ .vscode/tasks.json | 16 ++ Dockerfile | 29 ++++ LICENSE | 4 +- README.md | 32 ++++ catalog-info.yaml | 10 ++ create_gui.yaml => example/create_gui.yaml | 0 pyproject.toml | 140 ++++++++++++++++-- src/phoebus_guibuilder/__init__.py | 3 + src/phoebus_guibuilder/__main__.py | 16 ++ src/phoebus_guibuilder/guibuilder.py | 83 +++++++++++ tests/conftest.py | 15 ++ tests/test_cli.py | 9 ++ 37 files changed, 1146 insertions(+), 48 deletions(-) create mode 100644 .copier-answers.yml create mode 100644 .devcontainer/devcontainer.json create mode 100644 .github/CONTRIBUTING.md create mode 100644 .github/ISSUE_TEMPLATE/bug_report.md create mode 100644 .github/ISSUE_TEMPLATE/issue.md create mode 100644 .github/PULL_REQUEST_TEMPLATE/pull_request_template.md create mode 100644 .github/actions/install_requirements/action.yml create mode 100644 .github/dependabot.yml create mode 100644 .github/pages/index.html create mode 100755 .github/pages/make_switcher.py create mode 100644 .github/workflows/_check.yml create mode 100644 .github/workflows/_container.yml create mode 100644 .github/workflows/_dist.yml create mode 100644 .github/workflows/_docs.yml create mode 100644 .github/workflows/_pypi.yml create mode 100644 .github/workflows/_release.yml create mode 100644 .github/workflows/_test.yml create mode 100644 .github/workflows/_tox.yml create mode 100644 .github/workflows/ci.yml create mode 100644 .github/workflows/periodic.yml create mode 100644 .pre-commit-config.yaml create mode 100644 .vscode/extensions.json create mode 100644 .vscode/launch.json create mode 100644 .vscode/settings.json create mode 100644 .vscode/tasks.json create mode 100644 Dockerfile create mode 100644 README.md create mode 100644 catalog-info.yaml rename create_gui.yaml => example/create_gui.yaml (100%) create mode 100644 src/phoebus_guibuilder/__init__.py create mode 100644 src/phoebus_guibuilder/__main__.py create mode 100644 src/phoebus_guibuilder/guibuilder.py create mode 100644 tests/conftest.py create mode 100644 tests/test_cli.py diff --git a/.copier-answers.yml b/.copier-answers.yml new file mode 100644 index 00000000..d83b1628 --- /dev/null +++ b/.copier-answers.yml @@ -0,0 +1,16 @@ +# Changes here will be overwritten by Copier +_commit: 2.1.0 +_src_path: gh:DiamondLightSource/python-copier-template +author_email: oliver.copping@diamond.ac.uk +author_name: Oliver Copping +component_owner: group:default/sscc +description: A package for building GUIs +distribution_name: phoebus-guibuilder +docker: true +docs_type: README +git_platform: github.com +github_org: DiamondLightSource +package_name: phoebus_guibuilder +pypi: false +repo_name: phoebus-guibuilder +type_checker: pyright diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json new file mode 100644 index 00000000..79b85ff4 --- /dev/null +++ b/.devcontainer/devcontainer.json @@ -0,0 +1,46 @@ +// For format details, see https://containers.dev/implementors/json_reference/ +{ + "name": "Python 3 Developer Container", + "build": { + "dockerfile": "../Dockerfile", + "target": "developer" + }, + "remoteEnv": { + // Allow X11 apps to run inside the container + "DISPLAY": "${localEnv:DISPLAY}" + }, + "customizations": { + "vscode": { + // Set *default* container specific settings.json values on container create. + "settings": { + "python.defaultInterpreterPath": "/venv/bin/python" + }, + // Add the IDs of extensions you want installed when the container is created. + "extensions": [ + "ms-python.python", + "github.vscode-github-actions", + "tamasfe.even-better-toml", + "redhat.vscode-yaml", + "ryanluker.vscode-coverage-gutters", + "charliermarsh.ruff", + "ms-azuretools.vscode-docker" + ] + } + }, + "features": { + // Some default things like git config + "ghcr.io/devcontainers/features/common-utils:2": { + "upgradePackages": false + } + }, + "runArgs": [ + // Allow the container to access the host X11 display and EPICS CA + "--net=host", + // Make sure SELinux does not disable with access to host filesystems like tmp + "--security-opt=label=disable" + ], + // Mount the parent as /workspaces so we can pip install peers as editable + "workspaceMount": "source=${localWorkspaceFolder}/..,target=/workspaces,type=bind", + // After the container is created, install the python project in editable form + "postCreateCommand": "pip install $([ -f dev-requirements.txt ] && echo '-c dev-requirements.txt') -e '.[dev]' && pre-commit install" +} \ No newline at end of file diff --git a/.github/CONTRIBUTING.md b/.github/CONTRIBUTING.md new file mode 100644 index 00000000..ad5bce2d --- /dev/null +++ b/.github/CONTRIBUTING.md @@ -0,0 +1,27 @@ +# Contribute to the project + +Contributions and issues are most welcome! All issues and pull requests are +handled through [GitHub](https://github.com/DiamondLightSource/phoebus-guibuilder/issues). Also, please check for any existing issues before +filing a new one. If you have a great idea but it involves big changes, please +file a ticket before making a pull request! We want to make sure you don't spend +your time coding something that might not fit the scope of the project. + +## Issue or Discussion? + +Github also offers [discussions](https://github.com/DiamondLightSource/phoebus-guibuilder/discussions) as a place to ask questions and share ideas. If +your issue is open ended and it is not obvious when it can be "closed", please +raise it as a discussion instead. + +## Code Coverage + +While 100% code coverage does not make a library bug-free, it significantly +reduces the number of easily caught bugs! Please make sure coverage remains the +same or is improved by a pull request! + +## Developer Information + +It is recommended that developers use a [vscode devcontainer](https://code.visualstudio.com/docs/devcontainers/containers). This repository contains configuration to set up a containerized development environment that suits its own needs. + +This project was created using the [Diamond Light Source Copier Template](https://github.com/DiamondLightSource/python-copier-template) for Python projects. + +For more information on common tasks like setting up a developer environment, running the tests, and setting a pre-commit hook, see the template's [How-to guides](https://diamondlightsource.github.io/python-copier-template/2.1.0/how-to.html). diff --git a/.github/ISSUE_TEMPLATE/bug_report.md b/.github/ISSUE_TEMPLATE/bug_report.md new file mode 100644 index 00000000..aa65892f --- /dev/null +++ b/.github/ISSUE_TEMPLATE/bug_report.md @@ -0,0 +1,21 @@ +--- +name: Bug Report +about: The template to use for reporting bugs and usability issues +title: " " +labels: 'bug' +assignees: '' + +--- + +Describe the bug, including a clear and concise description of the expected behavior, the actual behavior and the context in which you encountered it (ideally include details of your environment). + +## Steps To Reproduce +Steps to reproduce the behavior: +1. Go to '...' +2. Click on '....' +3. Scroll down to '....' +4. See error + + +## Acceptance Criteria +- Specific criteria that will be used to judge if the issue is fixed diff --git a/.github/ISSUE_TEMPLATE/issue.md b/.github/ISSUE_TEMPLATE/issue.md new file mode 100644 index 00000000..52c84dd8 --- /dev/null +++ b/.github/ISSUE_TEMPLATE/issue.md @@ -0,0 +1,13 @@ +--- +name: Issue +about: The standard template to use for feature requests, design discussions and tasks +title: " " +labels: '' +assignees: '' + +--- + +A brief description of the issue, including specific stakeholders and the business case where appropriate + +## Acceptance Criteria +- Specific criteria that will be used to judge if the issue is fixed diff --git a/.github/PULL_REQUEST_TEMPLATE/pull_request_template.md b/.github/PULL_REQUEST_TEMPLATE/pull_request_template.md new file mode 100644 index 00000000..de9aefe9 --- /dev/null +++ b/.github/PULL_REQUEST_TEMPLATE/pull_request_template.md @@ -0,0 +1,9 @@ +Fixes #ISSUE + +### Instructions to reviewer on how to test: +1. Do thing x +2. Confirm thing y happens + +### Checks for reviewer +- [ ] Would the PR title make sense to a user on a set of release notes + diff --git a/.github/actions/install_requirements/action.yml b/.github/actions/install_requirements/action.yml new file mode 100644 index 00000000..d33e0805 --- /dev/null +++ b/.github/actions/install_requirements/action.yml @@ -0,0 +1,34 @@ +name: Install requirements +description: Install a version of python then call pip install and report what was installed +inputs: + python-version: + description: Python version to install, default is from Dockerfile + default: "dev" + pip-install: + description: Parameters to pass to pip install + default: "$([ -f dev-requirements.txt ] && echo '-c dev-requirements.txt') -e .[dev]" + +runs: + using: composite + steps: + - name: Get version of python + run: | + PYTHON_VERSION="${{ inputs.python-version }}" + if [ $PYTHON_VERSION == "dev" ]; then + PYTHON_VERSION=$(sed -n "s/ARG PYTHON_VERSION=//p" Dockerfile) + fi + echo "PYTHON_VERSION=$PYTHON_VERSION" >> "$GITHUB_ENV" + shell: bash + + - name: Setup python + uses: actions/setup-python@v5 + with: + python-version: ${{ env.PYTHON_VERSION }} + + - name: Install packages + run: pip install ${{ inputs.pip-install }} + shell: bash + + - name: Report what was installed + run: pip freeze + shell: bash diff --git a/.github/dependabot.yml b/.github/dependabot.yml new file mode 100644 index 00000000..184ba363 --- /dev/null +++ b/.github/dependabot.yml @@ -0,0 +1,24 @@ +# To get started with Dependabot version updates, you'll need to specify which +# package ecosystems to update and where the package manifests are located. +# Please see the documentation for all configuration options: +# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates + +version: 2 +updates: + - package-ecosystem: "github-actions" + directory: "/" + schedule: + interval: "weekly" + groups: + actions: + patterns: + - "*" + + - package-ecosystem: "pip" + directory: "/" + schedule: + interval: "weekly" + groups: + dev-dependencies: + patterns: + - "*" diff --git a/.github/pages/index.html b/.github/pages/index.html new file mode 100644 index 00000000..80f0a009 --- /dev/null +++ b/.github/pages/index.html @@ -0,0 +1,11 @@ + + + + + Redirecting to main branch + + + + + + \ No newline at end of file diff --git a/.github/pages/make_switcher.py b/.github/pages/make_switcher.py new file mode 100755 index 00000000..0babd3c6 --- /dev/null +++ b/.github/pages/make_switcher.py @@ -0,0 +1,95 @@ +import json +import logging +from argparse import ArgumentParser +from pathlib import Path +from subprocess import CalledProcessError, check_output +from typing import List, Optional + + +def report_output(stdout: bytes, label: str) -> List[str]: + ret = stdout.decode().strip().split("\n") + print(f"{label}: {ret}") + return ret + + +def get_branch_contents(ref: str) -> List[str]: + """Get the list of directories in a branch.""" + stdout = check_output(["git", "ls-tree", "-d", "--name-only", ref]) + return report_output(stdout, "Branch contents") + + +def get_sorted_tags_list() -> List[str]: + """Get a list of sorted tags in descending order from the repository.""" + stdout = check_output(["git", "tag", "-l", "--sort=-v:refname"]) + return report_output(stdout, "Tags list") + + +def get_versions(ref: str, add: Optional[str]) -> List[str]: + """Generate the file containing the list of all GitHub Pages builds.""" + # Get the directories (i.e. builds) from the GitHub Pages branch + try: + builds = set(get_branch_contents(ref)) + except CalledProcessError: + builds = set() + logging.warning(f"Cannot get {ref} contents") + + # Add and remove from the list of builds + if add: + builds.add(add) + + # Get a sorted list of tags + tags = get_sorted_tags_list() + + # Make the sorted versions list from main branches and tags + versions: List[str] = [] + for version in ["master", "main"] + tags: + if version in builds: + versions.append(version) + builds.remove(version) + + # Add in anything that is left to the bottom + versions += sorted(builds) + print(f"Sorted versions: {versions}") + return versions + + +def write_json(path: Path, repository: str, versions: str): + org, repo_name = repository.split("/") + pages_url = f"https://{org}.github.io" + if repo_name != f"{org}.github.io": + # Only add the repo name if it isn't the source for the org pages site + pages_url += f"/{repo_name}" + struct = [ + {"version": version, "url": f"{pages_url}/{version}/"} for version in versions + ] + text = json.dumps(struct, indent=2) + print(f"JSON switcher:\n{text}") + path.write_text(text, encoding="utf-8") + + +def main(args=None): + parser = ArgumentParser( + description="Make a versions.json file from gh-pages directories" + ) + parser.add_argument( + "--add", + help="Add this directory to the list of existing directories", + ) + parser.add_argument( + "repository", + help="The GitHub org and repository name: ORG/REPO", + ) + parser.add_argument( + "output", + type=Path, + help="Path of write switcher.json to", + ) + args = parser.parse_args(args) + + # Write the versions file + versions = get_versions("origin/gh-pages", args.add) + write_json(args.output, args.repository, versions) + + +if __name__ == "__main__": + main() diff --git a/.github/workflows/_check.yml b/.github/workflows/_check.yml new file mode 100644 index 00000000..a6139c19 --- /dev/null +++ b/.github/workflows/_check.yml @@ -0,0 +1,27 @@ +on: + workflow_call: + outputs: + branch-pr: + description: The PR number if the branch is in one + value: ${{ jobs.pr.outputs.branch-pr }} + +jobs: + pr: + runs-on: "ubuntu-latest" + outputs: + branch-pr: ${{ steps.script.outputs.result }} + steps: + - uses: actions/github-script@v7 + id: script + if: github.event_name == 'push' + with: + script: | + const prs = await github.rest.pulls.list({ + owner: context.repo.owner, + repo: context.repo.repo, + head: context.repo.owner + ':${{ github.ref_name }}' + }) + if (prs.data.length) { + console.log(`::notice ::Skipping CI on branch push as it is already run in PR #${prs.data[0]["number"]}`) + return prs.data[0]["number"] + } diff --git a/.github/workflows/_container.yml b/.github/workflows/_container.yml new file mode 100644 index 00000000..4857ee9e --- /dev/null +++ b/.github/workflows/_container.yml @@ -0,0 +1,56 @@ +on: + workflow_call: + +jobs: + build: + runs-on: ubuntu-latest + + steps: + - name: Checkout + uses: actions/checkout@v4 + with: + # Need this to get version number from last tag + fetch-depth: 0 + + - name: Set up Docker Buildx + id: buildx + uses: docker/setup-buildx-action@v3 + + - name: Log in to GitHub Docker Registry + if: github.event_name != 'pull_request' + uses: docker/login-action@v3 + with: + registry: ghcr.io + username: ${{ github.actor }} + password: ${{ secrets.GITHUB_TOKEN }} + + - name: Build and export to Docker local cache + uses: docker/build-push-action@v5 + with: + context: . + # Need load and tags so we can test it below + load: true + tags: tag_for_testing + + - name: Test cli works in cached runtime image + run: docker run --rm tag_for_testing --version + + - name: Create tags for publishing image + id: meta + uses: docker/metadata-action@v5 + with: + images: ghcr.io/${{ github.repository }} + tags: | + type=ref,event=tag + type=raw,value=latest + + - name: Push cached image to container registry + if: github.ref_type == 'tag' + uses: docker/build-push-action@v5 + # This does not build the image again, it will find the image in the + # Docker cache and publish it + with: + context: . + push: true + tags: ${{ steps.meta.outputs.tags }} + labels: ${{ steps.meta.outputs.labels }} diff --git a/.github/workflows/_dist.yml b/.github/workflows/_dist.yml new file mode 100644 index 00000000..b1c4c93c --- /dev/null +++ b/.github/workflows/_dist.yml @@ -0,0 +1,36 @@ +on: + workflow_call: + +jobs: + build: + runs-on: "ubuntu-latest" + + steps: + - name: Checkout + uses: actions/checkout@v4 + with: + # Need this to get version number from last tag + fetch-depth: 0 + + - name: Build sdist and wheel + run: > + export SOURCE_DATE_EPOCH=$(git log -1 --pretty=%ct) && + pipx run build + + - name: Upload sdist and wheel as artifacts + uses: actions/upload-artifact@v4 + with: + name: dist + path: dist + + - name: Check for packaging errors + run: pipx run twine check --strict dist/* + + - name: Install produced wheel + uses: ./.github/actions/install_requirements + with: + pip-install: dist/*.whl + + - name: Test module --version works using the installed wheel + # If more than one module in src/ replace with module name to test + run: python -m $(ls --hide='*.egg-info' src | head -1) --version diff --git a/.github/workflows/_docs.yml b/.github/workflows/_docs.yml new file mode 100644 index 00000000..a1cafcae --- /dev/null +++ b/.github/workflows/_docs.yml @@ -0,0 +1,54 @@ +on: + workflow_call: + +jobs: + build: + runs-on: ubuntu-latest + + steps: + - name: Avoid git conflicts when tag and branch pushed at same time + if: github.ref_type == 'tag' + run: sleep 60 + + - name: Checkout + uses: actions/checkout@v4 + with: + # Need this to get version number from last tag + fetch-depth: 0 + + - name: Install system packages + run: sudo apt-get install graphviz + + - name: Install python packages + uses: ./.github/actions/install_requirements + + - name: Build docs + run: tox -e docs + + - name: Remove environment.pickle + run: rm build/html/.doctrees/environment.pickle + + - name: Upload built docs artifact + uses: actions/upload-artifact@v4 + with: + name: docs + path: build + + - name: Sanitize ref name for docs version + run: echo "DOCS_VERSION=${GITHUB_REF_NAME//[^A-Za-z0-9._-]/_}" >> $GITHUB_ENV + + - name: Move to versioned directory + run: mv build/html .github/pages/$DOCS_VERSION + + - name: Write switcher.json + run: python .github/pages/make_switcher.py --add $DOCS_VERSION ${{ github.repository }} .github/pages/switcher.json + + - name: Publish Docs to gh-pages + if: github.ref_type == 'tag' || github.ref_name == 'main' + # We pin to the SHA, not the tag, for security reasons. + # https://docs.github.com/en/actions/learn-github-actions/security-hardening-for-github-actions#using-third-party-actions + uses: peaceiris/actions-gh-pages@4f9cc6602d3f66b9c108549d475ec49e8ef4d45e # v4.0.0 + with: + github_token: ${{ secrets.GITHUB_TOKEN }} + publish_dir: .github/pages + keep_files: true diff --git a/.github/workflows/_pypi.yml b/.github/workflows/_pypi.yml new file mode 100644 index 00000000..8032bbaa --- /dev/null +++ b/.github/workflows/_pypi.yml @@ -0,0 +1,19 @@ +on: + workflow_call: + +jobs: + upload: + runs-on: ubuntu-latest + environment: release + + steps: + - name: Download dist artifact + uses: actions/download-artifact@v4 + with: + name: dist + path: dist + + - name: Publish to PyPI using trusted publishing + uses: pypa/gh-action-pypi-publish@release/v1 + with: + attestations: false diff --git a/.github/workflows/_release.yml b/.github/workflows/_release.yml new file mode 100644 index 00000000..e55efdb3 --- /dev/null +++ b/.github/workflows/_release.yml @@ -0,0 +1,32 @@ +on: + workflow_call: + +jobs: + artifacts: + runs-on: ubuntu-latest + + steps: + - name: Download artifacts + uses: actions/download-artifact@v4 + with: + merge-multiple: true + + - name: Zip up docs + run: | + set -vxeuo pipefail + if [ -d html ]; then + mv html $GITHUB_REF_NAME + zip -r docs.zip $GITHUB_REF_NAME + rm -rf $GITHUB_REF_NAME + fi + + - name: Create GitHub Release + # We pin to the SHA, not the tag, for security reasons. + # https://docs.github.com/en/actions/learn-github-actions/security-hardening-for-github-actions#using-third-party-actions + uses: softprops/action-gh-release@9d7c94cfd0a1f3ed45544c887983e9fa900f0564 # v2.0.4 + with: + prerelease: ${{ contains(github.ref_name, 'a') || contains(github.ref_name, 'b') || contains(github.ref_name, 'rc') }} + files: "*" + generate_release_notes: true + env: + GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }} diff --git a/.github/workflows/_test.yml b/.github/workflows/_test.yml new file mode 100644 index 00000000..f652d414 --- /dev/null +++ b/.github/workflows/_test.yml @@ -0,0 +1,62 @@ +on: + workflow_call: + inputs: + python-version: + type: string + description: The version of python to install + required: true + runs-on: + type: string + description: The runner to run this job on + required: true + secrets: + CODECOV_TOKEN: + required: true + +env: + # https://github.com/pytest-dev/pytest/issues/2042 + PY_IGNORE_IMPORTMISMATCH: "1" + +jobs: + run: + runs-on: ${{ inputs.runs-on }} + + steps: + - name: Checkout + uses: actions/checkout@v4 + with: + # Need this to get version number from last tag + fetch-depth: 0 + + - if: inputs.python-version == 'dev' + name: Install dev versions of python packages + uses: ./.github/actions/install_requirements + + - if: inputs.python-version == 'dev' + name: Write the requirements as an artifact + run: pip freeze --exclude-editable > /tmp/dev-requirements.txt + + - if: inputs.python-version == 'dev' + name: Upload dev-requirements.txt + uses: actions/upload-artifact@v4 + with: + name: dev-requirements + path: /tmp/dev-requirements.txt + + - if: inputs.python-version != 'dev' + name: Install latest versions of python packages + uses: ./.github/actions/install_requirements + with: + python-version: ${{ inputs.python-version }} + pip-install: ".[dev]" + + - name: Run tests + run: tox -e tests + + - name: Upload coverage to Codecov + uses: codecov/codecov-action@v4 + with: + name: ${{ inputs.python-version }}/${{ inputs.runs-on }} + files: cov.xml + env: + CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} diff --git a/.github/workflows/_tox.yml b/.github/workflows/_tox.yml new file mode 100644 index 00000000..a13536d3 --- /dev/null +++ b/.github/workflows/_tox.yml @@ -0,0 +1,22 @@ +on: + workflow_call: + inputs: + tox: + type: string + description: What to run under tox + required: true + + +jobs: + run: + runs-on: "ubuntu-latest" + + steps: + - name: Checkout + uses: actions/checkout@v4 + + - name: Install python packages + uses: ./.github/actions/install_requirements + + - name: Run tox + run: tox -e ${{ inputs.tox }} diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml new file mode 100644 index 00000000..752ca8c7 --- /dev/null +++ b/.github/workflows/ci.yml @@ -0,0 +1,54 @@ +name: CI + +on: + push: + pull_request: + +jobs: + check: + uses: ./.github/workflows/_check.yml + + lint: + needs: check + if: needs.check.outputs.branch-pr == '' + uses: ./.github/workflows/_tox.yml + with: + tox: pre-commit,type-checking + + test: + needs: check + if: needs.check.outputs.branch-pr == '' + strategy: + matrix: + runs-on: ["ubuntu-latest"] # can add windows-latest, macos-latest + python-version: ["3.8", "3.9", "3.10", "3.11"] + include: + # Include one that runs in the dev environment + - runs-on: "ubuntu-latest" + python-version: "dev" + fail-fast: false + uses: ./.github/workflows/_test.yml + with: + runs-on: ${{ matrix.runs-on }} + python-version: ${{ matrix.python-version }} + secrets: + CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} + + container: + needs: check + if: needs.check.outputs.branch-pr == '' + uses: ./.github/workflows/_container.yml + permissions: + packages: write + + dist: + needs: check + if: needs.check.outputs.branch-pr == '' + uses: ./.github/workflows/_dist.yml + + release: + if: github.ref_type == 'tag' + needs: [dist] + uses: ./.github/workflows/_release.yml + permissions: + contents: write diff --git a/.github/workflows/periodic.yml b/.github/workflows/periodic.yml new file mode 100644 index 00000000..e2a0fd1b --- /dev/null +++ b/.github/workflows/periodic.yml @@ -0,0 +1,13 @@ +name: Periodic + +on: + workflow_dispatch: + schedule: + # Run weekly to check URL links still resolve + - cron: "0 8 * * WED" + +jobs: + linkcheck: + uses: ./.github/workflows/_tox.yml + with: + tox: docs build -- -b linkcheck diff --git a/.gitignore b/.gitignore index 1cc17f6a..2593ec75 100644 --- a/.gitignore +++ b/.gitignore @@ -1,38 +1,70 @@ -# Compiled Object files -*.slo -*.lo -*.o -*.obj +# Byte-compiled / optimized / DLL files +__pycache__/ +*.py[cod] -# Compiled Dynamic libraries +# C extensions *.so -*.dylib -*.dll - -# Compiled Static libraries -*.lai -*.la -*.a -*.lib - -# Executables -*.exe -*.out -*.app - -# Build directory -O.* - -# Installed files -/bin -/include -/lib -/dbd -/db -/data -/iocs/example -/iocs/example_sim -/documentation - -/venv -/.vscode + +# Distribution / packaging +.Python +env/ +build/ +develop-eggs/ +dist/ +downloads/ +eggs/ +.eggs/ +lib/ +lib64/ +parts/ +sdist/ +var/ +*.egg-info/ +.installed.cfg +*.egg +**/_version.py + +# PyInstaller +# Usually these files are written by a python script from a template +# before PyInstaller builds the exe, so as to inject date/other infos into it. +*.manifest +*.spec + +# Installer logs +pip-log.txt +pip-delete-this-directory.txt + +# Unit test / coverage reports +htmlcov/ +.tox/ +.coverage +.coverage.* +.cache +nosetests.xml +coverage.xml +cov.xml +.pytest_cache/ +.mypy_cache/ + +# Translations +*.mo +*.pot + +# Django stuff: +*.log + +# Sphinx documentation +docs/_build/ + +# PyBuilder +target/ + +# likely venv names +.venv* +venv* + +# further build artifacts +lockfiles/ + +# ruff cache +.ruff_cache/ diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml new file mode 100644 index 00000000..5a4cbf7b --- /dev/null +++ b/.pre-commit-config.yaml @@ -0,0 +1,23 @@ +repos: + - repo: https://github.com/pre-commit/pre-commit-hooks + rev: v4.5.0 + hooks: + - id: check-added-large-files + - id: check-yaml + - id: check-merge-conflict + + - repo: local + hooks: + - id: ruff + name: lint with ruff + language: system + entry: ruff check --force-exclude + types: [python] + require_serial: true + + - id: ruff-format + name: format with ruff + language: system + entry: ruff format --force-exclude + types: [python] + require_serial: true diff --git a/.vscode/extensions.json b/.vscode/extensions.json new file mode 100644 index 00000000..66ad6324 --- /dev/null +++ b/.vscode/extensions.json @@ -0,0 +1,5 @@ +{ + "recommendations": [ + "ms-vscode-remote.remote-containers", + ] +} \ No newline at end of file diff --git a/.vscode/launch.json b/.vscode/launch.json new file mode 100644 index 00000000..36d8f503 --- /dev/null +++ b/.vscode/launch.json @@ -0,0 +1,23 @@ +{ + // Use IntelliSense to learn about possible attributes. + // Hover to view descriptions of existing attributes. + // For more information, visit: https://go.microsoft.com/fwlink/?linkid=830387 + "version": "0.2.0", + "configurations": [ + { + "name": "Debug Unit Test", + "type": "debugpy", + "request": "launch", + "justMyCode": false, + "program": "${file}", + "purpose": [ + "debug-test" + ], + "console": "integratedTerminal", + "env": { + // Enable break on exception when debugging tests (see: tests/conftest.py) + "PYTEST_RAISE": "1", + }, + } + ] +} diff --git a/.vscode/settings.json b/.vscode/settings.json new file mode 100644 index 00000000..c129d991 --- /dev/null +++ b/.vscode/settings.json @@ -0,0 +1,11 @@ +{ + "python.testing.unittestEnabled": false, + "python.testing.pytestEnabled": true, + "editor.formatOnSave": true, + "editor.codeActionsOnSave": { + "source.organizeImports": "explicit" + }, + "[python]": { + "editor.defaultFormatter": "charliermarsh.ruff", + }, +} \ No newline at end of file diff --git a/.vscode/tasks.json b/.vscode/tasks.json new file mode 100644 index 00000000..946e69d4 --- /dev/null +++ b/.vscode/tasks.json @@ -0,0 +1,16 @@ +// See https://go.microsoft.com/fwlink/?LinkId=733558 +// for the documentation about the tasks.json format +{ + "version": "2.0.0", + "tasks": [ + { + "type": "shell", + "label": "Tests, lint and docs", + "command": "tox -p", + "options": { + "cwd": "${workspaceRoot}" + }, + "problemMatcher": [], + } + ] +} \ No newline at end of file diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 00000000..146ace10 --- /dev/null +++ b/Dockerfile @@ -0,0 +1,29 @@ +# The devcontainer should use the developer target and run as root with podman +# or docker with user namespaces. +ARG PYTHON_VERSION=3.12 +FROM python:${PYTHON_VERSION} as developer + +# Add any system dependencies for the developer/build environment here +RUN apt-get update && apt-get install -y --no-install-recommends \ + graphviz \ + && rm -rf /var/lib/apt/lists/* + +# Set up a virtual environment and put it in PATH +RUN python -m venv /venv +ENV PATH=/venv/bin:$PATH + +# The build stage installs the context into the venv +FROM developer as build +COPY . /context +WORKDIR /context +RUN pip install . + +# The runtime stage copies the built venv into a slim runtime container +FROM python:${PYTHON_VERSION}-slim as runtime +# Add apt-get system dependecies for runtime here if needed +COPY --from=build /venv/ /venv/ +ENV PATH=/venv/bin:$PATH + +# change this entrypoint if it is not the same as the repo +ENTRYPOINT ["phoebus-guibuilder"] +CMD ["--version"] diff --git a/LICENSE b/LICENSE index 261eeb9e..8dada3ed 100644 --- a/LICENSE +++ b/LICENSE @@ -178,7 +178,7 @@ APPENDIX: How to apply the Apache License to your work. To apply the Apache License to your work, attach the following - boilerplate notice, with the fields enclosed by brackets "[]" + boilerplate notice, with the fields enclosed by brackets "{}" replaced with your own identifying information. (Don't include the brackets!) The text should be enclosed in the appropriate comment syntax for the file format. We also recommend that a @@ -186,7 +186,7 @@ same "printed page" as the copyright notice for easier identification within third-party archives. - Copyright [yyyy] [name of copyright owner] + Copyright {yyyy} {name of copyright owner} Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. diff --git a/README.md b/README.md new file mode 100644 index 00000000..7847e867 --- /dev/null +++ b/README.md @@ -0,0 +1,32 @@ +[![CI](https://github.com/DiamondLightSource/phoebus-guibuilder/actions/workflows/ci.yml/badge.svg)](https://github.com/DiamondLightSource/phoebus-guibuilder/actions/workflows/ci.yml) +[![Coverage](https://codecov.io/gh/DiamondLightSource/phoebus-guibuilder/branch/main/graph/badge.svg)](https://codecov.io/gh/DiamondLightSource/phoebus-guibuilder) + +[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0) + +# phoebus_guibuilder + +A package for building GUIs + +This is where you should write a short paragraph that describes what your module does, +how it does it, and why people should use it. + +Source | +:---: | :---: +Docker | `docker run ghcr.io/diamondlightsource/phoebus-guibuilder:latest` +Releases | + +This is where you should put some images or code snippets that illustrate +some relevant examples. If it is a library then you might put some +introductory code here: + +```python +from phoebus_guibuilder import __version__ + +print(f"Hello phoebus_guibuilder {__version__}") +``` + +Or if it is a commandline tool then you might put some example commands here: + +``` +python -m phoebus_guibuilder --version +``` diff --git a/catalog-info.yaml b/catalog-info.yaml new file mode 100644 index 00000000..6e0cf25c --- /dev/null +++ b/catalog-info.yaml @@ -0,0 +1,10 @@ +apiVersion: backstage.io/v1alpha1 +kind: Component +metadata: + name: phoebus-guibuilder + title: phoebus-guibuilder + description: A package for building GUIs +spec: + type: documentation + lifecycle: experimental + owner: group:default/sscc \ No newline at end of file diff --git a/create_gui.yaml b/example/create_gui.yaml similarity index 100% rename from create_gui.yaml rename to example/create_gui.yaml diff --git a/pyproject.toml b/pyproject.toml index 16cb1733..fcb6d31a 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,14 +1,134 @@ -[tool.poetry] -name = "guibuilder" +[project] +dependencies = ["python", "pyyaml"] +urls = { github = "https://github.com/DiamondLightSource/phoebus-guibuilder" } +name = "phoebus-guibuilder" version = "0.1.0" description = "A package for building GUIs" -authors = ["Oliver Copping "] -license = "Apache-2.0" - -[tool.poetry.dependencies] -python = "^3.10" -pyyaml = "^6.0.2" +classifiers = [ + "Development Status :: 3 - Alpha", + "License :: OSI Approved :: BSD License", + "Programming Language :: Python :: 3.12", +] +authors = [ + { name = "Oliver Copping", email = "oliver.copping@diamond.ac.uk" }, + { name = "Adedamola Sode", email = "adedamola.sode@diamond.ac.uk" }, +] +license = "LICENCE.file" +readme = "README.md" +requires-python = ">=3.12" [build-system] -requires = ["poetry-core>=1.0.0"] -build-backend = "poetry.core.masonry.api" \ No newline at end of file +requires = ["poetry-core>=2.0.0", "pyyaml>=6.0.2"] +build-backend = "poetry.core.masonry.api" + +[tool.setuptools_scm] +version_file = "src/phoebus_guibuilder/_version.py" + +[tool.pyright] +typeCheckingMode = "standard" +reportMissingImports = false # Ignore missing stubs in imported modules + +[tool.pytest.ini_options] +# Run pytest with all our checkers, and don't spam us with massive tracebacks on error +addopts = """ + --tb=native -vv --strict-markers --doctest-modules + --doctest-glob="*.rst" --doctest-glob="*.md" + --ignore=docs/examples --ignore=src/phoebus_guibuilder/epics/signal.py + """ +# https://iscinumpy.gitlab.io/post/bound-version-constraints/#watch-for-warnings +filterwarnings = "error" +# Doctest python code in docs, python code in src docstrings, test functions in tests +testpaths = "docs src tests" +log_format = "%(asctime)s,%(msecs)03d %(levelname)s (%(threadName)s) %(message)s" +log_date_format = "%H:%M:%S" + +markers = [ + "motorsim: require the motorsim IOC to be running", + "adsim: require the ADsim IOC to be running", +] +asyncio_mode = "auto" +asyncio_default_fixture_loop_scope = "function" + +[tool.coverage.run] +data_file = "/tmp/phoebus_guibuilder.coverage" + +[tool.coverage.paths] +# Tests are run from installed location, map back to the src directory +source = ["src", "**/site-packages/"] + +# tox must currently be configured via an embedded ini string +# See: https://github.com/tox-dev/tox/issues/999 +[tool.tox] +legacy_tox_ini = """ +[tox] +skipsdist=True + +[testenv:{pre-commit,type-checking,tests,docs}] +# Don't create a virtualenv for the command, requires tox-direct plugin +direct = True +passenv = * +allowlist_externals = + pytest + pre-commit + pyright + sphinx-build + sphinx-autobuild +commands = + pre-commit: pre-commit run --all-files --show-diff-on-failure {posargs} + type-checking: pyright src {posargs} + tests: pytest --cov=phoebus_guibuilder --cov-report term --cov-report xml:cov.xml {posargs} + docs: sphinx-{posargs:build -EW --keep-going} -T docs build/html +""" + +[tool.ruff] +src = ["src", "tests", "system_tests"] +line-length = 88 +lint.select = [ + "B", # flake8-bugbear - https://docs.astral.sh/ruff/rules/#flake8-bugbear-b + "C4", # flake8-comprehensions - https://docs.astral.sh/ruff/rules/#flake8-comprehensions-c4 + "E", # pycodestyle errors - https://docs.astral.sh/ruff/rules/#error-e + "F", # pyflakes rules - https://docs.astral.sh/ruff/rules/#pyflakes-f + "W", # pycodestyle warnings - https://docs.astral.sh/ruff/rules/#warning-w + "I", # isort - https://docs.astral.sh/ruff/rules/#isort-i + "UP", # pyupgrade - https://docs.astral.sh/ruff/rules/#pyupgrade-up + "SLF", # self - https://docs.astral.sh/ruff/settings/#lintflake8-self + "PLC2701", # private import - https://docs.astral.sh/ruff/rules/import-private-name/ + "LOG015", # root logger call - https://docs.astral.sh/ruff/rules/root-logger-call/ + "S101", # assert = https://docs.astral.sh/ruff/rules/assert/ +] +lint.ignore = [ + "B901", # Return in a generator is needed for plans +] +lint.preview = true # so that preview mode PLC2701 is enabled + +[tool.ruff.lint.per-file-ignores] +# By default, private member access is allowed in tests +# See https://github.com/DiamondLightSource/python-copier-template/issues/154 +# Remove this line to forbid private member access in tests +"tests/**/*" = ["SLF001", "S101"] +"src/phoebus_guibuilder/testing/**/*" = ["SLF001", "S101"] +"system_tests/**/*" = ["SLF001", "S101"] +"docs/examples/**/*" = ["SLF001", "S101"] + + +[tool.importlinter] +root_package = "phoebus_guibuilder" + +[[tool.importlinter.contracts]] +name = "All runtime modules are in layers" +type = "layers" +containers = ["phoebus_guibuilder"] +layers = ["plan_stubs", "fastcs", "epics | tango | sim", "core"] +exhaustive = true +exhaustive_ignores = ["testing", "_version", "__main__"] + +[[tool.importlinter.contracts]] +name = "Testing and sim modules are not used at runtime" +type = "forbidden" +forbidden_modules = ["phoebus_guibuilder.testing", "phoebus_guibuilder.sim"] +source_modules = [ + "phoebus_guibuilder.plan_stubs", + "phoebus_guibuilder.fast.*", + "phoebus_guibuilder.epics", + "phoebus_guibuilder.tango", +] diff --git a/src/phoebus_guibuilder/__init__.py b/src/phoebus_guibuilder/__init__.py new file mode 100644 index 00000000..26d23bad --- /dev/null +++ b/src/phoebus_guibuilder/__init__.py @@ -0,0 +1,3 @@ +from ._version import __version__ + +__all__ = ["__version__"] diff --git a/src/phoebus_guibuilder/__main__.py b/src/phoebus_guibuilder/__main__.py new file mode 100644 index 00000000..b6eb622f --- /dev/null +++ b/src/phoebus_guibuilder/__main__.py @@ -0,0 +1,16 @@ +from argparse import ArgumentParser + +from . import __version__ + +__all__ = ["main"] + + +def main(args=None): + parser = ArgumentParser() + parser.add_argument("-v", "--version", action="version", version=__version__) + args = parser.parse_args(args) + + +# test with: python -m phoebus_guibuilder +if __name__ == "__main__": + main() diff --git a/src/phoebus_guibuilder/guibuilder.py b/src/phoebus_guibuilder/guibuilder.py new file mode 100644 index 00000000..75404249 --- /dev/null +++ b/src/phoebus_guibuilder/guibuilder.py @@ -0,0 +1,83 @@ +import pprint +import re +from dataclasses import dataclass +from typing import Dict +from warnings import warn + +import yaml + +pp = pprint.PrettyPrinter() + + +@dataclass +class Beamline: + dom: str + desc: str + + +@dataclass +class Component: + name: str + desc: str + prefix: str + filename: str | None = None + + def __post_init__(self): + self._extract_p_and_r() + + def __repr__(self) -> str: + return f"Component(name={self.name}, desc={self.desc}, prefix={self.P}, suffix={self.R}, filename={self.filename})" + + def _extract_p_and_r(self): + pattern = re.compile( + r""" + ^ # start of string + (?= # lookahead to ensure the following pattern matches + [A-Za-z0-9-]{14,16} # match 14 to 16 alphanumeric characters or hyphens + [:A-Za-z0-9]* # match zero or more colons or alphanumeric characters + [.A-Za-z0-9] # match a dot or alphanumeric character + ) + (?!.*--) # negative lookahead to ensure no double hyphens + (?!.*:\..) # negative lookahead to ensure no colon followed by a dot + ( # start of capture group 1 + (?:[A-Za-z0-9]{2,5}-){3} # match 2 to 5 alphanumeric characters followed by a hyphen, repeated 3 times + [\d]* # match zero or more digits + [^:]? # match zero or one non-colon character + ) + (?::([a-zA-Z0-9:]*))? # match zero or one colon followed by zero or more alphanumeric characters or colons (capture group 2) + (?:\.([a-zA-Z0-9]+))? # match zero or one dot followed by one or more alphanumeric characters (capture group 3) + $ # end of string + """, + re.VERBOSE, + ) + + match = re.match(pattern, self.prefix) + if match: + self.P: str = match.group(1) + self.R: str = match.group(2) + # TODO: Is this needed? + self.attribute: str | None = match.group(3) + else: + warn(f"No valid PV prefix found for {self.name}.") + exit() + + +components: list[Component] = [] + +with open("create_gui.yaml", "r") as f: + conf = yaml.safe_load(f) + + bl: dict[str, str] = conf["beamline"] + comps: dict[str, dict[str, str]] = conf["components"] + + beamline = Beamline(**bl) + + for key, comp in comps.items(): + components.append(Component(key, **comp)) + +print("BEAMLINE:") +pp.pprint(beamline) + +print("") +print("COMPONENTS") +pp.pprint(components) diff --git a/tests/conftest.py b/tests/conftest.py new file mode 100644 index 00000000..d5cdd5f7 --- /dev/null +++ b/tests/conftest.py @@ -0,0 +1,15 @@ +import os + +import pytest + +# Prevent pytest from catching exceptions when debugging in vscode so that break on +# exception works correctly (see: https://github.com/pytest-dev/pytest/issues/7409) +if os.getenv("PYTEST_RAISE", "0") == "1": + + @pytest.hookimpl(tryfirst=True) + def pytest_exception_interact(call): + raise call.excinfo.value + + @pytest.hookimpl(tryfirst=True) + def pytest_internalerror(excinfo): + raise excinfo.value diff --git a/tests/test_cli.py b/tests/test_cli.py new file mode 100644 index 00000000..9416de66 --- /dev/null +++ b/tests/test_cli.py @@ -0,0 +1,9 @@ +import subprocess +import sys + +from phoebus_guibuilder import __version__ + + +def test_cli_version(): + cmd = [sys.executable, "-m", "phoebus_guibuilder", "--version"] + assert subprocess.check_output(cmd).decode().strip() == __version__ From 21afbf345b26873c4237c401ec06b934ce54816c Mon Sep 17 00:00:00 2001 From: Ollie Copping Date: Wed, 5 Feb 2025 09:13:05 +0000 Subject: [PATCH 2/4] update to use minimum of python 3.12 in ci --- .github/workflows/ci.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 752ca8c7..5c528d5e 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -21,7 +21,7 @@ jobs: strategy: matrix: runs-on: ["ubuntu-latest"] # can add windows-latest, macos-latest - python-version: ["3.8", "3.9", "3.10", "3.11"] + python-version: ["3.12"] include: # Include one that runs in the dev environment - runs-on: "ubuntu-latest" @@ -45,7 +45,7 @@ jobs: needs: check if: needs.check.outputs.branch-pr == '' uses: ./.github/workflows/_dist.yml - + release: if: github.ref_type == 'tag' needs: [dist] From af607b1b9c4d0093db4a3f39ffdbea46a1a97ab5 Mon Sep 17 00:00:00 2001 From: Ollie Copping Date: Wed, 5 Feb 2025 09:15:49 +0000 Subject: [PATCH 3/4] Updated copier template used --- .copier-answers.yml | 4 +- .devcontainer/devcontainer.json | 10 ++-- .github/CONTRIBUTING.md | 2 +- .../pull_request_template.md | 1 - .github/pages/index.html | 2 +- .github/pages/make_switcher.py | 25 ++++----- .github/workflows/_container.yml | 8 ++- .github/workflows/_release.yml | 2 +- .github/workflows/ci.yml | 1 + .gitignore | 1 + .pre-commit-config.yaml | 1 + .vscode/extensions.json | 2 +- .vscode/settings.json | 3 +- .vscode/tasks.json | 2 +- Dockerfile | 6 +-- README.md | 2 +- catalog-info.yaml | 4 +- pyproject.toml | 51 ++++--------------- src/phoebus_guibuilder/__init__.py | 8 +++ src/phoebus_guibuilder/__main__.py | 16 ++++-- tests/conftest.py | 12 +++-- 21 files changed, 81 insertions(+), 82 deletions(-) diff --git a/.copier-answers.yml b/.copier-answers.yml index d83b1628..9fd646b2 100644 --- a/.copier-answers.yml +++ b/.copier-answers.yml @@ -1,9 +1,11 @@ # Changes here will be overwritten by Copier -_commit: 2.1.0 +_commit: 2.6.0 _src_path: gh:DiamondLightSource/python-copier-template author_email: oliver.copping@diamond.ac.uk author_name: Oliver Copping +component_lifecycle: experimental component_owner: group:default/sscc +component_type: library description: A package for building GUIs distribution_name: phoebus-guibuilder docker: true diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json index 79b85ff4..979a89ce 100644 --- a/.devcontainer/devcontainer.json +++ b/.devcontainer/devcontainer.json @@ -28,11 +28,11 @@ } }, "features": { - // Some default things like git config - "ghcr.io/devcontainers/features/common-utils:2": { - "upgradePackages": false - } + // add in eternal history and other bash features + "ghcr.io/diamondlightsource/devcontainer-features/bash-config:1.0.0": {} }, + // Create the config folder for the bash-config feature + "initializeCommand": "mkdir -p ${localEnv:HOME}/.config/bash-config", "runArgs": [ // Allow the container to access the host X11 display and EPICS CA "--net=host", @@ -43,4 +43,4 @@ "workspaceMount": "source=${localWorkspaceFolder}/..,target=/workspaces,type=bind", // After the container is created, install the python project in editable form "postCreateCommand": "pip install $([ -f dev-requirements.txt ] && echo '-c dev-requirements.txt') -e '.[dev]' && pre-commit install" -} \ No newline at end of file +} diff --git a/.github/CONTRIBUTING.md b/.github/CONTRIBUTING.md index ad5bce2d..8f57a6fb 100644 --- a/.github/CONTRIBUTING.md +++ b/.github/CONTRIBUTING.md @@ -24,4 +24,4 @@ It is recommended that developers use a [vscode devcontainer](https://code.visua This project was created using the [Diamond Light Source Copier Template](https://github.com/DiamondLightSource/python-copier-template) for Python projects. -For more information on common tasks like setting up a developer environment, running the tests, and setting a pre-commit hook, see the template's [How-to guides](https://diamondlightsource.github.io/python-copier-template/2.1.0/how-to.html). +For more information on common tasks like setting up a developer environment, running the tests, and setting a pre-commit hook, see the template's [How-to guides](https://diamondlightsource.github.io/python-copier-template/2.6.0/how-to.html). diff --git a/.github/PULL_REQUEST_TEMPLATE/pull_request_template.md b/.github/PULL_REQUEST_TEMPLATE/pull_request_template.md index de9aefe9..8200afe5 100644 --- a/.github/PULL_REQUEST_TEMPLATE/pull_request_template.md +++ b/.github/PULL_REQUEST_TEMPLATE/pull_request_template.md @@ -6,4 +6,3 @@ Fixes #ISSUE ### Checks for reviewer - [ ] Would the PR title make sense to a user on a set of release notes - diff --git a/.github/pages/index.html b/.github/pages/index.html index 80f0a009..c495f39f 100644 --- a/.github/pages/index.html +++ b/.github/pages/index.html @@ -8,4 +8,4 @@ - \ No newline at end of file + diff --git a/.github/pages/make_switcher.py b/.github/pages/make_switcher.py index 0babd3c6..c06813af 100755 --- a/.github/pages/make_switcher.py +++ b/.github/pages/make_switcher.py @@ -1,30 +1,32 @@ +"""Make switcher.json to allow docs to switch between different versions.""" + import json import logging from argparse import ArgumentParser from pathlib import Path from subprocess import CalledProcessError, check_output -from typing import List, Optional -def report_output(stdout: bytes, label: str) -> List[str]: +def report_output(stdout: bytes, label: str) -> list[str]: + """Print and return something received frm stdout.""" ret = stdout.decode().strip().split("\n") print(f"{label}: {ret}") return ret -def get_branch_contents(ref: str) -> List[str]: +def get_branch_contents(ref: str) -> list[str]: """Get the list of directories in a branch.""" stdout = check_output(["git", "ls-tree", "-d", "--name-only", ref]) return report_output(stdout, "Branch contents") -def get_sorted_tags_list() -> List[str]: +def get_sorted_tags_list() -> list[str]: """Get a list of sorted tags in descending order from the repository.""" stdout = check_output(["git", "tag", "-l", "--sort=-v:refname"]) return report_output(stdout, "Tags list") -def get_versions(ref: str, add: Optional[str]) -> List[str]: +def get_versions(ref: str, add: str | None) -> list[str]: """Generate the file containing the list of all GitHub Pages builds.""" # Get the directories (i.e. builds) from the GitHub Pages branch try: @@ -41,7 +43,7 @@ def get_versions(ref: str, add: Optional[str]) -> List[str]: tags = get_sorted_tags_list() # Make the sorted versions list from main branches and tags - versions: List[str] = [] + versions: list[str] = [] for version in ["master", "main"] + tags: if version in builds: versions.append(version) @@ -53,14 +55,12 @@ def get_versions(ref: str, add: Optional[str]) -> List[str]: return versions -def write_json(path: Path, repository: str, versions: str): +def write_json(path: Path, repository: str, versions: list[str]): + """Write the JSON switcher to path.""" org, repo_name = repository.split("/") - pages_url = f"https://{org}.github.io" - if repo_name != f"{org}.github.io": - # Only add the repo name if it isn't the source for the org pages site - pages_url += f"/{repo_name}" struct = [ - {"version": version, "url": f"{pages_url}/{version}/"} for version in versions + {"version": version, "url": f"https://{org}.github.io/{repo_name}/{version}/"} + for version in versions ] text = json.dumps(struct, indent=2) print(f"JSON switcher:\n{text}") @@ -68,6 +68,7 @@ def write_json(path: Path, repository: str, versions: str): def main(args=None): + """Parse args and write switcher.""" parser = ArgumentParser( description="Make a versions.json file from gh-pages directories" ) diff --git a/.github/workflows/_container.yml b/.github/workflows/_container.yml index 4857ee9e..da5e4936 100644 --- a/.github/workflows/_container.yml +++ b/.github/workflows/_container.yml @@ -25,7 +25,9 @@ jobs: password: ${{ secrets.GITHUB_TOKEN }} - name: Build and export to Docker local cache - uses: docker/build-push-action@v5 + uses: docker/build-push-action@v6 + env: + DOCKER_BUILD_RECORD_UPLOAD: false with: context: . # Need load and tags so we can test it below @@ -46,7 +48,9 @@ jobs: - name: Push cached image to container registry if: github.ref_type == 'tag' - uses: docker/build-push-action@v5 + uses: docker/build-push-action@v6 + env: + DOCKER_BUILD_RECORD_UPLOAD: false # This does not build the image again, it will find the image in the # Docker cache and publish it with: diff --git a/.github/workflows/_release.yml b/.github/workflows/_release.yml index e55efdb3..81b62643 100644 --- a/.github/workflows/_release.yml +++ b/.github/workflows/_release.yml @@ -23,7 +23,7 @@ jobs: - name: Create GitHub Release # We pin to the SHA, not the tag, for security reasons. # https://docs.github.com/en/actions/learn-github-actions/security-hardening-for-github-actions#using-third-party-actions - uses: softprops/action-gh-release@9d7c94cfd0a1f3ed45544c887983e9fa900f0564 # v2.0.4 + uses: softprops/action-gh-release@e7a8f85e1c67a31e6ed99a94b41bd0b71bbee6b8 # v2.0.9 with: prerelease: ${{ contains(github.ref_name, 'a') || contains(github.ref_name, 'b') || contains(github.ref_name, 'rc') }} files: "*" diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 5c528d5e..35afe747 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -39,6 +39,7 @@ jobs: if: needs.check.outputs.branch-pr == '' uses: ./.github/workflows/_container.yml permissions: + contents: read packages: write dist: diff --git a/.gitignore b/.gitignore index 2593ec75..0f33bf29 100644 --- a/.gitignore +++ b/.gitignore @@ -55,6 +55,7 @@ cov.xml # Sphinx documentation docs/_build/ +docs/_api # PyBuilder target/ diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml index 5a4cbf7b..60fc23f9 100644 --- a/.pre-commit-config.yaml +++ b/.pre-commit-config.yaml @@ -5,6 +5,7 @@ repos: - id: check-added-large-files - id: check-yaml - id: check-merge-conflict + - id: end-of-file-fixer - repo: local hooks: diff --git a/.vscode/extensions.json b/.vscode/extensions.json index 66ad6324..933c580c 100644 --- a/.vscode/extensions.json +++ b/.vscode/extensions.json @@ -2,4 +2,4 @@ "recommendations": [ "ms-vscode-remote.remote-containers", ] -} \ No newline at end of file +} diff --git a/.vscode/settings.json b/.vscode/settings.json index c129d991..101c75fa 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -5,7 +5,8 @@ "editor.codeActionsOnSave": { "source.organizeImports": "explicit" }, + "files.insertFinalNewline": true, "[python]": { "editor.defaultFormatter": "charliermarsh.ruff", }, -} \ No newline at end of file +} diff --git a/.vscode/tasks.json b/.vscode/tasks.json index 946e69d4..c999e864 100644 --- a/.vscode/tasks.json +++ b/.vscode/tasks.json @@ -13,4 +13,4 @@ "problemMatcher": [], } ] -} \ No newline at end of file +} diff --git a/Dockerfile b/Dockerfile index 146ace10..c67b3480 100644 --- a/Dockerfile +++ b/Dockerfile @@ -13,13 +13,13 @@ RUN python -m venv /venv ENV PATH=/venv/bin:$PATH # The build stage installs the context into the venv -FROM developer as build +FROM developer AS build COPY . /context WORKDIR /context -RUN pip install . +RUN touch dev-requirements.txt && pip install -c dev-requirements.txt . # The runtime stage copies the built venv into a slim runtime container -FROM python:${PYTHON_VERSION}-slim as runtime +FROM python:${PYTHON_VERSION}-slim AS runtime # Add apt-get system dependecies for runtime here if needed COPY --from=build /venv/ /venv/ ENV PATH=/venv/bin:$PATH diff --git a/README.md b/README.md index 7847e867..1383f4ce 100644 --- a/README.md +++ b/README.md @@ -1,7 +1,7 @@ [![CI](https://github.com/DiamondLightSource/phoebus-guibuilder/actions/workflows/ci.yml/badge.svg)](https://github.com/DiamondLightSource/phoebus-guibuilder/actions/workflows/ci.yml) [![Coverage](https://codecov.io/gh/DiamondLightSource/phoebus-guibuilder/branch/main/graph/badge.svg)](https://codecov.io/gh/DiamondLightSource/phoebus-guibuilder) -[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://opensource.org/licenses/Apache-2.0) +[![License](https://img.shields.io/badge/License-Apache%202.0-blue.svg)](https://www.apache.org/licenses/LICENSE-2.0) # phoebus_guibuilder diff --git a/catalog-info.yaml b/catalog-info.yaml index 6e0cf25c..2c6b179a 100644 --- a/catalog-info.yaml +++ b/catalog-info.yaml @@ -5,6 +5,6 @@ metadata: title: phoebus-guibuilder description: A package for building GUIs spec: - type: documentation + type: library lifecycle: experimental - owner: group:default/sscc \ No newline at end of file + owner: group:default/sscc diff --git a/pyproject.toml b/pyproject.toml index fcb6d31a..ee7485ba 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -84,51 +84,18 @@ commands = src = ["src", "tests", "system_tests"] line-length = 88 lint.select = [ - "B", # flake8-bugbear - https://docs.astral.sh/ruff/rules/#flake8-bugbear-b - "C4", # flake8-comprehensions - https://docs.astral.sh/ruff/rules/#flake8-comprehensions-c4 - "E", # pycodestyle errors - https://docs.astral.sh/ruff/rules/#error-e - "F", # pyflakes rules - https://docs.astral.sh/ruff/rules/#pyflakes-f - "W", # pycodestyle warnings - https://docs.astral.sh/ruff/rules/#warning-w - "I", # isort - https://docs.astral.sh/ruff/rules/#isort-i - "UP", # pyupgrade - https://docs.astral.sh/ruff/rules/#pyupgrade-up - "SLF", # self - https://docs.astral.sh/ruff/settings/#lintflake8-self - "PLC2701", # private import - https://docs.astral.sh/ruff/rules/import-private-name/ - "LOG015", # root logger call - https://docs.astral.sh/ruff/rules/root-logger-call/ - "S101", # assert = https://docs.astral.sh/ruff/rules/assert/ + "B", # flake8-bugbear - https://docs.astral.sh/ruff/rules/#flake8-bugbear-b + "C4", # flake8-comprehensions - https://docs.astral.sh/ruff/rules/#flake8-comprehensions-c4 + "E", # pycodestyle errors - https://docs.astral.sh/ruff/rules/#error-e + "F", # pyflakes rules - https://docs.astral.sh/ruff/rules/#pyflakes-f + "W", # pycodestyle warnings - https://docs.astral.sh/ruff/rules/#warning-w + "I", # isort - https://docs.astral.sh/ruff/rules/#isort-i + "UP", # pyupgrade - https://docs.astral.sh/ruff/rules/#pyupgrade-up + "SLF", # self - https://docs.astral.sh/ruff/settings/#lintflake8-self ] -lint.ignore = [ - "B901", # Return in a generator is needed for plans -] -lint.preview = true # so that preview mode PLC2701 is enabled [tool.ruff.lint.per-file-ignores] # By default, private member access is allowed in tests # See https://github.com/DiamondLightSource/python-copier-template/issues/154 # Remove this line to forbid private member access in tests -"tests/**/*" = ["SLF001", "S101"] -"src/phoebus_guibuilder/testing/**/*" = ["SLF001", "S101"] -"system_tests/**/*" = ["SLF001", "S101"] -"docs/examples/**/*" = ["SLF001", "S101"] - - -[tool.importlinter] -root_package = "phoebus_guibuilder" - -[[tool.importlinter.contracts]] -name = "All runtime modules are in layers" -type = "layers" -containers = ["phoebus_guibuilder"] -layers = ["plan_stubs", "fastcs", "epics | tango | sim", "core"] -exhaustive = true -exhaustive_ignores = ["testing", "_version", "__main__"] - -[[tool.importlinter.contracts]] -name = "Testing and sim modules are not used at runtime" -type = "forbidden" -forbidden_modules = ["phoebus_guibuilder.testing", "phoebus_guibuilder.sim"] -source_modules = [ - "phoebus_guibuilder.plan_stubs", - "phoebus_guibuilder.fast.*", - "phoebus_guibuilder.epics", - "phoebus_guibuilder.tango", -] +"tests/**/*" = ["SLF001"] diff --git a/src/phoebus_guibuilder/__init__.py b/src/phoebus_guibuilder/__init__.py index 26d23bad..a2ffbf36 100644 --- a/src/phoebus_guibuilder/__init__.py +++ b/src/phoebus_guibuilder/__init__.py @@ -1,3 +1,11 @@ +"""Top level API. + +.. data:: __version__ + :type: str + + Version number as calculated by https://github.com/pypa/setuptools_scm +""" + from ._version import __version__ __all__ = ["__version__"] diff --git a/src/phoebus_guibuilder/__main__.py b/src/phoebus_guibuilder/__main__.py index b6eb622f..66f927e3 100644 --- a/src/phoebus_guibuilder/__main__.py +++ b/src/phoebus_guibuilder/__main__.py @@ -1,16 +1,24 @@ +"""Interface for ``python -m phoebus_guibuilder``.""" + from argparse import ArgumentParser +from collections.abc import Sequence from . import __version__ __all__ = ["main"] -def main(args=None): +def main(args: Sequence[str] | None = None) -> None: + """Argument parser for the CLI.""" parser = ArgumentParser() - parser.add_argument("-v", "--version", action="version", version=__version__) - args = parser.parse_args(args) + parser.add_argument( + "-v", + "--version", + action="version", + version=__version__, + ) + parser.parse_args(args) -# test with: python -m phoebus_guibuilder if __name__ == "__main__": main() diff --git a/tests/conftest.py b/tests/conftest.py index d5cdd5f7..ebe9c10f 100644 --- a/tests/conftest.py +++ b/tests/conftest.py @@ -1,4 +1,5 @@ import os +from typing import Any import pytest @@ -7,9 +8,14 @@ if os.getenv("PYTEST_RAISE", "0") == "1": @pytest.hookimpl(tryfirst=True) - def pytest_exception_interact(call): - raise call.excinfo.value + def pytest_exception_interact(call: pytest.CallInfo[Any]): + if call.excinfo is not None: + raise call.excinfo.value + else: + raise RuntimeError( + f"{call} has no exception data, an unknown error has occurred" + ) @pytest.hookimpl(tryfirst=True) - def pytest_internalerror(excinfo): + def pytest_internalerror(excinfo: pytest.ExceptionInfo[Any]): raise excinfo.value From cb7319f7b07845514c92763a59680ab3aef07f19 Mon Sep 17 00:00:00 2001 From: Ollie Copping Date: Wed, 5 Feb 2025 15:42:26 +0000 Subject: [PATCH 4/4] More ci and devcontainer changes --- .devcontainer/devcontainer.json | 22 +- .devcontainer/post-install.sh | 5 + .vscode/settings.json | 1 + Dockerfile | 32 +- poetry.lock | 1602 +++++++++++++++++++++++++- pyproject.toml | 37 +- src/phoebus_guibuilder/guibuilder.py | 39 +- 7 files changed, 1693 insertions(+), 45 deletions(-) create mode 100644 .devcontainer/post-install.sh diff --git a/.devcontainer/devcontainer.json b/.devcontainer/devcontainer.json index 979a89ce..b8a3c126 100644 --- a/.devcontainer/devcontainer.json +++ b/.devcontainer/devcontainer.json @@ -13,7 +13,16 @@ "vscode": { // Set *default* container specific settings.json values on container create. "settings": { - "python.defaultInterpreterPath": "/venv/bin/python" + "python.defaultInterpreterPath": "/venv/bin/python", + "python.testing.unittestEnabled": false, + "python.testing.pytestEnabled": true, + "editor.formatOnSave": true, + "editor.codeActionsOnSave": { + "source.organizeImports": "explicit" + }, + "[python]": { + "editor.defaultFormatter": "charliermarsh.ruff" + } }, // Add the IDs of extensions you want installed when the container is created. "extensions": [ @@ -29,7 +38,14 @@ }, "features": { // add in eternal history and other bash features - "ghcr.io/diamondlightsource/devcontainer-features/bash-config:1.0.0": {} + "ghcr.io/diamondlightsource/devcontainer-features/bash-config:1.0.0": {}, + "ghcr.io/devcontainers/features/common-utils:2": { + "installZsh": true, + "configureZshAsDefaultShell": true, + "installOhMyZsh": true, + "installOhMyZshConfig": true, + "upgradePackages": true + } }, // Create the config folder for the bash-config feature "initializeCommand": "mkdir -p ${localEnv:HOME}/.config/bash-config", @@ -42,5 +58,5 @@ // Mount the parent as /workspaces so we can pip install peers as editable "workspaceMount": "source=${localWorkspaceFolder}/..,target=/workspaces,type=bind", // After the container is created, install the python project in editable form - "postCreateCommand": "pip install $([ -f dev-requirements.txt ] && echo '-c dev-requirements.txt') -e '.[dev]' && pre-commit install" + "postCreateCommand": "bash ./.devcontainer/post-install.sh" } diff --git a/.devcontainer/post-install.sh b/.devcontainer/post-install.sh new file mode 100644 index 00000000..a60e5468 --- /dev/null +++ b/.devcontainer/post-install.sh @@ -0,0 +1,5 @@ +pip install --upgrade pip +pip install $([ -f dev-requirements.txt ] && echo '-c dev-requirements.txt') -e '.[dev]' +pre-commit install +poetry install +poetry env use 3 diff --git a/.vscode/settings.json b/.vscode/settings.json index 101c75fa..b5845520 100644 --- a/.vscode/settings.json +++ b/.vscode/settings.json @@ -9,4 +9,5 @@ "[python]": { "editor.defaultFormatter": "charliermarsh.ruff", }, + "python.analysis.autoImportCompletions": true, } diff --git a/Dockerfile b/Dockerfile index c67b3480..95a5fb1f 100644 --- a/Dockerfile +++ b/Dockerfile @@ -8,21 +8,27 @@ RUN apt-get update && apt-get install -y --no-install-recommends \ graphviz \ && rm -rf /var/lib/apt/lists/* -# Set up a virtual environment and put it in PATH -RUN python -m venv /venv -ENV PATH=/venv/bin:$PATH +RUN pip install poetry>=2.0.0 -# The build stage installs the context into the venv -FROM developer AS build -COPY . /context -WORKDIR /context -RUN touch dev-requirements.txt && pip install -c dev-requirements.txt . +COPY . ./ +COPY src/phoebus_guibuilder ./phoebus_guibuilder +RUN touch README.md -# The runtime stage copies the built venv into a slim runtime container -FROM python:${PYTHON_VERSION}-slim AS runtime -# Add apt-get system dependecies for runtime here if needed -COPY --from=build /venv/ /venv/ -ENV PATH=/venv/bin:$PATH +# # Set up a virtual environment and put it in PATH +# RUN python -m venv /venv +# ENV PATH=/venv/bin:$PATH + +# # The build stage installs the context into the venv +# FROM developer AS build +# COPY . /context +# WORKDIR /context +# RUN touch dev-requirements.txt && pip install -c dev-requirements.txt . + +# # The runtime stage copies the built venv into a slim runtime container +# FROM python:${PYTHON_VERSION}-slim AS runtime +# # 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= ["autodoc-pydantic", "pre-commit", "pyright", "pytest", "pytest-asyncio", "pytest-cov", "pytest-faulthandler", "pytest-forked", "pytest-rerunfailures", "pytest-timeout", "ruff", "sphinx", "sphinx-autobuild", "sphinx-copybutton", "sphinx-design", "sphinxcontrib-mermaid", "tox-direct", "types-mock", "types-pyyaml"] + [metadata] -lock-version = "2.0" -python-versions = "^3.10" -content-hash = "9700add76e25f0642086b3798d14275a8b3de1768b00620a1951bf8cd42fdb72" +lock-version = "2.1" +python-versions = ">=3.12" +content-hash = "8e91bdcebd947df92f6fd0152dff571092b45a81b866645fceb6c27c9dd183bf" diff --git a/pyproject.toml b/pyproject.toml index ee7485ba..35b19c47 100644 --- a/pyproject.toml +++ b/pyproject.toml @@ -1,6 +1,4 @@ [project] -dependencies = ["python", "pyyaml"] -urls = { github = "https://github.com/DiamondLightSource/phoebus-guibuilder" } name = "phoebus-guibuilder" version = "0.1.0" description = "A package for building GUIs" @@ -9,20 +7,45 @@ classifiers = [ "License :: OSI Approved :: BSD License", "Programming Language :: Python :: 3.12", ] +urls = { GitHub = "https://github.com/DiamondLightSource/phoebus-guibuilder" } authors = [ { name = "Oliver Copping", email = "oliver.copping@diamond.ac.uk" }, { name = "Adedamola Sode", email = "adedamola.sode@diamond.ac.uk" }, ] -license = "LICENCE.file" +license = { file = "LICENSE" } readme = "README.md" requires-python = ">=3.12" +dependencies = ["pyyaml (>=6.0.2)"] +optional-dependencies = { dev = [ + "pre-commit", + "pyright", + "pytest", + "pytest-asyncio", + "pytest-cov", + "pytest-faulthandler", + "pytest-forked", + "pytest-rerunfailures", + "pytest-timeout", + "ruff", + "sphinx<7.4.0", + "sphinx-autobuild", + "autodoc-pydantic", + "sphinxcontrib-mermaid", + "sphinx-copybutton", + "sphinx-design", + "tox-direct", + "types-mock", + "types-pyyaml", +] } + [build-system] -requires = ["poetry-core>=2.0.0", "pyyaml>=6.0.2"] -build-backend = "poetry.core.masonry.api" +requires = ["poetry-core>=2.0.0", "poetry-dynamic-versioning>=1.0.0,<2.0.0"] +build-backend = "poetry_dynamic_versioning.backend" + -[tool.setuptools_scm] -version_file = "src/phoebus_guibuilder/_version.py" +# [tool.setuptools_scm] +# version_file = "src/phoebus_guibuilder/_version.py" # overwrites base version [tool.pyright] typeCheckingMode = "standard" diff --git a/src/phoebus_guibuilder/guibuilder.py b/src/phoebus_guibuilder/guibuilder.py index 75404249..4e3b12cb 100644 --- a/src/phoebus_guibuilder/guibuilder.py +++ b/src/phoebus_guibuilder/guibuilder.py @@ -1,7 +1,6 @@ import pprint import re from dataclasses import dataclass -from typing import Dict from warnings import warn import yaml @@ -26,27 +25,31 @@ def __post_init__(self): self._extract_p_and_r() def __repr__(self) -> str: - return f"Component(name={self.name}, desc={self.desc}, prefix={self.P}, suffix={self.R}, filename={self.filename})" + return f"Component(name={self.name}, desc={self.desc}, prefix={self.P}, \ + suffix={self.R}, filename={self.filename})" def _extract_p_and_r(self): pattern = re.compile( r""" - ^ # start of string - (?= # lookahead to ensure the following pattern matches - [A-Za-z0-9-]{14,16} # match 14 to 16 alphanumeric characters or hyphens - [:A-Za-z0-9]* # match zero or more colons or alphanumeric characters - [.A-Za-z0-9] # match a dot or alphanumeric character + ^ # start of string + (?= # lookahead to ensure the following pattern matches + [A-Za-z0-9-]{14,16} # match 14 to 16 alphanumeric characters or hyphens + [:A-Za-z0-9]* # match zero or more colons or alphanumeric characters + [.A-Za-z0-9] # match a dot or alphanumeric character ) - (?!.*--) # negative lookahead to ensure no double hyphens - (?!.*:\..) # negative lookahead to ensure no colon followed by a dot - ( # start of capture group 1 - (?:[A-Za-z0-9]{2,5}-){3} # match 2 to 5 alphanumeric characters followed by a hyphen, repeated 3 times - [\d]* # match zero or more digits - [^:]? # match zero or one non-colon character + (?!.*--) # negative lookahead to ensure no double hyphens + (?!.*:\..) # negative lookahead to ensure no colon followed by a dot + ( # start of capture group 1 + (?:[A-Za-z0-9]{2,5}-){3} # match 2 to 5 alphanumeric characters followed + # by a hyphen, repeated 3 times + [\d]* # match zero or more digits + [^:]? # match zero or one non-colon character ) - (?::([a-zA-Z0-9:]*))? # match zero or one colon followed by zero or more alphanumeric characters or colons (capture group 2) - (?:\.([a-zA-Z0-9]+))? # match zero or one dot followed by one or more alphanumeric characters (capture group 3) - $ # end of string + (?::([a-zA-Z0-9:]*))? # match zero or one colon followed by zero or more + # alphanumeric characters or colons (capture group 2) + (?:\.([a-zA-Z0-9]+))? # match zero or one dot followed by one or more + # alphanumeric characters (capture group 3) + $ # end of string """, re.VERBOSE, ) @@ -58,13 +61,13 @@ def _extract_p_and_r(self): # TODO: Is this needed? self.attribute: str | None = match.group(3) else: - warn(f"No valid PV prefix found for {self.name}.") + warn(f"No valid PV prefix found for {self.name}.", stacklevel=1) exit() components: list[Component] = [] -with open("create_gui.yaml", "r") as f: +with open("create_gui.yaml") as f: conf = yaml.safe_load(f) bl: dict[str, str] = conf["beamline"]