Make sure that the TMPDIR is used as STORAGE if it is set

Author: Caspar van Leeuwen

bot/build.sh

@@ -90,15 +90,23 @@ if [[ ! -z ${SINGULARITY_CACHEDIR} ]]; then
     export SINGULARITY_CACHEDIR
 fi
 
-echo -n "setting \$STORAGE by replacing any var in '${LOCAL_TMP}' -> "
-# replace any env variable in ${LOCAL_TMP} with its
-#   current value (e.g., a value that is local to the job)
-STORAGE=$(envsubst <<< ${LOCAL_TMP})
-echo "'${STORAGE}'"
+if [[ -z "${TMPDIR}" ]]; then
+    echo -n "setting \$STORAGE by replacing any var in '${LOCAL_TMP}' -> "
+    # replace any env variable in ${LOCAL_TMP} with its
+    #   current value (e.g., a value that is local to the job)
+    STORAGE=$(envsubst <<< ${LOCAL_TMP})
+else
+    STORAGE=${TMPDIR}
+fi
+echo "bot/build.sh: STORAGE='${STORAGE}'"
 
 # make sure ${STORAGE} exists
 mkdir -p ${STORAGE}
 
+# Make sure ${STORAGE} gets bind-mounted
+# This will make sure that any subsequent jobs that create dirs or files under STORAGE have access to it in the container
+export SINGULARITY_BIND="${SINGULARITY_BIND},${STORAGE}"
+
 # make sure the base tmp storage is unique
 JOB_STORAGE=$(mktemp --directory --tmpdir=${STORAGE} bot_job_tmp_XXX)
 echo "bot/build.sh: created unique base tmp storage directory at ${JOB_STORAGE}"
@@ -287,6 +295,9 @@ else
     TARBALL_STEP_ARGS+=("--resume" "${REMOVAL_TMPDIR}")
 fi
 
+# Make sure we define storage, so that the TMPDIR is set to this in eessi_container.sh
+TARBALL_STEP_ARGS+=("--storage" "${STORAGE}")
+
 timestamp=$(date +%s)
 # to set EESSI_VERSION we need to source init/eessi_defaults now
 source $software_layer_dir/init/eessi_defaults