From a34e8f813e63cf64bf88a272a085a5e9832a41dc Mon Sep 17 00:00:00 2001 From: Garrett Stevens Date: Tue, 29 Apr 2025 16:56:23 -0600 Subject: [PATCH] Use older builds of blat and faToTwoBit in Docker --- Dockerfile | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/Dockerfile b/Dockerfile index 2049ef82b..d7f89f474 100644 --- a/Dockerfile +++ b/Dockerfile @@ -31,9 +31,9 @@ curl -sL https://deb.nodesource.com/setup_12.x | bash - apt-get -qq update --fix-missing apt-get --no-install-recommends -y install nodejs -curl -s "http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/blat/blat" -o /usr/local/bin/blat +curl -s "https://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64.v385/blat/blat" -o /usr/local/bin/blat chmod +x /usr/local/bin/blat -curl -s "http://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64/faToTwoBit" -o /usr/local/bin/faToTwoBit +curl -s "https://hgdownload.soe.ucsc.edu/admin/exe/linux.x86_64.v385/faToTwoBit" -o /usr/local/bin/faToTwoBit chmod +x /usr/local/bin/faToTwoBit wget --quiet https://github.com/galaxy-genome-annotation/chado-schema-builder/releases/download/1.31-jenkins26/chado-1.31.sql.gz -O /chado.sql.gz gunzip /chado.sql.gz