How to estimate the gene flow betweem sister species using gIMble?

[kuangzhuoran]

Hello, thank you very much for developing this tool.

I saw that the authors used gIMble to estimate gene flow across genome-wide windows in the paper “Chromosome Fissions and Fusions Act as Barriers to Gene Flow between Brenthis Fritillary Butterflies.”

However, I didn’t find information related to gene flow analysis on the GitHub page. Should I expect gene flow estimates to be included in the output files after sequentially running parse, blocks, ......, gridsearch, and simulate?

[GertjanBisschop]

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