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Hi
I am using primerTree to run in silico PCR for degenerated primers, however, when I run search_primer_pair() the BLASTing starts but it stops without finishing the process and it gives the following error:
Error in do.ply(i) : task 1 failed - "incorrect number of dimensions"
Do you know how can I avoid it?
The session information:
R version 3.6.3 (2020-02-29)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Debian GNU/Linux 9 (stretch)
attached base packages:
[1] parallel stats graphics grDevices utils datasets methods base
other attached packages:
[1] forcats_0.4.0 stringr_1.4.0 purrr_0.3.3 readr_1.3.1
[5] tidyr_1.0.0 tibble_2.1.3 tidyverse_1.2.1 dplyr_0.8.3
[9] TmCalculator_1.0.0 ape_5.3 plyr_1.8.4 reshape2_1.4.3
[13] ggplot2_3.2.1 primerTree_1.0.5 gridExtra_2.3 directlabels_2018.05.22
[17] doMC_1.3.6 iterators_1.0.12 foreach_1.4.7
loaded via a namespace (and not attached):
[1] tidyselect_0.2.5 haven_2.2.0 lattice_0.20-38 colorspace_1.4-1 generics_0.0.2 vctrs_0.2.0 XML_3.98-1.19
[8] rlang_0.4.1 pillar_1.4.2 glue_1.3.1 withr_2.1.2 modelr_0.1.5 readxl_1.3.1 lifecycle_0.1.0
[15] munsell_0.5.0 gtable_0.3.0 cellranger_1.1.0 rvest_0.3.5 codetools_0.2-16 broom_0.5.2 Rcpp_1.0.3
[22] scales_1.0.0 backports_1.1.5 jsonlite_1.6 hms_0.5.2 stringi_1.4.3 grid_3.6.3 cli_1.1.0
[29] quadprog_1.5-7 tools_3.6.3 magrittr_1.5 lazyeval_0.2.2 crayon_1.3.4 pkgconfig_2.0.3 zeallot_0.1.0
[36] xml2_1.2.0 lubridate_1.7.4 assertthat_0.2.1 httr_1.4.1 rstudioapi_0.10 R6_2.4.1 nlme_3.1-137
[43] compiler_3.6.3
Thanks in advanced!
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