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If I want to detect somatic SVs with matched tumor and normal data by subtracting SVs present in both normal and tumour, should i use --tumor with the tumor data and not with the normal data? Or should I use it on both?
If I want to detect somatic SVs with matched tumor and normal data by subtracting SVs present in both normal and tumour, should i use
--tumorwith the tumor data and not with the normal data? Or should I use it on both?