enomic error, working test files #2
Description
issue 1:
R/Classes.R has the following line with the following typo:
| 223 | genomicFeature <- as(genomicFeature, "data.frame") |
|---|---|
| 224 | if (zero.based) { |
| 225 | enomicFeature$start <- genomicFeature$start - 1 |
| issue 2: | |
| Can you provide a working example of a small dataset that I can run start to finish (files I can run rather than R objects, so I can format my data just like yours)? I'm having a very difficult time getting this to run. | |
| the countReads method has a very difficult time running, particularly with the countReads method in Windows: | |
| tca.count.reads<-TCseq::countReads(tca,dir=paste0(groupdir,"dalgleishjl/bwaBam/")) | |
| Error during wrapup: BiocParallel errors | |
| element index: 1, 2, 3, 4, 5, 6, ... |