diff --git a/links_and_mods.cif b/links_and_mods.cif index acc70d6b6..ea3e1a7f2 100644 --- a/links_and_mods.cif +++ b/links_and_mods.cif @@ -11,7 +11,6 @@ _chem_link.name DG9-SER DG9 DG9m1 NON-POLYMER SER SERm1 peptide DG9-SER DNA-SER . DEL_OP3 DNA/RNA SER SERm1 peptide DNA-SER DNA-TYR . DEL_OP3 DNA/RNA TYR TYRmod5 peptide DNA-TYR -SS . CYS-SS peptide . CYS-SS peptide SS-bridge disulf CYS CYS-SS peptide CYS CYS-SS peptide SS-bridge CYS-MPR CYS CYS-SS peptide MPR MPRm1 NON-POLYMER SS-bridge TRANS . DEL-OXT peptide . DEL-HN1 peptide TRANS @@ -427,47 +426,6 @@ _chem_link_chir.atom_id_3 _chem_link_chir.volume_sign DNA-TYR 1 P 1 "O5'" 2 OH 1 OP2 both -data_link_SS -loop_ -_chem_link_bond.link_id -_chem_link_bond.atom_1_comp_id -_chem_link_bond.atom_id_1 -_chem_link_bond.atom_2_comp_id -_chem_link_bond.atom_id_2 -_chem_link_bond.type -_chem_link_bond.value_dist -_chem_link_bond.value_dist_esd -SS 1 SG 2 SG single 2.031 .020 - -loop_ -_chem_link_angle.link_id -_chem_link_angle.atom_1_comp_id -_chem_link_angle.atom_id_1 -_chem_link_angle.atom_2_comp_id -_chem_link_angle.atom_id_2 -_chem_link_angle.atom_3_comp_id -_chem_link_angle.atom_id_3 -_chem_link_angle.value_angle -_chem_link_angle.value_angle_esd -SS 1 CB 1 SG 2 SG 103.800 1.800 -SS 1 SG 2 SG 2 CB 103.800 1.800 - -loop_ -_chem_link_tor.link_id -_chem_link_tor.id -_chem_link_tor.atom_1_comp_id -_chem_link_tor.atom_id_1 -_chem_link_tor.atom_2_comp_id -_chem_link_tor.atom_id_2 -_chem_link_tor.atom_3_comp_id -_chem_link_tor.atom_id_3 -_chem_link_tor.atom_4_comp_id -_chem_link_tor.atom_id_4 -_chem_link_tor.value_angle -_chem_link_tor.value_angle_esd -_chem_link_tor.period -SS ss 1 CB 1 SG 2 SG 2 CB 90.00 10.0 2 - data_link_disulf loop_ _chem_link_bond.link_id diff --git a/list/mon_lib_list.cif b/list/mon_lib_list.cif index f61a649fc..a27510022 100644 --- a/list/mon_lib_list.cif +++ b/list/mon_lib_list.cif @@ -36352,7 +36352,6 @@ _chem_link.name DG9-SER DG9 DG9m1 NON-POLYMER SER SERm1 peptide DG9-SER DNA-SER . DEL_OP3 DNA/RNA SER SERm1 peptide DNA-SER DNA-TYR . DEL_OP3 DNA/RNA TYR TYRmod5 peptide DNA-TYR -SS . CYS-SS peptide . CYS-SS peptide SS-bridge disulf CYS CYS-SS peptide CYS CYS-SS peptide SS-bridge CYS-MPR CYS CYS-SS peptide MPR MPRm1 NON-POLYMER SS-bridge TRANS . DEL-OXT peptide . DEL-HN1 peptide TRANS @@ -36768,47 +36767,6 @@ _chem_link_chir.atom_id_3 _chem_link_chir.volume_sign DNA-TYR 1 P 1 "O5'" 2 OH 1 OP2 both -data_link_SS -loop_ -_chem_link_bond.link_id -_chem_link_bond.atom_1_comp_id -_chem_link_bond.atom_id_1 -_chem_link_bond.atom_2_comp_id -_chem_link_bond.atom_id_2 -_chem_link_bond.type -_chem_link_bond.value_dist -_chem_link_bond.value_dist_esd -SS 1 SG 2 SG single 2.031 .020 - -loop_ -_chem_link_angle.link_id -_chem_link_angle.atom_1_comp_id -_chem_link_angle.atom_id_1 -_chem_link_angle.atom_2_comp_id -_chem_link_angle.atom_id_2 -_chem_link_angle.atom_3_comp_id -_chem_link_angle.atom_id_3 -_chem_link_angle.value_angle -_chem_link_angle.value_angle_esd -SS 1 CB 1 SG 2 SG 103.800 1.800 -SS 1 SG 2 SG 2 CB 103.800 1.800 - -loop_ -_chem_link_tor.link_id -_chem_link_tor.id -_chem_link_tor.atom_1_comp_id -_chem_link_tor.atom_id_1 -_chem_link_tor.atom_2_comp_id -_chem_link_tor.atom_id_2 -_chem_link_tor.atom_3_comp_id -_chem_link_tor.atom_id_3 -_chem_link_tor.atom_4_comp_id -_chem_link_tor.atom_id_4 -_chem_link_tor.value_angle -_chem_link_tor.value_angle_esd -_chem_link_tor.period -SS ss 1 CB 1 SG 2 SG 2 CB 90.00 10.0 2 - data_link_disulf loop_ _chem_link_bond.link_id