Installation instructions for the environment needed to run DeepCis should be added to the repo.
These include an exported (conda) environment and instructions on how to install said environment for users unfamiliar with conda.
in particular, the installation of the shap package from a forked repo should be explained or directly included in the environment file, as it is necessary to run the motif extraction:
pip install git+https://github.com/AvantiShri/shap.git
Installation instructions for the environment needed to run DeepCis should be added to the repo.
These include an exported (conda) environment and instructions on how to install said environment for users unfamiliar with conda.
in particular, the installation of the shap package from a forked repo should be explained or directly included in the environment file, as it is necessary to run the motif extraction:
pip install git+https://github.com/AvantiShri/shap.git