python-examples

EVSRESTAPI client SDK: Python Tutorial

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This tutorial shows how to use a locally installed version of Python to interact with the EVSREST API. Shown here are examples that demonstrate the range of functionality that the EVSREST API has. Many of these API calls can take in different parameters than the ones shown.

Prerequisites

• Python 3.5 or higher must be installed. The latest version can be found here.

• All libraries in 'requirements.txt' must be installed.

  • Run the command 'pip install -r requirements.txt' in a console window to check these libraries and install any that are not already installed.
  • If pip itself is not installed, run the command 'curl https://bootstrap.pypa.io/get-pip.py -o get-pip.py; python get-pip.py' to install it.

The various scripts make use of the config.ini file to load necessary information that is uniform across all tests.

Sample Python Calls

The following examples are exhibited by various unit tests defined in the code in python-examples. All commands to run these tests should be run from that directory.

• Get terminologies
• Get concept by code (minimal information)
• Get concepts by list (minimal information)
• Get concept by code (summary information)
• Get concept by code (full information)
• Get concept by code (custom include)
• Get concept part
• Get concept descendants
• Get all properties
• Get property by code (or label)
• Get all qualifiers
• Get qualifier by code (or label)
• Get qualifier values by code (or label)
• Get all roles
• Get role by code (or label)
• Get all associations
• Get association by code (or label)
• Get all term types
• Get all synonym sources
• Get all definition types
• Get definition type by code
• Get all synonym types
• Get synonym type by code
• Find root concepts
• Get paths to/from root from a code
• Get paths to an ancestor code from a code
• Get subtree for code
• Find concepts by search term (use paging to get only first 5 results)
• Find concepts by search term (restrict by concept status)
• Find concepts by search term (restrict by definition source)
• Find concepts by search term (restrict by definition type)
• Find concepts by search term (restrict by synonym source and termgroup)
• Find concepts by search term (restrict by synonym type)
• Find concepts by search term (where search term is a code)
• Find concepts by search term (using type=match)
• Find concepts by search term (using type=startsWith)
• Find concepts by search term (using type=phrase)
• Find concepts by search term (using type=fuzzy)
• Find concepts by search term (using type=AND)
• Find concepts by search term (using type=OR)
• Find concepts by search term (with highlights)
• Find concepts by property
• Find concepts by subset
• Find concepts by SPARQL code
• Get all subsets
• Get subset by code
• Get subset members by subset code
• Get all mapsets
• Get mapset by code
• Get maps by mapset code
• Get replacement concepts for an inactive concept code
• Get replacement concepts for a list of inactive concept codes
• Get SPARQL bindings from query

Get terminologies

Return all loaded terminologies currently hosted by the API.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_terminologies

2024-07-03T16:31:33.756 INFO : Get all terminologies for ncit
2024-07-03T16:31:33.756 INFO :     terminologies - [Terminology(uri=None, ct=None, terminology='ncit', version='21.06e', var_date='June 28, 2021', name='NCI Thesaurus 21.06e', description='NCI Thesaurus, a controlled vocabulary in support of NCI administrative and scientific activities. Produced by the Enterprise Vocabulary System (EVS), a project by the NCI Center for Biomedical Informatics and Information Technology. National Cancer Institute, National Institutes of Health, Bethesda, MD 20892, U.S.A.', graph='http://NCI_T_monthly', terminology_version='ncit_21.06e', latest=True, tags={'monthly': 'true'}, index_name='concept_ncit_2106e', object_index_name='evs_object_ncit_2106e', metadata=TerminologyMetadata(uri=None, ct=None, ui_label='NCI Thesaurus', max_versions=3, loader='rdf', concept_statuses=['Obsolete_Concept', 'Header_Concept', 'Retired_Concept', 'Provisional_Concept', 'http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C63923'], retired_status_value='Retired_Concept', details_columns={'synonyms-termType': True, 'synonyms-code': True, 'synonyms-subSource': True, 'synonyms-source': True, 'definitions-attribution': True, 'definitions-source': True}, hierarchy=True, history=False, source_ct=74, subset_link='P374', license_text=None, meta_concept_field=None, code_label='NCI Thesaurus Code', welcome_text=None, synonym_term_group=None, term_groups=None, preferred_term_groups=None), sparql_flag=None)]

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Get concept by code (minimal information)

Return concept object with minimal information for a specified code.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_concept

2024-07-02T13:56:44.056 INFO : Get a single concept for code - C3224
2024-07-02T13:56:44.056 INFO :    concept = uri=None ct=None code='C3224' name='Melanoma' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status='DEFAULT' source=None leaf=False active=True synonyms=None definitions=None history=None properties=None children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Get concepts by list (minimal information)

Return concept objects with minimal information for a specified list of codes.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_concepts

2024-07-02T13:56:44.112 INFO : Get list of concepts for codes - C3910 & C3224
2024-07-02T13:56:44.112 INFO :    concepts = [Concept(uri=None, ct=None, code='C3910', name='Molecular Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get concept by code (summary information)

Return concept object with summary information for a specified code.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_concept_summary

2024-07-02T13:56:44.095 INFO : Get a summary concept for code - C3224
2024-07-02T13:56:44.095 INFO :    concept = uri=None ct=None code='C3224' name='Melanoma' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status='DEFAULT' source=None leaf=False active=True synonyms=[Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='caDSR', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='CDISC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='MELANOMA, MALIGNANT', highlight=None, term_type='PT', type='FULL_SYN', source='CDISC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='Cellosaurus', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CPTAC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CTEP', code='10053571', sub_source='SDC', qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='DN', type='FULL_SYN', source='CTRP', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CTRP', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='GDC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma, NOS', highlight=None, term_type='SY', type='FULL_SYN', source='GDC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NCI-GLOSS', code='CDR0000045135', sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NICHD', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)] definitions=[Definition(uri=None, ct=None, definition='A form of cancer that begins in melanocytes (cells that make the pigment melanin). It may begin in a mole (skin melanoma), but can also begin in other pigmented tissues, such as in the eye or in the intestines.', highlight=None, type='ALT_DEFINITION', source='NCI-GLOSS', qualifiers=None), Definition(uri=None, ct=None, definition='A malignant neoplasm composed of melanocytes.', highlight=None, type='ALT_DEFINITION', source='CDISC', qualifiers=None), Definition(uri=None, ct=None, definition='A malignant neoplasm comprised of melanocytes typically arising in the skin.', highlight=None, type='ALT_DEFINITION', source='NICHD', qualifiers=None), Definition(uri=None, ct=None, definition='A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.', highlight=None, type='DEFINITION', source='NCI', qualifiers=None)] history=None properties=[ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CDISC', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='Cellosaurus', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CPTAC', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CTEP', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CTRP', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='GDC', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='MedDRA', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='NICHD', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='ICD-O-3_Code', value='8720/3', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Legacy Concept Name', value='Melanoma', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='8720/3', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='Malignant melanoma, NOS', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='Melanoma', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='Melanoma, NOS', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Neoplastic_Status', value='Malignant', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Neoplastic Process', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='UMLS_CUI', value='C0025202', highlight=None, qualifiers=None, source=None)] children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Get concept by code (full information)

Return concept object with full information for a specified code.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_concept_full

2024-07-02T13:56:44.073 INFO : Get a full concept for code - C3224
2024-07-02T13:56:44.075 INFO :    concept = uri=None ct=None code='C3224' name='Melanoma' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status='DEFAULT' source=None leaf=False active=True synonyms=[Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='caDSR', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='CDISC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='MELANOMA, MALIGNANT', highlight=None, term_type='PT', type='FULL_SYN', source='CDISC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='Cellosaurus', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CPTAC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CTEP', code='10053571', sub_source='SDC', qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='DN', type='FULL_SYN', source='CTRP', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CTRP', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='GDC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma, NOS', highlight=None, term_type='SY', type='FULL_SYN', source='GDC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NCI-GLOSS', code='CDR0000045135', sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NICHD', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)] definitions=[Definition(uri=None, ct=None, definition='A form of cancer that begins in melanocytes (cells that make the pigment melanin). It may begin in a mole (skin melanoma), but can also begin in other pigmented tissues, such as in the eye or in the intestines.', highlight=None, type='ALT_DEFINITION', source='NCI-GLOSS', qualifiers=None), Definition(uri=None, ct=None, definition='A malignant neoplasm composed of melanocytes.', highlight=None, type='ALT_DEFINITION', source='CDISC', qualifiers=None), Definition(uri=None, ct=None, definition='A malignant neoplasm comprised of melanocytes typically arising in the skin.', highlight=None, type='ALT_DEFINITION', source='NICHD', qualifiers=None), Definition(uri=None, ct=None, definition='A malignant, usually aggressive tumor composed of atypical, neoplastic melanocytes. Most often, melanomas arise in the skin (cutaneous melanomas) and include the following histologic subtypes: superficial spreading melanoma, nodular melanoma, acral lentiginous melanoma, and lentigo maligna melanoma. Cutaneous melanomas may arise from acquired or congenital melanocytic or dysplastic nevi. Melanomas may also arise in other anatomic sites including the gastrointestinal system, eye, urinary tract, and reproductive system. Melanomas frequently metastasize to lymph nodes, liver, lungs, and brain.', highlight=None, type='DEFINITION', source='NCI', qualifiers=None)] history=[History(uri=None, ct=None, code='C3224', name=None, action='create', var_date='2003-08-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2003-09-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2003-10-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2003-12-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2004-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2004-09-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2005-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2006-01-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2006-01-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2006-09-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2007-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2007-04-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2009-10-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2009-11-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2010-06-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2010-06-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-02-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-04-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-11-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-11-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-11-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2011-12-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-01-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-02-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-03-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-04-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-05-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-06-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-07-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-08-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-09-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-10-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-11-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2012-12-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-01-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-01-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-01-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-02-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-03-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-04-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-05-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-06-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-07-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2013-07-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-02-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-03-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-08-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-09-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-10-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-10', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-11-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2014-12-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-01-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-02-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-04-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-05-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-06-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-07-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-07-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-08-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-08-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-08-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-09-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-10-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-02', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-11-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2015-12-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-04', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-01-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-04-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-04-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-16', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-05-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-13', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-06-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-18', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-07-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-01', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-08', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-15', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-08-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-06', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-20', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-09-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-11', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-10-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-07', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-14', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-21', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-11-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-05', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-12', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-19', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2016-12-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-03', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-09', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-17', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-01-23', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-07-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-09-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2017-12-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-02-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-07-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-10-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-10-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-11-26', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2018-12-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-03-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-04-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-05-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-06-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-07-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-09-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-10-28', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2019-11-25', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-02-24', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-03-30', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-04-27', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-08-31', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2020-09-29', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2021-02-22', replacement_code=None, replacement_name=None), History(uri=None, ct=None, code='C3224', name=None, action='modify', var_date='2021-03-29', replacement_code=None, replacement_name=None)] properties=[ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CDISC', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='Cellosaurus', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CPTAC', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CTEP', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CTRP', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='GDC', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='MedDRA', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Contributing_Source', value='NICHD', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='ICD-O-3_Code', value='8720/3', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Legacy Concept Name', value='Melanoma', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='8720/3', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='Malignant melanoma, NOS', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='Melanoma', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Maps_To', value='Melanoma, NOS', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Neoplastic_Status', value='Malignant', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Neoplastic Process', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='UMLS_CUI', value='C0025202', highlight=None, qualifiers=None, source=None)] children=[Concept(uri=None, ct=None, code='C3802', name='Amelanotic Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8410', name='Breast Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C131506', name='Childhood Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3510', name='Cutaneous Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4236', name='Epithelioid Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9499', name='Melanomatosis', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8925', name='Metastatic Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C66756', name='Mixed Epithelioid and Spindle Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8711', name='Non-Cutaneous Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8562', name='Ocular Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C118828', name='Orbital Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C162547', name='Penile Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7087', name='Recurrent Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C147983', name='Refractory Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4228', name='Regressing Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4237', name='Spindle Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C148517', name='Unresectable Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)] parents=[Concept(uri=None, ct=None, code='C9305', name='Malignant Neoplasm', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7058', name='Melanocytic Neoplasm', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)] descendants=None associations=[Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C77526', related_name='CDISC SEND Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C88025', related_name='CDISC SEND Tumor Findings Results Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C165258', related_name='Cellosaurus Disease Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C61410', related_name='Clinical Data Interchange Standards Consortium Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C138188', related_name='Clinical Trials Search-Application Programming Interface Disease Category Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C156953', related_name='CPTAC Baseline Medical Forms Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C158520', related_name='CPTAC Codelists Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C159415', related_name='CPTAC Melanoma Baseline Form', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C156966', related_name='CPTAC Neoplasms Codelist', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C156952', related_name='CPTAC Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C157534', related_name='CPTAC Uveal Melanoma Baseline Form', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C118168', related_name='CTRP Disease Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C116977', related_name='CTRP Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C138190', related_name='CTS-API Disease Main Type Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Is_Value_For_GDC_Property', related_code='C178243', related_name='Family Cancer History Relative Primary Diagnosis Question', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C159102', related_name='GDC Relationship Primary Diagnosis Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C157711', related_name='GDC Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C177537', related_name='GDC Value Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Is_Value_For_GDC_Property', related_code='C176985', related_name='Histology ICD-O Morphology Code', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Is_Value_For_GDC_Property', related_code='C177621', related_name='ICD-O-3 Morphology Term Diagnosis Question', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168658', related_name='Mapped ICDO3.1 Morphology PT Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168657', related_name='Mapped ICDO3.1 Morphology Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168655', related_name='Mapped ICDO3.1 Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168662', related_name='Mapped ICDO3.2 Morphology PT Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168661', related_name='Mapped ICDO3.2 Morphology Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C168656', related_name='Mapped ICDO3.2 Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C103113', related_name='NCI CTEP SDC Melanoma Sub-Category Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C102905', related_name='NCI CTEP Simplified Disease Classification Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C126659', related_name='NCIt Neoplasm Core Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C90259', related_name='NICHD Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Concept_In_Subset', related_code='C118464', related_name='Pediatric Adverse Events Terminology', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Neoplasm_Has_Special_Category', related_code='C9292', related_name='Solid Neoplasm', source=None, highlight=None, qualifiers=None)] inverse_associations=[Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C178243', related_name='Family Cancer History Relative Primary Diagnosis Question', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C176985', related_name='Histology ICD-O Morphology Code', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C177621', related_name='ICD-O-3 Morphology Term Diagnosis Question', source=None, highlight=None, qualifiers=None)] roles=[Role(uri=None, ct=None, type='Disease_Excludes_Finding', related_code='C36122', related_name='Benign Cellular Infiltrate', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Finding', related_code='C43268', related_name='HMB-45-Positive Neoplastic Cells Present', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C12917', related_name='Malignant Cell', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Finding', related_code='C36115', related_name='Malignant Cellular Infiltrate', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Normal_Cell_Origin', related_code='C12591', related_name='Melanocyte', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C36873', related_name='Melanoma Cell', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C12922', related_name='Neoplastic Cell', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Abnormal_Cell', related_code='C36862', related_name='Neoplastic Melanocyte', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Finding', related_code='C40993', related_name='S-100-Positive Neoplastic Cells Present', source=None, highlight=None, qualifiers=None)] disjoint_with=None inverse_roles=[Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C21390', related_name='Beta/Gamma Crystallin Domain-Containing Protein 1', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C36101', related_name='BRCA2-Associated Hereditary Breast and Ovarian Cancer Syndrome', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C10303', related_name='CDB Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C26083', related_name='Chondroitin Sulfate Proteoglycan 4', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C21389', related_name='CRYBG1 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54321', related_name='CRYBG1 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C21470', related_name='CSAG2 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54542', related_name='CSAG2 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81903', related_name='CSAG3 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81904', related_name='CSAG3 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C24316', related_name='CSPG4 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C52436', related_name='CSPG4 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63525', related_name='CVD Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63785', related_name='CVD-Aldesleukin-Interferon Alfa-2b Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C17680', related_name='Cyclin-Dependent Kinase 4', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C17786', related_name='Cyclin-Dependent Kinase Inhibitor 2A', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63782', related_name='Dacarbazine/Interferon Alfa Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Regimen_Has_Accepted_Use_For_Disease', related_code='C63781', related_name='Dartmouth Regimen', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C82885', related_name='DCT Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C82886', related_name='DCT wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C21569', related_name='DNA Repair Protein XRCC3', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C27264', related_name='Familial Atypical Mole Melanoma Syndrome', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C8495', related_name='Hereditary Retinoblastoma', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C20765', related_name='KISS1 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54288', related_name='KISS1 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C2646', related_name='L-Dopachrome Tautomerase', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C26331', related_name='Latent-Transforming Growth Factor Beta-Binding Protein 2', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C24561', related_name='LTBP2 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C51270', related_name='LTBP2 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C21261', related_name='MCAM Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54308', related_name='MCAM wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Is_Biomarker_Of', related_code='C17513', related_name='Melanoma-Associated Antigen 3', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C21141', related_name='Metastasis-Suppressor KiSS-1', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81756', related_name='MIR221 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C82171', related_name='MIR221 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C80700', related_name='MIRLET7A1 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81825', related_name='MIRLET7A1 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C80701', related_name='MIRLET7A3 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81826', related_name='MIRLET7A3 wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C80702', related_name='MIRLET7B Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C81853', related_name='MIRLET7B wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C28629', related_name='MLANA Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C54313', related_name='MLANA wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_Has_Associated_Disease', related_code='C40001', related_name='Ovarian Dermoid Cyst with Melanoma', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C18336', related_name='RAB8A Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C52547', related_name='RAB8A wt Allele', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Product_Malfunction_Associated_With_Disease', related_code='C84349', related_name='Tumor Suppressor ARF', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Disease_May_Have_Associated_Disease', related_code='C3447', related_name='Werner Syndrome', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C20335', related_name='XRCC3 Gene', source=None, highlight=None, qualifiers=None), Role(uri=None, ct=None, type='Gene_Associated_With_Disease', related_code='C51014', related_name='XRCC3 wt Allele', source=None, highlight=None, qualifiers=None)] maps=[ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='8720/3', target_term_type='PT', target_code='morphology', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='8720/3', target_terminology='ICDO3', target_terminology_version='3.1', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='8720/3', target_terminology='ICDO3', target_terminology_version='3.2', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma, NOS', target_term_type='PT', target_code='primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma', target_term_type='LLT', target_code='10053571', target_terminology='MedDRA', target_terminology_version='18.1', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma', target_term_type='PT', target_code='relationship_primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None)] paths=None

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Get concept by code (custom include)

Return custom concept information for a given terminology and code. To show a range of options, in this case, the request asks for synonyms, children, maps, and inverse associations.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_concept_custom_include

2024-07-02T13:56:43.947 INFO : Get a custom include concept for code - C3224
2024-07-02T13:56:43.948 INFO :    concept = uri=None ct=None code='C3224' name='Melanoma' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status='DEFAULT' source=None leaf=False active=True synonyms=[Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='caDSR', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='CDISC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='MELANOMA, MALIGNANT', highlight=None, term_type='PT', type='FULL_SYN', source='CDISC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='Cellosaurus', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CPTAC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CTEP', code='10053571', sub_source='SDC', qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='DN', type='FULL_SYN', source='CTRP', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='CTRP', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='GDC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma, NOS', highlight=None, term_type='SY', type='FULL_SYN', source='GDC', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NCI-GLOSS', code='CDR0000045135', sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Malignant Melanoma', highlight=None, term_type='SY', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type='PT', type='FULL_SYN', source='NICHD', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Melanoma', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)] definitions=None history=None properties=None children=[Concept(uri=None, ct=None, code='C3802', name='Amelanotic Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8410', name='Breast Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C131506', name='Childhood Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3510', name='Cutaneous Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4236', name='Epithelioid Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9499', name='Melanomatosis', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8925', name='Metastatic Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C66756', name='Mixed Epithelioid and Spindle Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8711', name='Non-Cutaneous Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8562', name='Ocular Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C118828', name='Orbital Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C162547', name='Penile Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7087', name='Recurrent Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C147983', name='Refractory Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4228', name='Regressing Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4237', name='Spindle Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C148517', name='Unresectable Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)] parents=None descendants=None associations=None inverse_associations=[Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C178243', related_name='Family Cancer History Relative Primary Diagnosis Question', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C176985', related_name='Histology ICD-O Morphology Code', source=None, highlight=None, qualifiers=None), Association(uri=None, ct=None, type='Has_GDC_Value', related_code='C177621', related_name='ICD-O-3 Morphology Term Diagnosis Question', source=None, highlight=None, qualifiers=None)] roles=None disjoint_with=None inverse_roles=None maps=[ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='8720/3', target_term_type='PT', target_code='morphology', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='8720/3', target_terminology='ICDO3', target_terminology_version='3.1', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='8720/3', target_terminology='ICDO3', target_terminology_version='3.2', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Related To', rank=None, group=None, rule=None, target_name='Malignant melanoma, NOS', target_term_type='PT', target_code='primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma, NOS', target_term_type='PT', target_code='primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma', target_term_type='LLT', target_code='10053571', target_terminology='MedDRA', target_terminology_version='18.1', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source=None, source_name=None, source_term_type=None, source_code=None, source_terminology=None, source_terminology_version=None, source_loaded=None, type='Has Synonym', rank=None, group=None, rule=None, target_name='Melanoma', target_term_type='PT', target_code='relationship_primary_diagnosis', target_terminology='GDC', target_terminology_version=None, target_loaded=None, target_term_group=None)] paths=None

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Get concept part

Returns sub-part of the concept for a given terminology and code. NOTE: in the call below, you can replace "children" in the URL with any of the following and retrieve the corresponding underlying info: children, parents, roles, associations, inverseRoles, inverseAssociations, maps.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_children

2024-07-02T13:56:44.042 INFO : Get children for code - C3224
2024-07-02T13:56:44.042 INFO :    children = [Concept(uri=None, ct=None, code='C3802', name='Amelanotic Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8410', name='Breast Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C131506', name='Childhood Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3510', name='Cutaneous Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4236', name='Epithelioid Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9499', name='Melanomatosis', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8925', name='Metastatic Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C66756', name='Mixed Epithelioid and Spindle Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8711', name='Non-Cutaneous Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8562', name='Ocular Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C118828', name='Orbital Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C162547', name='Penile Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7087', name='Recurrent Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C147983', name='Refractory Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4228', name='Regressing Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4237', name='Spindle Cell Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C148517', name='Unresectable Melanoma', terminology=None, version=None, level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get concept descendants

Return concept descendants information for a given terminology and code. The call client can be constrained by a maxLevel to prevent going deeper than a certain amount. Level 0 entries in the result are the direct children. The test sets the max level to 2.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_descendants

2024-07-02T13:56:44.134 INFO : Get list of descendants for code - C3224
2024-07-02T13:56:44.135 INFO :    descendants = [Concept(uri=None, ct=None, code='C4022', name='Acral Lentiginous Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C5319', name='Adult Meningeal Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C155311', name='Advanced Cutaneous Melanoma of the Extremity', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C171572', name='Advanced Cutaneous Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C153169', name='Advanced Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C148515', name='Advanced Uveal Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4633', name='Amelanotic Cutaneous Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3802', name='Amelanotic Melanoma', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4639', name='Anal Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4227', name='Balloon Cell Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8410', name='Breast Melanoma', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C5505', name='Central Nervous System Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C131506', name='Childhood Melanoma', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C5318', name='Childhood Meningeal Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6102', name='Choroid Epithelioid Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4561', name='Choroid Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C35782', name='Choroid Mixed Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6865', name='Choroid Necrotic Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6099', name='Choroid Spindle Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C140659', name='Choroidal and Ciliary Body Melanoma by AJCC v8 Stage', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6119', name='Ciliary Body Epithelioid Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4558', name='Ciliary Body Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C35783', name='Ciliary Body Mixed Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6117', name='Ciliary Body Spindle Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C111020', name='Class 1 Uveal Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C111021', name='Class 2 Uveal Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137647', name='Clinical Stage 0 Cutaneous Melanoma AJCC v8', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137648', name='Clinical Stage I Cutaneous Melanoma AJCC v8', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137651', name='Clinical Stage II Cutaneous Melanoma AJCC v8', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137655', name='Clinical Stage III Cutaneous Melanoma AJCC v8', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137656', name='Clinical Stage IV Cutaneous Melanoma AJCC v8', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4550', name='Conjunctival Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4553', name='Corneal Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C128801', name='Cutaneous Malignant Melanoma 2', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C90514', name='Cutaneous Melanoma by AJCC v6 Stage', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C91231', name='Cutaneous Melanoma by AJCC v7 Stage', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137646', name='Cutaneous Melanoma by AJCC v8 Clinical Stage', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137657', name='Cutaneous Melanoma by AJCC v8 Pathologic Stage', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C137645', name='Cutaneous Melanoma by AJCC v8 Stage', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C155305', name='Cutaneous Melanoma of the Extremity', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3510', name='Cutaneous Melanoma', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4225', name='Cutaneous Nodular Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C37257', name='Desmoplastic Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C48614', name='Desmoplastic Neurotropic Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4236', name='Epithelioid Cell Melanoma', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C35780', name='Epithelioid Cell Uveal Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C5707', name='Esophageal Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4358', name='Eyelid Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C5735', name='Gallbladder Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C178519', name='Gastric Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8498', name='Hereditary Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C165659', name='High-CSD Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6100', name='Intermediate Cell Type Choroid Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6118', name='Intermediate Cell Type Ciliary Body Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6101', name='Intermediate Cell Type Iris Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7989', name='Intermediate Cell Type Uveal Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C5442', name='Intracranial Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C48607', name='Invasive Cutaneous Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C174498', name='Iris Epithelioid Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9088', name='Iris Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C174506', name='Iris Mixed Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6098', name='Iris Spindle Cell Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C175345', name='Lacrimal Drainage System Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9151', name='Lentigo Maligna Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C43372', name='Lentigo Maligna', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C171285', name='Locally Advanced Cutaneous Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C148494', name='Locally Advanced Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C171297', name='Locally Advanced Non-Cutaneous Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C171296', name='Locally Advanced Ocular Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9152', name='Low-CSD Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C45652', name='Lung Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C66753', name='Malignant Melanoma in Precancerous Melanosis', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9090', name='Medium/Large Size Posterior Uveal Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4240', name='Melanoma Arising from Blue Nevus', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4235', name='Melanoma Arising in Giant Congenital Nevus', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C48613', name='Melanoma in Congenital Melanocytic Nevus', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4232', name='Melanoma in Junctional Nevus', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C179206', name='Melanoma Metastatic in the Brain', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C133504', name='Melanoma Metastatic in the Central Nervous System', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C154473', name='Melanoma of Unknown Primary', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9499', name='Melanomatosis', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C5317', name='Meningeal Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C6891', name='Meningeal Melanomatosis', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C179427', name='Metastatic Acral Lentiginous Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C169085', name='Metastatic Choroid Melanoma', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C156072', name='Metastatic Cutaneous Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C8925', name='Metastatic Melanoma', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C169086', name='Metastatic Mucosal Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7092', name='Metastatic Non-Cutaneous Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C171295', name='Metastatic Ocular Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C148514', name='Metastatic Uveal Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C48612', name='Minimal Deviation Melanoma', terminology=None, version=None, level=2, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C35781', name='Mixed Cell Uveal Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C66756', name='Mixed Epithelioid and Spindle Cell Melanoma', terminology=None, version=None, level=1, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C48622', name='Mucosal Lentiginous Melanoma', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=True, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7091', name='Mucosal Melanoma of the Digestive System', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C178437', name='Mucosal Melanoma of the Female Genital Tract', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C178443', name='Mucosal Melanoma of the Genitourinary System', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C133186', name='Mucosal Melanoma of the Head and Neck by AJCC v7 Stage', terminology=None, version=None, level=4, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C133187', name='Mucosal Melanoma of the Head and Neck', terminology=None, version=None, level=3, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=False, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get all properties

Return all properties for a given terminology with default include setting (minimal).

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_properties

2024-07-03T16:31:33.506 INFO : Get all properties for a terminology &/or list of codes/labels - ncit
2024-07-03T16:31:33.506 INFO :     properties - [Concept(uri=None, ct=None, code='oboInOwl:hasDbXref', name='xRef', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NHC0', name='code', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P100', name='OMIM_Number', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P101', name='Homologous_Gene', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P102', name='GenBank_Accession_Number', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P106', name='Semantic_Type', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P107', name='Display_Name', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P108', name='Preferred_Name', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P167', name='Image_Link', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P171', name='PubMedID_Primary_Reference', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P175', name='NSC Number', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P200', name='OLD_PARENT', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P201', name='OLD_CHILD', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P203', name='OLD_KIND', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P204', name='OLD_ROLE', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P205', name='OLD_STATE', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P207', name='UMLS_CUI', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P208', name='NCI_META_CUI', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P210', name='CAS_Registry', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P211', name='GO_Annotation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P215', name='KEGG_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P216', name='BioCarta_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P302', name='Accepted_Therapeutic_Use_For', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P310', name='Concept_Status', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P315', name='SNP_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P316', name='Relative_Enzyme_Activity', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P317', name='FDA_Table', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P319', name='FDA_UNII_Code', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P320', name='OID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P321', name='EntrezGene_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P322', name='Contributing_Source', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P325', name='ALT_DEFINITION', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P329', name='PDQ_Open_Trial_Search_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P330', name='PDQ_Closed_Trial_Search_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P331', name='NCBI_Taxon_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P332', name='MGI_Accession_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P333', name='Use_For', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P334', name='ICD-O-3_Code', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P350', name='Chemical_Formula', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P351', name='US_Recommended_Intake', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P352', name='Tolerable_Level', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P353', name='INFOODS', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P354', name='USDA_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P355', name='Unit', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P356', name='Essential_Amino_Acid', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P357', name='Essential_Fatty_Acid', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P358', name='Nutrient', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P359', name='Micronutrient', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P360', name='Macronutrient', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P361', name='Extensible_List', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P362', name='miRBase_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P363', name='Neoplastic_Status', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P364', name='OLD_ASSOCIATION', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P366', name='Legacy Concept Name', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P367', name='PID_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P368', name='CHEBI_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P369', name='HGNC_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P371', name='NICHD_Hierarchy_Term', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P372', name='Publish_Value_Set', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P374', name='Value_Set_Location', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P375', name='Maps_To', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P376', name='Term_Browser_Value_Set_Description', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P398', name='Value_Set_Pair', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P399', name='NCI_Drug_Dictionary_ID', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P90', name='FULL_SYN', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P92', name='Subsource', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P93', name='Swiss_Prot', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P96', name='Gene_Encodes_Product', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P97', name='DEFINITION', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P98', name='DesignNote', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get property by code or label

Return property for the specified code or label.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_property

2024-07-03T16:31:33.529 INFO : Get full property for code - P216
2024-07-03T16:31:33.529 INFO :     property - uri=None ct=None code='P216' name='BioCarta_ID' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status=None source=None leaf=None active=None synonyms=[Synonym(uri=None, ct=None, name='BioCarta ID', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='BioCarta_ID', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='BioCarta_ID', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)] definitions=[Definition(uri=None, ct=None, definition='A property representing the BioCarta ID code for a pathway. It can be used to link a BioCarta pathway reference to the primary pathway information.', highlight=None, type='DEFINITION', source=None, qualifiers=None)] history=None properties=[ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Conceptual Entity', highlight=None, qualifiers=None, source=None)] children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Get all qualifiers

Return all qualifiers for a given terminology with default include setting (minimal).

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_qualifiers

2024-07-03T16:31:33.673 INFO : Get all qualifiers for terminology - ncit
2024-07-03T16:31:33.673 INFO :     qualifiers - [Concept(uri=None, ct=None, code='P383', name='term-group', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P384', name='term-source', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P378', name='Definition Source', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P381', name='attribution', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P385', name='Source Code', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P386', name='Subsource Name', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P387', name='go-id', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P389', name='go-evi', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P390', name='go-source', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P391', name='source-date', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P393', name='Relationship_to_Target', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P394', name='Target_Term_Type', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P395', name='Target_Code', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P396', name='Target_Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P397', name='Target_Terminology_Version', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get qualifier by code (or label)

Return qualifier for the specified code or label.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_qualifier

2024-07-03T16:31:33.608 INFO : Get minimal qualifier for code - P390
2024-07-03T16:31:33.608 INFO :     qualifier - uri=None ct=None code='P390' name='go-source' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status=None source=None leaf=None active=None synonyms=[Synonym(uri=None, ct=None, name='go-source', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)] definitions=[Definition(uri=None, ct=None, definition='A property representing the organization that is the supplier or owner of each GO_Annotation associated with a concept.', highlight=None, type='DEFINITION', source=None, qualifiers=None)] history=None properties=[ModelProperty(uri=None, ct=None, type='required', value='true', highlight=None, qualifiers=None, source=None)] children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Get qualifier values by code (or label)

Return distinct value set for the qualifier with the specified code or label.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_qualifier_values

2024-07-03T16:31:33.646 INFO : Get qualifier values for code - P390
2024-07-03T16:31:33.646 INFO :     qualifier values - ['CGAP']

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Get all roles

Return all roles.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_roles

2024-07-03T16:31:33.699 INFO : Get all roles for terminology - ncit
2024-07-03T16:31:33.699 INFO :     roles - [Concept(uri=None, ct=None, code='R100', name='Disease_Has_Associated_Anatomic_Site', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R101', name='Disease_Has_Primary_Anatomic_Site', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R102', name='Disease_Has_Metastatic_Anatomic_Site', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R103', name='Disease_Has_Normal_Tissue_Origin', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R104', name='Disease_Has_Normal_Cell_Origin', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R105', name='Disease_Has_Abnormal_Cell', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R106', name='Disease_Has_Molecular_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R107', name='Disease_Has_Cytogenetic_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R108', name='Disease_Has_Finding', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R110', name='Disease_Is_Grade', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R111', name='Disease_May_Have_Normal_Tissue_Origin', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R112', name='Disease_May_Have_Normal_Cell_Origin', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R113', name='Disease_May_Have_Abnormal_Cell', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R114', name='Disease_May_Have_Cytogenetic_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R115', name='Disease_May_Have_Finding', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R116', name='Disease_May_Have_Associated_Disease', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R122', name='Chemical_Or_Drug_Is_Metabolized_By_Enzyme', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R123', name='Chemotherapy_Regimen_Has_Component', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R124', name='Chemical_Or_Drug_Has_Mechanism_Of_Action', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R125', name='Chemical_Or_Drug_Has_Physiologic_Effect', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R126', name='Disease_Has_Associated_Disease', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R130', name='Gene_Is_Element_In_Pathway', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R131', name='Gene_Product_Is_Element_In_Pathway', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R132', name='Gene_Has_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R133', name='Gene_Product_Has_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R135', name='Disease_Excludes_Primary_Anatomic_Site', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R136', name='Disease_Excludes_Metastatic_Anatomic_Site', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R137', name='Disease_Excludes_Normal_Tissue_Origin', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R138', name='Disease_Excludes_Normal_Cell_Origin', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R139', name='Disease_Excludes_Abnormal_Cell', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R140', name='Disease_Excludes_Molecular_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R141', name='Disease_Excludes_Cytogenetic_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R142', name='Disease_Excludes_Finding', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R145', name='Gene_Has_Physical_Location', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R146', name='Chemical_Or_Drug_Affects_Gene_Product', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R150', name='Chemical_Or_Drug_Affects_Abnormal_Cell', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R153', name='Allele_Has_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R155', name='Allele_In_Chromosomal_Location', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R40', name='Gene_In_Chromosomal_Location', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R156', name='Allele_Absent_From_Wild-type_Chromosomal_Location', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R158', name='Allele_Plays_Altered_Role_In_Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R37', name='Gene_Plays_Role_In_Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R159', name='Allele_Has_Activity', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R160', name='Allele_Plays_Role_In_Metabolism_Of_Chemical_Or_Drug', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R163', name='Procedure_Has_Target_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R165', name='Procedure_Has_Imaged_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R166', name='Procedure_May_Have_Excised_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R167', name='Procedure_Has_Excised_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R168', name='Procedure_May_Have_Partially_Excised_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R169', name='Procedure_Has_Partially_Excised_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R170', name='Procedure_May_Have_Completely_Excised_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R171', name='Procedure_Has_Completely_Excised_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R172', name='Regimen_Has_Accepted_Use_For_Disease', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R173', name='Cytogenetic_Abnormality_Involves_Chromosome', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R174', name='Disease_Mapped_To_Chromosome', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R175', name='Gene_Involved_In_Pathogenesis_Of_Disease', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R176', name='Disease_Mapped_To_Gene', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R177', name='Molecular_Abnormality_Involves_Gene', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R178', name='Gene_Mutant_Encodes_Gene_Product_Sequence_Variation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R179', name='Gene_Product_Sequence_Variation_Encoded_By_Gene_Mutant', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R182', name='Gene_Product_Variant_Of_Gene_Product', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R23', name='EO_Disease_Has_Associated_Cell_Type', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R24', name='EO_Disease_Maps_To_Human_Disease', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R25', name='EO_Disease_Has_Associated_EO_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R26', name='EO_Disease_Has_Property_Or_Attribute', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R27', name='Conceptual_Part_Of', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R28', name='Biological_Process_Has_Initiator_Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R29', name='Biological_Process_Has_Result_Chemical_Or_Drug', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R30', name='Biological_Process_Has_Associated_Location', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R31', name='Biological_Process_Has_Result_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R32', name='Biological_Process_Has_Initiator_Chemical_Or_Drug', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R34', name='Biological_Process_Has_Result_Biological_Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R35', name='Biological_Process_Is_Part_Of_Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R36', name='Gene_Is_Biomarker_Type', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R38', name='Gene_Associated_With_Disease', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R39', name='R39', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R41', name='Gene_Found_In_Organism', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R42', name='Gene_Product_Is_Biomarker_Type', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R44', name='Gene_Product_Has_Chemical_Classification', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R45', name='Gene_Product_Has_Organism_Source', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R46', name='Gene_Product_Has_Associated_Anatomy', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R47', name='Gene_Product_Is_Biomarker_Of', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R48', name='Gene_Product_Malfunction_Associated_With_Disease', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R49', name='Gene_Product_Expressed_In_Tissue', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R50', name='Gene_Product_Has_Structural_Domain_Or_Motif', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R51', name='Gene_Product_Is_Physical_Part_Of', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R52', name='Gene_Product_Has_Biochemical_Function', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R53', name='Gene_Product_Plays_Role_In_Biological_Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R54', name='Gene_Product_Encoded_By_Gene', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R66', name='Chemical_Or_Drug_Plays_Role_In_Biological_Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R72', name='Chemical_Or_Drug_Affects_Cell_Type_Or_Tissue', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R81', name='Anatomic_Structure_Has_Location', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R82', name='Anatomic_Structure_Is_Physical_Part_Of', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R88', name='Disease_Is_Stage', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='R89', name='Disease_May_Have_Molecular_Abnormality', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get roles by code (or label)

Returns a role definition for a specified code.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_role

2024-07-03T16:31:33.690 INFO : Get summary role for code - R123
2024-07-03T16:31:33.690 INFO :     role - uri=None ct=None code='R123' name='Chemotherapy_Regimen_Has_Component' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status=None source=None leaf=None active=None synonyms=[Synonym(uri=None, ct=None, name='Has Component', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Chemotherapy_Regimen_Has_Component', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Chemotherapy_Regimen_Has_Component', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)] definitions=[Definition(uri=None, ct=None, definition="A role used to specify the component agents which are used in a particular chemotherapy regimen or agent combination. The domain and the range for this role are 'Chemotherapy Regimen or Agent Combination' and 'Drug, Food, Chemical or Biomedical Material', respectively.", highlight=None, type='DEFINITION', source=None, qualifiers=None)] history=None properties=[ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Conceptual Entity', highlight=None, qualifiers=None, source=None)] children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Get all associations

Return all associations.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_associations

2024-07-03T16:31:33.448 INFO : Get all associations for terminology - ncit
2024-07-03T16:31:33.449 INFO :     associations - [Concept(uri=None, ct=None, code='A1', name='Role_Has_Domain', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A12', name='Has_Data_Element', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A13', name='Related_To_Genetic_Biomarker', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A14', name='Neoplasm_Has_Special_Category', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A15', name='Has_CTCAE_5_Parent', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A16', name='Has_INC_Parent', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A17', name='Has_Pharmaceutical_State_Of_Matter', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A18', name='Has_Pharmaceutical_Basic_Dose_Form', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A19', name='Has_Pharmaceutical_Administration_Method', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A2', name='Role_Has_Range', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A20', name='Has_Pharmaceutical_Intended_Site', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A21', name='Has_Pharmaceutical_Release_Characteristics', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A22', name='Has_Pharmaceutical_Transformation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A23', name='Has_PCDC_Data_Type', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A24', name='Is_PCDC_AML_Permissible_Value_For_Variable', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A25', name='Value_Set_Is_Paired_With', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A26', name='Has_PCDC_AML_Permissible_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A27', name='Has_CTDC_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A28', name='Is_PCDC_EWS_Permissible_Value_For_Variable', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A29', name='Has_PCDC_EWS_Permissible_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A3', name='Role_Has_Parent', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A30', name='Has_ICDC_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A31', name='Has_GDC_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A32', name='Is_Value_For_GDC_Property', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A33', name='Is_PCDC_GCT_Permissible_Value_For_Variable', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A34', name='Has_PCDC_GCT_Permissible_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A35', name='Is_PCDC_ALL_Permissible_Value_For_Variable', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A36', name='Has_PCDC_ALL_Permissible_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A37', name='Has_SeroNet_Permissible_Value', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A4', name='Qualifier_Applies_To', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A5', name='Has_Salt_Form', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A6', name='Has_Free_Acid_Or_Base_Form', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A7', name='Has_Target', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A8', name='Concept_In_Subset', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='A9', name='Is_Related_To_Endogenous_Product', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get associations by code (or label)

Returns associations for a specified code.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_association_by_code

2024-07-03T16:31:33.444 INFO : Get all associations for code - A18
2024-07-03T16:31:33.444 INFO :     associations - uri=None ct=None code='A18' name='Has_Pharmaceutical_Basic_Dose_Form' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status=None source=None leaf=None active=None synonyms=None definitions=None history=None properties=None children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Get all term types

Return metadata for all term types for the specified terminology.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_term_types

2024-07-03T16:31:33.750 INFO : Get all term types for terminology - ncit
2024-07-03T16:31:33.751 INFO :     term types - [ConceptMinimal(uri=None, ct=None, code='AB', name='Abbreviation', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='AD', name='Adjectival form (and other parts of grammar)', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='AQ', name='*Antiquated preferred term', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='AQS', name='Antiquated term, use when there are antiquated synonyms within a concept', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BR', name='US brand name, which may be trademarked', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CA2', name='ISO 3166 alpha-2 country code', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CA3', name='ISO 3166 alpha-3 country code', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CI', name='ISO country code', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CN', name='Drug study code', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CNU', name='ISO 3166 numeric country code', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CS', name='US State Department country code', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='DN', name='Display name', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='FB', name='Foreign brand name, which may be trademarked', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='HD', name='*Header (groups concepts, but not used for coding data)', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='LLT', name='Lower level term', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='PT', name='*Preferred term', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='SN', name='Chemical structure name', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='SY', name='Synonym', terminology='ncit', version='21.06e', level=None)]

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Get all synonym sources

Return metadata for all synonym sources for the specified terminology.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_synonym_sources

2024-07-03T16:31:33.724 INFO : Get all synonym sources for terminology - ncit
2024-07-03T16:31:33.724 INFO :     synonym - [ConceptMinimal(uri=None, ct=None, code='ACC/AHA', name='American College of Cardiology / American Heart Association', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BIOCARTA', name='BioCarta online maps of molecular pathways, adapted for NCI use', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BRIDG', name='Biomedical Research Integrated Domain Model Group', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BRIDG 3.0.3', name='Biomedical Research Integrated Domain Model Group, version 3.0.3', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BRIDG 5.3', name='Biomedical Research Integrated Domain Model Group, version 5.3', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CBDD', name='Chemical Biology and Drug Development', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CCPS', name='Childhood Cancer Predisposition Study', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CDC', name='U.S. Centers for Disease Control and Prevention', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CDISC', name='Clinical Data Interchange Standards Consortium', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CDISC-GLOSS', name='CDISC Glossary Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CPTAC', name='Clinical Proteomic Tumor Analysis Consortium', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CRCH', name='Cancer Research Center of Hawaii Nutrition Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTCAE', name='Common Terminology Criteria for Adverse Events', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTCAE 3.0', name='Common Terminology Criteria for Adverse Events, version 3.0', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTCAE 5.0', name='Common Terminology Criteria for Adverse Events, version 5.0', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTDC', name='Clinical Trials Data Commons', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTEP', name='Cancer Therapy Evaluation Program', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTRP', name='Clinical Trials Reporting Program', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CareLex', name='CareLex electronic Trial Master File Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='Cellosaurus', name='Cellosaurus - a knowledge resource on cell lines', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='DCP', name='NCI Division of Cancer Prevention Program', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='DICOM', name='Digital Imaging Communications in Medicine', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='DTP', name='NCI Developmental Therapeutics Program', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='EDQM-HC', name='European Directorate for the Quality of Medicines & Healthcare', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='FDA', name='U.S. Food and Drug Administration', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='GAIA', name='Global Alignment of Immunization safety Assessment in pregnancy Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='GDC', name='Genomic Data Commons', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='GENC', name='Geopolitical Entities, Names, and Codes Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='HGNC', name='HUGO Gene Nomenclature Committee', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='HL7', name='Health Level Seven International', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='ICDC', name='International Cancer Genome Consortium', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='ICH', name='International Conference on Harmonization', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='INC', name='International Neonatal Consortium', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='JAX', name='Jackson Laboratories Mouse Terminology, adapted for NCI use', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='KEGG', name='KEGG Pathway Database', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NCI', name='National Cancer Institute Thesaurus', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NCI-GLOSS', name='NCI Dictionary of Cancer Terms', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NCPDP', name='National Council for Prescription Drug Programs', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NDC', name='National Drug Code', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NICHD', name='National Institute of Child Health and Human Development', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='PCDC', name='Pediatric Cancer Data Commons', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='PI-RADS', name='Prostate Imaging-Reporting and Data System', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='PID', name='NCI Nature Pathway Interaction Database', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='RENI', name='Registry Nomenclature Information System', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='SEER', name='Surveillance, Epidemiology, and End Results Program', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='SeroNet', name='NCI Serological Sciences Network for COVID-19', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='UCUM', name='Unified Code for Units of Measure', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='WHO', name='World Health Organization', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='ZFin', name='Zebrafish Information Network', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='caDSR', name='Cancer Data Standards Registry and Repository', terminology='ncit', version='21.06e', level=None)]

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Get all definition sources

Return metadata for all definition sources for the specified terminology.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_definition_sources

2024-07-03T16:31:33.465 INFO : Get all definition sources for terminology - ncit
2024-07-03T16:31:33.465 INFO :     definition sources - [ConceptMinimal(uri=None, ct=None, code='ACC/AHA', name='American College of Cardiology / American Heart Association', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BIOCARTA', name='BioCarta online maps of molecular pathways, adapted for NCI use', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BRIDG', name='Biomedical Research Integrated Domain Model Group', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BRIDG 3.0.3', name='Biomedical Research Integrated Domain Model Group, version 3.0.3', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='BRIDG 5.3', name='Biomedical Research Integrated Domain Model Group, version 5.3', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CCPS', name='Childhood Cancer Predisposition Study', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CDISC', name='Clinical Data Interchange Standards Consortium', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CDISC-GLOSS', name='CDISC Glossary Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CRCH', name='Cancer Research Center of Hawaii Nutrition Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTCAE', name='Common Terminology Criteria for Adverse Events', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTCAE 3.0', name='Common Terminology Criteria for Adverse Events, version 3.0', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTCAE 5.0', name='Common Terminology Criteria for Adverse Events, version 5.0', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CTEP', name='Cancer Therapy Evaluation Program', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='CareLex', name='CareLex electronic Trial Master File Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='DICOM', name='Digital Imaging Communications in Medicine', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='EDQM-HC', name='European Directorate for the Quality of Medicines & Healthcare', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='FDA', name='U.S. Food and Drug Administration', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='GAIA', name='Global Alignment of Immunization safety Assessment in pregnancy Terminology', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='ICDO3', name='International Classification of Diseases for Oncology, 3rd edition', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='INC', name='International Neonatal Consortium', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='KEGG', name='KEGG Pathway Database', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='MMHCC', name='Mouse Models of Human Cancer Consortium', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NCI', name='National Cancer Institute Thesaurus', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NCI-GLOSS', name='NCI Dictionary of Cancer Terms', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='NICHD', name='National Institute of Child Health and Human Development', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='PCDC', name='Pediatric Cancer Data Commons', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='PQCMC', name='Pharmaceutical Quality/Chemistry, Manufacturing, and Controls', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='UMD2001', name='Universal Medical Device Nomenclature System, Version 2001', terminology='ncit', version='21.06e', level=None), ConceptMinimal(uri=None, ct=None, code='UWDA142', name='University of Washington Digital Anatomist, Version 1.4.2', terminology='ncit', version='21.06e', level=None)]

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Get all definition types

Return metadata for all definition types for the specified terminology.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_definition_types

2024-07-03T16:31:33.495 INFO : Get all definition types for terminology - ncit
2024-07-03T16:31:33.495 INFO :     definition types - [Concept(uri=None, ct=None, code='P325', name='ALT_DEFINITION', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P97', name='DEFINITION', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get definition type by code

Get definition type by code. Include parameter allowed customizing how much data to return.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_definition_type_by_code

2024-07-03T16:31:33.486 INFO : Get definition type for code - P325
2024-07-03T16:31:33.486 INFO :     definition type - uri=None ct=None code='P325' name='ALT_DEFINITION' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status=None source=None leaf=None active=None synonyms=None definitions=None history=None properties=None children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Get all synonym types

Return metadata for all synonym types for the specified terminology.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_synonym_types

2024-07-03T16:31:33.744 INFO : Get all synonym types for terminology - ncit
2024-07-03T16:31:33.745 INFO :     synonym types - [Concept(uri=None, ct=None, code='P107', name='Display_Name', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=[Synonym(uri=None, ct=None, name='Display Name', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Display Name', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Display_Name', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Display_Name', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)], definitions=[Definition(uri=None, ct=None, definition='A property representing an alternative Preferred Name for use in some NCI systems.', highlight=None, type='DEFINITION', source=None, qualifiers=None)], history=None, properties=[ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Conceptual Entity', highlight=None, qualifiers=None, source=None)], children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P108', name='Preferred_Name', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=[Synonym(uri=None, ct=None, name='Preferred Name', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Preferred Name', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Preferred Term', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Preferred_Name', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Preferred_Name', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)], definitions=[Definition(uri=None, ct=None, definition='A property representing the word or phrase that NCI uses by preference to refer to the concept.', highlight=None, type='DEFINITION', source=None, qualifiers=None)], history=None, properties=[ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Conceptual Entity', highlight=None, qualifiers=None, source=None)], children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='P90', name='FULL_SYN', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=[Synonym(uri=None, ct=None, name='Term & Source Data', highlight=None, term_type=None, type='Display_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='FULL_SYN', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='Synonym with Source Data', highlight=None, term_type=None, type='FULL_SYN', source=None, code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='FULL_SYN', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)], definitions=[Definition(uri=None, ct=None, definition='A property representing a fully qualified synonym, contains the string, term type, source, and an optional source code if appropriate. Each subfield is deliniated to facilitate interpretation by software.', highlight=None, type='DEFINITION', source=None, qualifiers=None)], history=None, properties=[ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Conceptual Entity', highlight=None, qualifiers=None, source=None)], children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]

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Get synonym types by code

Return metadata for all synonym types for the specified terminology.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_synonym_type_by_code

2024-07-03T16:31:33.735 INFO : Get synonym type for code - P90
2024-07-03T16:31:33.735 INFO :     synonym - uri=None ct=None code='P90' name='FULL_SYN' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status=None source=None leaf=None active=None synonyms=None definitions=None history=None properties=None children=None parents=None descendants=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None maps=None paths=None

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Find root concepts

Return all root concepts for the specified terminology.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_roots

2025-02-27T15:25:11.510 INFO : Get root concepts for terminology - ncit
2025-02-27T15:25:11.511 INFO :    root concepts = [Concept(uri=None, ct=None, code='C12913', name='Abnormal Cell', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C43431', name='Activity', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C12219', name='Anatomic Structure, System, or Substance', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C20633', name='Biochemical Pathway', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C17828', name='Biological Process', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C12218', name='Chemotherapy Regimen or Agent Combination', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, 
associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C20181', name='Conceptual Entity', 
terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C20047', name='Diagnostic or Prognostic Factor', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7057', name='Disease, Disorder or Finding', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C1908', name='Drug, Food, Chemical or Biomedical Material', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C22188', name='Experimental Organism Anatomical Concept', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C22187', name='Experimental Organism Diagnosis', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C16612', name='Gene', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C26548', name='Gene Product', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, 
children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C97325', name='Manufactured Object', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3910', name='Molecular Abnormality', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, 
qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C14250', name='Organism', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C20189', name='Property or Attribute', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C28428', name='Retired Concept', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Get paths to/from root from a code

Return paths to/from the root concept from a specified terminology and code.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_paths_to_root

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_paths_from_root

2024-07-02T13:56:44.542 INFO : Get paths to hierarchy root for code - C3224
2024-07-02T13:56:44.542 INFO :    paths to root = [[Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=0, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7058', name='Melanocytic Neoplasm', terminology='ncit', version='21.06e', level=1, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4741', name='Neoplasm by Morphology', terminology='ncit', version='21.06e', level=2, highlight=None, subset_link=None, mapset_link=None, concept_status='Header_Concept', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3262', name='Neoplasm', terminology='ncit', version='21.06e', level=3, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C2991', name='Disease or Disorder', terminology='ncit', version='21.06e', level=4, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7057', name='Disease, Disorder or Finding', terminology='ncit', version='21.06e', level=5, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)], [Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=0, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9305', name='Malignant Neoplasm', terminology='ncit', version='21.06e', level=1, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7062', name='Neoplasm by Special Category', terminology='ncit', version='21.06e', level=2, highlight=None, subset_link=None, mapset_link=None, concept_status='Header_Concept', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3262', name='Neoplasm', terminology='ncit', version='21.06e', level=3, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C2991', name='Disease or Disorder', terminology='ncit', version='21.06e', level=4, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7057', name='Disease, Disorder or Finding', terminology='ncit', version='21.06e', level=5, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]]

2024-07-02T13:56:44.386 INFO : Get paths from hierarchy root for code - C3224
2024-07-02T13:56:44.386 INFO :    paths from root = [[Concept(uri=None, ct=None, code='C7057', name='Disease, Disorder or Finding', terminology='ncit', version='21.06e', level=0, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C2991', name='Disease or Disorder', terminology='ncit', version='21.06e', level=1, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3262', name='Neoplasm', terminology='ncit', version='21.06e', level=2, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4741', name='Neoplasm by Morphology', terminology='ncit', version='21.06e', level=3, highlight=None, subset_link=None, mapset_link=None, concept_status='Header_Concept', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7058', name='Melanocytic Neoplasm', terminology='ncit', version='21.06e', level=4, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=5, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)], [Concept(uri=None, ct=None, code='C7057', name='Disease, Disorder or Finding', terminology='ncit', version='21.06e', level=0, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C2991', name='Disease or Disorder', terminology='ncit', version='21.06e', level=1, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3262', name='Neoplasm', terminology='ncit', version='21.06e', level=2, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7062', name='Neoplasm by Special Category', terminology='ncit', version='21.06e', level=3, highlight=None, subset_link=None, mapset_link=None, concept_status='Header_Concept', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9305', name='Malignant Neoplasm', terminology='ncit', version='21.06e', level=4, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=5, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]]

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Get paths to an ancestor code from a code

Return paths to the root concept for a specified terminology and code.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_paths_to_ancestor

2024-07-02T13:56:44.452 INFO : Get paths from code to ancestor code - C3224 to C2991
2024-07-02T13:56:44.452 INFO :    paths to ancestor code = [[Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=0, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7058', name='Melanocytic Neoplasm', terminology='ncit', version='21.06e', level=1, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4741', name='Neoplasm by Morphology', terminology='ncit', version='21.06e', level=2, highlight=None, subset_link=None, mapset_link=None, concept_status='Header_Concept', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3262', name='Neoplasm', terminology='ncit', version='21.06e', level=3, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C2991', name='Disease or Disorder', terminology='ncit', version='21.06e', level=4, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)], [Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=0, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C9305', name='Malignant Neoplasm', terminology='ncit', version='21.06e', level=1, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C7062', name='Neoplasm by Special Category', terminology='ncit', version='21.06e', level=2, highlight=None, subset_link=None, mapset_link=None, concept_status='Header_Concept', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3262', name='Neoplasm', terminology='ncit', version='21.06e', level=3, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C2991', name='Disease or Disorder', terminology='ncit', version='21.06e', level=4, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)]]

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Get subtree for code

Return an entire subtree graph from the root concepts to a specified node. This call is specifically tuned to support a tree-view based hierarchy browser in a UI.

pytest tests/test_concept_endpoints_api.py::TestConceptEndpointsApi::test_get_subtree

2024-07-02T13:56:45.014 INFO : Get the entire subtree from root to node for code - C3224
2024-07-02T13:56:45.015 INFO :    subtree = [HierarchyNode(uri=None, ct=None, code='C12913', label='Abnormal Cell', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C43431', label='Activity', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C12219', label='Anatomic Structure, System, or Substance', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C20633', label='Biochemical Pathway', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C17828', label='Biological Process', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C12218', label='Chemotherapy Regimen or Agent Combination', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C20181', label='Conceptual Entity', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C20047', label='Diagnostic or Prognostic Factor', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7057', label='Disease, Disorder or Finding', level=None, leaf=False, expanded=True, children=[HierarchyNode(uri=None, ct=None, code='C2991', label='Disease or Disorder', level=None, leaf=False, expanded=True, children=[HierarchyNode(uri=None, ct=None, code='C35470', label='Behavioral Disorder', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8278', label='Cancer-Related Condition', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C27551', label='Disorder by Site', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3101', label='Genetic Disorder', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3262', label='Neoplasm', level=None, leaf=False, expanded=True, children=[HierarchyNode(uri=None, ct=None, code='C4741', label='Neoplasm by Morphology', level=None, leaf=False, expanded=True, children=[HierarchyNode(uri=None, ct=None, code='C3709', label='Epithelial Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3708', label='Germ Cell Tumor', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7069', label='Giant Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C27134', label='Hematopoietic and Lymphoid Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7058', label='Melanocytic Neoplasm', level=None, leaf=False, expanded=True, children=[HierarchyNode(uri=None, ct=None, code='C5504', label='Central Nervous System Melanocytic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C173488', label='Head and Neck Melanocytic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7570', label='Melanocytic Nevus', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C9498', label='Melanocytoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3224', label='Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7161', label='Skin Melanocytic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C40335', label='Vulvar Melanocytic Neoplasm', level=None, leaf=False, expanded=None, children=None)]), HierarchyNode(uri=None, ct=None, code='C6971', label='Meningothelial Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7059', label='Mesenchymal Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3786', label='Mesothelial Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C6974', label='Neoplasm of Uncertain Histogenesis', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C35562', label='Neuroepithelial, Perineurial, and Schwann Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3422', label='Trophoblastic Tumor', level=None, leaf=False, expanded=None, children=None)]), HierarchyNode(uri=None, ct=None, code='C3263', label='Neoplasm by Site', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7062', label='Neoplasm by Special Category', level=None, leaf=False, expanded=True, children=[HierarchyNode(uri=None, ct=None, code='C3677', label='Benign Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C6283', label='Childhood Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C6784', label='Cystic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3264', label='Embryonal Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36035', label='Encapsulated Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7201', label='Infrequent Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C116915', label='Liquid Tumor', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36037', label='Localized Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C9305', label='Malignant Neoplasm', level=None, leaf=False, expanded=True, children=[HierarchyNode(uri=None, ct=None, code='C3851', label='Aggravated Malignant Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36025', label='Anaplastic Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7627', label='Bilateral Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C2916', label='Carcinoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4005', label='Childhood Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C2948', label='Choriocarcinoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4992', label='Environment-Related Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C81758', label='Fibroblastic Reticular Cell Tumor', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C9479', label='Hereditary Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C27770', label='Immunodeficiency-Related Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C27223', label='Infection-Related Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8505', label='Invasive Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3161', label='Leukemia', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8576', label='Localized Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3208', label='Lymphoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C156714', label='Malignant Abdominal Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7586', label='Malignant Basal Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C35501', label='Malignant Bone Marrow Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C9335', label='Malignant Breast Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C114940', label='Malignant Cardiovascular Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4890', label='Malignant Digestive System Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3575', label='Malignant Endocrine Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4767', label='Malignant Eye Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C121500', label='Malignant Fibrohistiocytic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C156484', label='Malignant Genitourinary System Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4925', label='Malignant Germ Cell Tumor', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4090', label='Malignant Giant Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4013', label='Malignant Head and Neck Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C35812', label='Malignant Lymph Node Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8991', label='Malignant Mastocytosis', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4456', label='Malignant Mesothelioma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3729', label='Malignant Mixed Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C166357', label='Malignant Musculoskeletal Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36041', label='Malignant Neoplasm by Grade', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C35427', label='Malignant Neoplasm of Multiple Primary Sites', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C65153', label='Malignant Neoplasm, Uncertain Whether Primary or Metastatic', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4788', label='Malignant Nervous System Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C156715', label='Malignant Pelvic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C156711', label='Malignant Peritoneal and Retroperitoneal Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4571', label='Malignant Respiratory System Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C2920', label='Malignant Skin Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4867', label='Malignant Soft Tissue Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C132146', label='Malignant Solid Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C6894', label='Malignant Solitary Fibrous Tumor', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3539', label='Malignant Splenic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3576', label='Malignant Thoracic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3224', label='Melanoma', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C38156', label='Metachronous Malignant Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36049', label='Moderately Differentiated Malignant Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7151', label='Monoclonal Immunoglobulin Deposition Disease', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=73, code=None, label=None, level=None, leaf=None, expanded=None, children=None)]), HierarchyNode(uri=None, ct=None, code='C3261', label='Metastatic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C102883', label='Miscellaneous Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C6930', label='Mixed Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36029', label='Necrotic Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C27933', label='Neoplasm by Cause', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C45230', label='Neoplasm by Obsolete Classification', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3646', label='Neoplasm of Uncertain Malignant Potential', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C65157', label='Neoplasm, Uncertain Whether Benign or Malignant', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7068', label='Neoplastic Polyp', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36012', label='Nodular Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36036', label='Non-Encapsulated Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C163003', label='Non-Malignant Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36030', label='Osteolytic Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36031', label='Papillary Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36032', label='Premalignant Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C8509', label='Primary Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4798', label='Recurrent Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C7628', label='Refractory Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36255', label='Secondary Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C9292', label='Solid Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C27263', label='Spindle Cell Neoplasm', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36033', label='Tubular Neoplasm', level=None, leaf=True, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C36034', label='Villous Neoplasm', level=None, leaf=True, expanded=None, children=None)])]), HierarchyNode(uri=None, ct=None, code='C53529', label='Non-Neoplastic Disorder', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C89328', label='Pediatric Disorder', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3340', label='Polyp', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C2893', label='Psychiatric Disorder', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C26684', label='Radiation-Induced Disorder', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C4873', label='Rare Disorder', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C28193', label='Syndrome', level=None, leaf=False, expanded=None, children=None)]), HierarchyNode(uri=None, ct=None, code='C3367', label='Finding', level=None, leaf=False, expanded=None, children=None)]), HierarchyNode(uri=None, ct=None, code='C1908', label='Drug, Food, Chemical or Biomedical Material', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C22188', label='Experimental Organism Anatomical Concept', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C22187', label='Experimental Organism Diagnosis', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C16612', label='Gene', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C26548', label='Gene Product', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C97325', label='Manufactured Object', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C3910', label='Molecular Abnormality', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C14250', label='Organism', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C20189', label='Property or Attribute', level=None, leaf=False, expanded=None, children=None), HierarchyNode(uri=None, ct=None, code='C28428', label='Retired Concept', level=None, leaf=False, expanded=None, children=None)]

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Find concepts by search term

Find concepts matching a search term within a specified terminology. This example uses paging to get only the first 5 results. Include is set to minimal.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search

2025-02-27T15:14:20.415 INFO : Get search results for terminology - ncit
2025-02-27T15:14:20.416 INFO :     search results = uri=None ct=None total=198932 time_taken=72 parameters=SearchCriteria(uri=None, ct=None, term=None, type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C1000', name='Recombinant Amphiregulin', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C100000', name='Percutaneous Coronary Intervention for ST Elevation Myocardial Infarction-Stable-Over 12 Hours From Symptom Onset', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C100003', name='Percutaneous Mitral Valve Repair', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', 
source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C100006', name='Pre-Operative Evaluation for Non-Cardiovascular Surgery', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C100009', name='Reused Cardiac Lead', 
terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (restrict by concept status)

Find concepts matching a search term within a specified terminology and restrict the search results by concept status of "Retired_Concept". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_filter_by_concept_status

2025-02-27T15:18:14.562 INFO : Get search results from ncit for term = respiratory, concept status = Retired_Concept
2025-02-27T15:18:14.562 INFO :     search results = uri=None ct=None total=19 time_taken=109 parameters=SearchCriteria(uri=None, ct=None, term='respiratory', type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=['Retired_Concept'], var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C83505', name='Respiratory Acidosis', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='Retired_Concept', source=None, leaf=True, active=False, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C23710', name='Murine Respiratory System', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='Retired_Concept', source=None, leaf=True, active=False, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C87173', name='Respiratory Rate Finding', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='Retired_Concept', source=None, leaf=True, active=False, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C27561', name='Respiratory Distress Syndrome', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='Retired_Concept', source=None, leaf=True, active=False, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, 
disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C4928', name='Acute Respiratory Distress Syndrome', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='Retired_Concept', source=None, leaf=True, active=False, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (restrict by definition source)

Get concepts matching a search term within a specified terminology and restrict the search results by a definition source of "NCI". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_filter_by_definition_source

2025-02-27T15:19:13.012 INFO : Get search results from ncit for term = dsDNA, definition source = NCI
2025-02-27T15:19:13.012 INFO :     search results = uri=None ct=None total=13 time_taken=40 parameters=SearchCriteria(uri=None, ct=None, term='dsDNA', type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=['NCI'], definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C449', name='DNA', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C25832', name='DNA Double Strand Break', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C14348', name='Double Stranded DNA Virus', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C114565', name='Anti-ds DNA Antibody', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, 
properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C211596', name='Anti-ds DNA Antibody Positive', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (restrict by definition type)

Find concepts matching a search term within a specified terminology and restrict the search results by a definition type of "DEFINITION". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_filter_by_definition_type

2025-02-27T15:22:38.889 INFO : Get search results from ncit for term = melanoma, definition type = DEFINITION
2025-02-27T15:22:38.890 INFO :     search results = uri=None ct=None total=1462 time_taken=38 parameters=SearchCriteria(uri=None, ct=None, term='melanoma', type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=['DEFINITION'], synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C103113', name='NCI 
CTEP SDC Melanoma Sub-Category Terminology', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C157920', name='Melanoma Surgery', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, 
mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C1830', name='Melanoma Theraccine', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C46091', name='Melanoma Biomarker', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (restrict by synonym source and termgroup)

Find concepts matching a search term within a specified terminology and restrict the search results by a synonym source of "NCI" and synonymTermGroup of "PT".

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_filter_by_synonym_source_and_term_type

2025-02-27T15:25:23.740 INFO : Get search results from ncit for term = dsDNA, synonym source = NCI, term group = PT
2025-02-27T15:25:23.741 INFO :     search results = uri=None ct=None total=14 time_taken=50 parameters=SearchCriteria(uri=None, ct=None, term='dsDNA', type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=['NCI'], synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=['PT'], subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C449', name='DNA', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C25832', name='DNA Double Strand Break', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C14348', name='Double Stranded DNA Virus', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C114565', name='Anti-ds DNA Antibody', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C211596', name='Anti-ds DNA Antibody Positive', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, 
active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (restrict by synonym type)

Find concepts matching a search term within a specified terminology and restrict the search results by a synonym type of "FULL_SYN".

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_filter_by_synonym_type

2025-02-27T15:27:02.763 INFO : Get search results from ncit for term = dsDNA, synonym type = FULL_SYN
2025-02-27T15:27:02.763 INFO :     search results = uri=None ct=None total=14 time_taken=33 parameters=SearchCriteria(uri=None, ct=None, term='dsDNA', type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=['FULL_SYN'], definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C449', name='DNA', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C25832', name='DNA Double Strand Break', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C14348', name='Double Stranded DNA Virus', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C114565', name='Anti-ds DNA Antibody', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C211596', name='Anti-ds DNA Antibody Positive', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (where search term is a code)

Find concepts matching a search term within a specified terminology and restrict the search results using a code as the search term.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_by_code

2025-02-27T15:27:35.347 INFO : Get search results from ncit for term = C3224
2025-02-27T15:27:35.347 INFO :     search results = uri=None ct=None total=1 time_taken=53 parameters=SearchCriteria(uri=None, ct=None, term='C3224', type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (using type match)

Find concepts matching a search term within a specified terminology and a search type of "match". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_by_type_match

2025-02-27T15:28:42.458 INFO : Get search results from ncit for term = enzyme, type = match
2025-02-27T15:28:42.458 INFO :     search results = uri=None ct=None total=1 time_taken=35 parameters=SearchCriteria(uri=None, ct=None, term='enzyme', type='match', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C16554', name='Enzyme', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (using type startsWith)

Find concepts matching a search term within a specified terminology and a search type of "startsWith".This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_by_type_starts_with

2025-02-27T15:28:52.093 INFO : Get search results from ncit for term = enzyme, type = startsWith
2025-02-27T15:28:52.093 INFO :     search results = uri=None ct=None total=49 time_taken=29 parameters=SearchCriteria(uri=None, ct=None, term='enzyme', type='startsWith', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C16554', name='Enzyme', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C147466', name='Enzyme-Linked Lectin Assay', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C156467', name='Enzyme Unit per Meter Squared', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C208420', name='Enzyme Unit per 10 Billion Cells', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C40500', name='Enzyme Uncoupling', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (using type phrase)

Find concepts matching a search term within a specified terminology and a search type of "phrase". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_by_type_phrase

2025-02-27T15:31:20.747 INFO : Get search results from ncit for term = enzyme, type = phrase
2025-02-27T15:31:20.747 INFO :     search results = uri=None ct=None total=273 time_taken=38 parameters=SearchCriteria(uri=None, ct=None, term='enzyme', type='phrase', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C16554', name='Enzyme', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C40500', name='Enzyme Uncoupling', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C41564', name='Enzyme Induction', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C17455', name='Enzyme Immunoassay', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C18296', name='Pancreatic Enzyme', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (using type fuzzy)

Find concepts matching a search term within a specified terminology and a search type of "fuzzy". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_by_type_fuzzy

2025-02-27T15:30:17.293 INFO : Get search results from ncit for term = enzyme, type = fuzzy
2025-02-27T15:30:17.294 INFO :     search results = uri=None ct=None total=2259 time_taken=43 parameters=SearchCriteria(uri=None, ct=None, term='enzyme', type='fuzzy', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C16554', name='Enzyme', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C41564', name='Enzyme Induction', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C40500', name='Enzyme Uncoupling', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C21281', name='Enzyme Gene', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C17455', name='Enzyme Immunoassay', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (using type AND)

Find concepts matching a search term within a specified terminology and a search type of "and". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_by_type_and

2025-02-27T15:31:31.357 INFO : Get search results from ncit for term = malignant melanoma, type = AND
2025-02-27T15:31:31.357 INFO :     search results = uri=None ct=None total=150 time_taken=36 parameters=SearchCriteria(uri=None, ct=None, term='malignant melanoma', type='AND', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C16835', name='Experimental Malignant Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C60451', name='Rat Malignant Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C194143', name='Malignant Melanoma of Lip', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C16317', name='B16 Malignant Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (using type OR)

Find concepts matching a search term within a specified terminology and a search type of "or". This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_by_type_or

2025-02-27T15:32:43.876 INFO : Get search results from ncit for term = malignant melanoma, type = OR
2025-02-27T15:32:43.877 INFO :     search results = uri=None ct=None total=5752 time_taken=67 parameters=SearchCriteria(uri=None, ct=None, term='malignant melanoma', type='OR', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C16835', name='Experimental Malignant Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C60451', name='Rat Malignant Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C194143', name='Malignant Melanoma of Lip', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C16317', name='B16 Malignant Melanoma', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by search term (with highlights)

Find concepts matching a search term within a specified terminology and include synonyms and highlighted text in the response. This example uses paging to get only the first 5 results.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_with_highlights

2025-02-27T15:32:51.668 INFO : Get search results from ncit for term = XAV05295I5, type = <class 'type'>
2025-02-27T15:32:51.668 INFO :     search results = uri=None ct=None total=1 time_taken=32 parameters=SearchCriteria(uri=None, ct=None, term='XAV05295I5', type='contains', include='highlights', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C61305', name='Sivifene', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by property

Find concepts matching a search term that is searched within a certain set of properties. The search results are set to include the property values, so you can easily see the match. The property setting here can be either based on code or on label

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_concepts_by_property

2025-02-27T15:34:17.540 INFO : Get search results from ncit for term = XAV05295I5, property = FDA_UNII_Code
2025-02-27T15:34:17.540 INFO :     search results = uri=None ct=None total=1 time_taken=32 parameters=SearchCriteria(uri=None, ct=None, term='XAV05295I5', type='contains', include='highlights', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=['FDA_UNII_Code'], value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C61305', name='Sivifene', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by subset

Get concepts matching a search term within a specified terminology and subset. This example searches within C165258 (e.g. Cellosaurus Disease Terminology).

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_search_concepts_by_subset

2025-02-27T15:34:27.898 INFO : Get search results from ncit for term = immune, subset = C165258
2025-02-27T15:34:27.899 INFO :     search results = uri=None ct=None total=35 time_taken=45 parameters=SearchCriteria(uri=None, ct=None, term='immune', type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=5, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=['C165258'], code_list=None, terminology=['ncit'], sparql=None) concepts=[Concept(uri=None, ct=None, code='C3507', name='Immune System Disorder', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3446', name='Primary Immune Thrombocytopenia', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C152105', name='Inborn Error of Immunity', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C2986', name='Type 1 Diabetes Mellitus', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C3962', name='Adenosine Deaminase Deficiency', terminology='ncit', version='25.02d', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Find concepts by SPARQL code

Find concepts for a specified SPARQL query that returns a ?code field.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_find_concepts_by_sparql_code

2024-07-12T12:35:44.440 INFO : Get search results from ncit for SPARQL query = SELECT ?code { GRAPH <http://NCI_T_monthly> { ?x a owl:Class . ?x :NHC0 ?code . ?x :P108 "Melanoma" } }
2024-07-12T12:35:44.440 INFO :     search results = uri=None ct=None total=1 time_taken=24 parameters=SearchCriteria(uri=None, ct=None, term=None, type='contains', include='minimal', sort=None, ascending=True, from_record=0, page_size=25, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=['C3224'], terminology=['ncit'], sparql='SELECT ?code { GRAPH <http://NCI_T_monthly> { ?x a owl:Class . ?x :NHC0 ?code . ?x :P108 "Melanoma" } }') concepts=[Concept(uri=None, ct=None, code='C3224', name='Melanoma', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Get all subsets

Get all subsets for a specified terminology.

pytest tests/test_metadata_endpoints_api.py::TestMetadataEndpointsApi::test_get_subsets1

2024-07-03T16:49:18.906 INFO : Get all subsets for terminology - ncit
2024-07-03T16:49:18.918 INFO :     subsets - [Concept(uri=None, ct=None, code='C167405', name='ACC/AHA EHR Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=[Concept(uri=None, ct=None, code='C167409', name='ACC/AHA Pediatric and Congenital Cardiology EHR Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=None, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)], parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C157225', name='CBDD Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=[Concept(uri=None, ct=None, code='C168696', name='CBDD Process Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=None, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C168697', name='CBDD Structure Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=None, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)], parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C165258', name='Cellosaurus Disease Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C177281', name='Childhood Cancer Predisposition Study Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, history=None, properties=None, children=[Concept(uri=None, ct=None, code='C177516', name='CCPS Disease Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=None, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C177517', name='CCPS Genetics Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=None, active=True, synonyms=None, definitions=None, history=None, properties=None, children=None, parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None)], parents=None, descendants=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C61410', name='Clinical Data Interchange Standards Consortium Terminology', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None,...

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Get subset by code

Get subset for a specified terminology and code.

pytest tests/test_subset_endpoints_api.py::TestSubsetEndpointsApi::test_get_subset

2024-07-12T12:53:47.395 INFO : Get the subset for code - C116978
2024-07-12T12:53:47.395 INFO :     subsets: uri=None ct=None code='C116978' name='CTRP Agent Terminology' terminology='ncit' version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status='DEFAULT' source=None leaf=True active=True synonyms=[Synonym(uri=None, ct=None, name='Clinical Trials Reporting Program Agent Terminology', highlight=None, term_type='SY', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='CTRP Agent Terminology', highlight=None, term_type='PT', type='FULL_SYN', source='NCI', code=None, sub_source=None, qualifiers=None, active=None), Synonym(uri=None, ct=None, name='CTRP Agent Terminology', highlight=None, term_type=None, type='Preferred_Name', source=None, code=None, sub_source=None, qualifiers=None, active=None)] definitions=[Definition(uri=None, ct=None, definition='A subset of terminology about pharmacologic substances and formulations that are currently being used or tested in clinical trials for the treatment of cancer, cancer-related conditions and chemo/radiotherapy-related side effects.', highlight=None, type='DEFINITION', source='NCI', qualifiers=None)] properties=[ModelProperty(uri=None, ct=None, type='Contributing_Source', value='CTRP', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Publish_Value_Set', value='Yes', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Semantic_Type', value='Intellectual Product', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='Term_Browser_Value_Set_Description', value='A subset of terminology about pharmacologic substances and formulations that are currently being used or tested in clinical trials for the treatment of cancer, cancer-related conditions and chemo/radiotherapy-related side effects. This data is available for viewing and download at the <a href="https://evs.nci.nih.gov/ftp1/CTRP/NCIt-CTRP_Subsets.xls">NCI FTP</a> site.', highlight=None, qualifiers=None, source=None), ModelProperty(uri=None, ct=None, type='UMLS_CUI', value='C3899744', highlight=None, qualifiers=None, source=None)] children=None parents=None descendants=None qualifiers=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None history=None maps=None paths=None

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Get subset members by code

Get subset members for a specified terminology and code.

pytest tests/test_subset_endpoints_api.py::TestSubsetEndpointsApi::test_get_subset_members

2024-07-12T12:52:28.745 INFO : Get the subset members for code - C157225
2024-07-12T12:52:28.746 INFO :     subsets: [Concept(uri=None, ct=None, code='C16255', name='Acetylation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C157214', name='Acylation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C157206', name='Adsorption', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C157210', name='Amidation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C157220', name='Antigen Cultivation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C61471', name='Attenuation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C41544', name='Catabolic Process', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C157211', name='Cell Expansion', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C40483', name='Chelating Activity', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=False, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C164238', name='Chemical Attenuation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='C175901', name='Chemical Inactivation', terminology='ncit', version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status='DEFAULT', source=None, leaf=True, active=True, synonyms=None, definitions=None,...

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Get all mapsets

Get all mapsets. Include parameter allows customizing how much data to return.

pytest tests/test_mapset_endpoints_api.py::TestMapsetEndpointsApi::test_get_mapsets

2024-07-12T12:50:27.715 INFO : Get all mapsets
2024-07-12T12:50:27.717 INFO :    mapsets = [Concept(uri=None, ct=None, code='SNOMEDCT_US_2020_09_01_to_ICD10CM_2021_Mappings', name='SNOMEDCT_US_2020_09_01 to ICD10CM_2021 Mappings', terminology='snomedct_us', version='2020_09_01', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='SNOMEDCT_US_2020_09_01_to_ICD10_2016_Mappings', name='SNOMEDCT_US_2020_09_01 to ICD10_2016 Mappings', terminology='snomedct_us', version='2020_09_01', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_Maps_To_ICD10CM', name='NCIt_Maps_To_ICD10CM', terminology=None, version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_Maps_To_MedDRA', name='NCIt_Maps_To_MedDRA', terminology=None, version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_Maps_To_GDC', name='NCIt_Maps_To_GDC', terminology=None, version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_Maps_To_ICD9CM', name='NCIt_Maps_To_ICD9CM', terminology=None, version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_Maps_To_ICDO3', name='NCIt_Maps_To_ICDO3', terminology=None, version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_Maps_To_ICD10', name='NCIt_Maps_To_ICD10', terminology=None, version='21.06e', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=True, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='PDQ_2016_07_31_TO_NCI_2016_10E', name='PDQ_2016_07_31_TO_NCI_2016_10E', terminology=None, version='201607', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_to_HGNC_Mapping', name='NCIt_to_HGNC_Mapping', terminology=None, version='June2024', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIt_to_ChEBI_Mapping', name='NCIt_to_ChEBI_Mapping', terminology=None, version='August2023', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='MA_to_NCIt_Mapping', name='MA_to_NCIt_Mapping', terminology=None, version='November2011', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='GO_to_NCIt_Mapping', name='GO_to_NCIt_Mapping', terminology=None, version='February2020', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='ICD10_to_MedDRA_Mapping', name='ICD10_to_MedDRA_Mapping', terminology=None, version='July2023', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='NCIT_TO_SWISSPROT', name='NCIT_TO_SWISSPROT', terminology=None, version='June2024', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='ICDO_TO_NCI_TOPOGRAPHY', name='ICDO_TO_NCI_TOPOGRAPHY', terminology=None, version='2017-12-21', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='ICDO_TO_NCI_MORPHOLOGY', name='ICDO_TO_NCI_MORPHOLOGY', terminology=None, version='2017-12-21', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None), Concept(uri=None, ct=None, code='ICDO_TO_NCI_AXIS', name='ICDO_TO_NCI_AXIS', terminology=None, version='2017-12-21', level=None, highlight=None, subset_link=None, mapset_link=None, concept_status=None, source=None, leaf=None, active=None, synonyms=None, definitions=None, properties=None, children=None, parents=None, descendants=None, qualifiers=None, associations=None, inverse_associations=None, roles=None, disjoint_with=None, inverse_roles=None, history=None, maps=None, paths=None)]

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Get mapset by code

Get mapset information for a specified code. Include parameter allows customizing how much data to return.

pytest tests/test_mapset_endpoints_api.py::TestMapsetEndpointsApi::test_get_mapset_by_code

2024-07-12T12:49:54.187 INFO : Get mapsets for code - NCIt_Maps_To_ICDO3 
2024-07-12T12:49:54.187 INFO :    mapset = uri=None ct=None code='NCIt_Maps_To_ICDO3' name='NCIt_Maps_To_ICDO3' terminology=None version='21.06e' level=None highlight=None subset_link=None mapset_link=None concept_status=None source=None leaf=None active=True synonyms=None definitions=None properties=None children=None parents=None descendants=None qualifiers=None associations=None inverse_associations=None roles=None disjoint_with=None inverse_roles=None history=None maps=None paths=None

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Get maps by mapset code

Get the maps for a specified mapset code.

pytest tests/test_mapset_endpoints_api.py::TestMapsetEndpointsApi::test_get_mapset_mappings_by_code

2024-07-12T12:49:21.257 INFO : Get mapset mappings for code - GO_to_NCIt_Mapping 
2024-07-12T12:49:21.257 INFO :    mappings = uri=None ct=None total=305 time_taken=None parameters=SearchCriteria(uri=None, ct=None, term=None, type=None, include=None, sort=None, ascending=None, from_record=0, page_size=25, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=None, sparql=None) maps=[ConceptMap(uri=None, ct=None, source='GO', source_name='ATP hydrolysis activity', source_term_type=None, source_code='GO:0016887', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='ATP Hydrolysis', target_term_type=None, target_code='C19939', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='B cell activation', source_term_type=None, source_code='GO:0042113', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='B-Cell Activation', target_term_type=None, target_code='C19255', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='B cell proliferation', source_term_type=None, source_code='GO:0042100', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='B Cell Proliferation', target_term_type=None, target_code='C19385', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA alkylation', source_term_type=None, source_code='GO:0006305', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Alkylation', target_term_type=None, target_code='C25826', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA binding', source_term_type=None, source_code='GO:0003677', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Binding', target_term_type=None, target_code='C18597', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA integration', source_term_type=None, source_code='GO:0015074', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Integration', target_term_type=None, target_code='C18855', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA methylation', source_term_type=None, source_code='GO:0006306', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Methylation', target_term_type=None, target_code='C17961', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA modification', source_term_type=None, source_code='GO:0006304', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Modification Process', target_term_type=None, target_code='C19449', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA recombination', source_term_type=None, source_code='GO:0006310', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Recombination Process', target_term_type=None, target_code='C17082', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA repair', source_term_type=None, source_code='GO:0006281', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Repair', target_term_type=None, target_code='C16513', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA replication initiation', source_term_type=None, source_code='GO:0006270', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='Replication Initiation', target_term_type=None, target_code='C28677', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA replication proofreading', source_term_type=None, source_code='GO:0045004', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Replication Proofreading', target_term_type=None, target_code='C21048', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA replication', source_term_type=None, source_code='GO:0006260', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='DNA Replication', target_term_type=None, target_code='C16514', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA-templated transcription elongation', source_term_type=None, source_code='GO:0006354', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='Transcription Elongation', target_term_type=None, target_code='C28586', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA-templated transcription initiation', source_term_type=None, source_code='GO:0006352', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='Transcription Initiation', target_term_type=None, target_code='C20147', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA-templated transcription termination', source_term_type=None, source_code='GO:0006353', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='Transcription Termination', target_term_type=None, target_code='C28615', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='DNA-templated transcription', source_term_type=None, source_code='GO:0006351', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='Transcription', target_term_type=None, target_code='C17208', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='G1 phase', source_term_type=None, source_code='GO:0051318', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='G1 Phase Process', target_term_type=None, target_code='C17355', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='G2 phase', source_term_type=None, source_code='GO:0051319', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='G2 Phase Process', target_term_type=None, target_code='C17356', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='GTP binding', source_term_type=None, source_code='GO:0005525', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='GTP Binding', target_term_type=None, target_code='C20979', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='M phase', source_term_type=None, source_code='GO:0000279', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='M Phase Process', target_term_type=None, target_code='C20349', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='RNA binding', source_term_type=None, source_code='GO:0003723', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='RNA Binding', target_term_type=None, target_code='C20737', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='RNA biosynthetic process', source_term_type=None, source_code='GO:0032774', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='RNA Synthesis', target_term_type=None, target_code='C19018', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='RNA catabolic process', source_term_type=None, source_code='GO:0006401', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='RNA Degradation', target_term_type=None, target_code='C19144', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None), ConceptMap(uri=None, ct=None, source='GO', source_name='RNA folding', source_term_type=None, source_code='GO:0034337', source_terminology=None, source_terminology_version=None, source_loaded=None, type='mapsTo', rank='1', group=None, rule=None, target_name='RNA Folding', target_term_type=None, target_code='C19017', target_terminology='NCI_Thesaurus', target_terminology_version='23.02d', target_loaded=None, target_term_group=None)]

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Get replacement concepts for an inactive concept code

Get the replacement concepts for a specified inactive concept code.

pytest tests/test_history_endpoints_api.py::TestHistoryEndpointsApi::test_get_replacements

2024-07-12T12:48:58.044 INFO : Get suggested replacements for code - C12658
2024-07-12T12:48:58.044 INFO :     replacements = [History(uri=None, ct=None, code='C12658', name='Prokaryotic Cell', action='retire', var_date='2003-08-22', replacement_code='C19157', replacement_name='Specimen')]

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Get replacement concepts for a list of inactive concept codes

Get the replacement concepts for a specified list of inactive concept codes.

pytest tests/test_history_endpoints_api.py::TestHistoryEndpointsApi::test_get_replacements_from_list

2024-07-12T12:48:34.574 INFO : Get suggested replacements for code - C & 1
2024-07-12T12:48:34.575 INFO :     suggested replacements = [History(uri=None, ct=None, code='C12658', name='Prokaryotic Cell', action='retire', var_date='2003-08-22', replacement_code='C19157', replacement_name='Specimen'), History(uri=None, ct=None, code='C13320', name='Nose, Nasal Passages', action='merge', var_date='2003-08-22', replacement_code='C12756', replacement_name='Nose')]

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Get SPARQL bindings from query

Get SPARQL bindings for a specified SPARQL query.

pytest tests/test_search_endpoint_api.py::TestSearchEndpointApi::test_get_sparql_bindings

2024-07-12T12:39:16.468 INFO : Get SPARQL bindings for query = SELECT ?code { GRAPH <http://NCI_T_monthly> { ?x a owl:Class . ?x :NHC0 ?code . } }
2024-07-12T12:39:16.469 INFO :     search results = uri=None ct=None total=166616 time_taken=None parameters=SearchCriteria(uri=None, ct=None, term=None, type='contains', include='minimal', sort=None, ascending=None, from_record=None, page_size=None, concept_status=None, var_property=None, value=None, synonym_source=None, synonym_type=None, definition_source=None, definition_type=None, synonym_term_type=None, subset=None, code_list=None, terminology=None, sparql='SELECT ?code { GRAPH <http://NCI_T_monthly> { ?x a owl:Class . ?x :NHC0 ?code . } }') results=[{'code': 'C7057'}, {'code': 'C12219'}, {'code': 'C12913'}, {'code': 'C3910'}, {'code': 'C20189'}, {'code': 'C1908'}, {'code': 'C26548'}, {'code': 'C12218'}, {'code': 'C17828'}, {'code': 'C16612'}]