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DESCRIPTION
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Package: flowGate
Type: Package
Title: Interactive Cytometry Gating in R
Version: 0.99.2
Authors@R: c(person("Andrew",
"Wight",
email = "andrew.wight10@gmail.com",
role = c("aut", "cre")),
person("Harvey",
"Cantor",
email = "Harvey_Cantor@dfci.harvard.edu",
role = c("aut", "ldr")))
Description: flowGate adds an interactive Shiny app to allow manual
GUI-based gating of flow cytometry data in R. Using flowGate,
you can draw 1D and 2D span/rectangle gates, quadrant gates,
and polygon gates on flow cytometry data by interactively drawing
the gates on a plot of your data, rather than by specifying gate
coordinates. This package is especially geared toward wet-lab
cytometerists looking to take advantage of R for cytometry
analysis, without necessarily having a lot of R experience.
License: MIT + file LICENSE
Encoding: UTF-8
LazyData: false
Imports:
shiny (>= 1.5.0),
BiocManager (>= 1.30.10),
flowCore (>= 2.0.1),
dplyr (>= 1.0.0),
ggplot2 (>= 3.3.2),
rlang (>= 0.4.7),
purrr,
tibble,
methods
Depends:
flowWorkspace (>= 4.0.6),
ggcyto (>= 1.16.0),
R (>= 4.2)
RoxygenNote: 7.2.3
Suggests:
knitr,
rmarkdown,
stringr,
tidyverse,
testthat
VignetteBuilder: knitr
biocViews:
Software,
WorkflowStep,
FlowCytometry,
Preprocessing,
ImmunoOncology,
DataImport