From 21d4285975602057c8c33a6d212f815bdcc6b1fc Mon Sep 17 00:00:00 2001 From: Diller Date: Thu, 15 Jan 2026 13:54:23 -0500 Subject: [PATCH] Fixes issue #180, issue #181, issue #183, issue #186, and issue #189: Creates classes 'healthcare outcome report' and 'patient-reported outcome', adds definition to 'hospitalization', modifies definition of 'health care process', and removes Google Code links. --- .gitignore | 4 +++ src/ontology/ogms-edit.owl | 69 ++++++++++++++++++-------------------- 2 files changed, 36 insertions(+), 37 deletions(-) diff --git a/.gitignore b/.gitignore index 6ae96be..3fb4a86 100644 --- a/.gitignore +++ b/.gitignore @@ -4,6 +4,7 @@ .DS_Store semantic.cache bin/ +catalog-v001.xml *.tmp *.tmp.obo @@ -78,6 +79,9 @@ src/ontology/omrse-full.* src/ontology/omrse-simple.* src/ontology/omrse-simple-non-classified.* +archive/ +ogms_seed.owl + src/ontology/merged-omrse-edit.owl src/ontology/reports src/ontology/omrse-edit.properties diff --git a/src/ontology/ogms-edit.owl b/src/ontology/ogms-edit.owl index 94ee7a5..4c88ef8 100644 --- a/src/ontology/ogms-edit.owl +++ b/src/ontology/ogms-edit.owl @@ -177,6 +177,8 @@ Declaration(Class(obo:OGMS_0000145)) Declaration(Class(obo:OGMS_0000146)) Declaration(Class(obo:OGMS_0000147)) Declaration(Class(obo:OGMS_0000148)) +Declaration(Class(obo:OGMS_0000149)) +Declaration(Class(obo:OGMS_0000150)) Declaration(AnnotationProperty(obo:IAO_0000115)) Declaration(AnnotationProperty(obo:IAO_0000116)) Declaration(AnnotationProperty(obo:IAO_0000117)) @@ -222,13 +224,13 @@ AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000016 "creation date: 2010-07-19T AnnotationAssertion(rdfs:label obo:OGMS_0000016 "clinical picture") SubClassOf(obo:OGMS_0000016 obo:OGMS_0000123) -# Class: obo:OGMS_0000017 (image finding) +# Class: obo:OGMS_0000017 (clinical finding from image) -AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000017 "A representation of an image that supports an inference to an assertion about some quality of a patient."@en) +AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000017 "An interpretation of an image that is the output of a clinical evaluation and supports an inference to an assertion about some quality of a patient."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000017 "Albert Goldfain") AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000017 "http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000017 "creation date: 2009-06-23T10:21:10Z") -AnnotationAssertion(rdfs:label obo:OGMS_0000017 "image finding") +AnnotationAssertion(rdfs:label obo:OGMS_0000017 "clinical finding from image"@en) SubClassOf(obo:OGMS_0000017 obo:OGMS_0000014) # Class: obo:OGMS_0000018 (laboratory finding) @@ -380,13 +382,13 @@ AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000035 "creation date: 2009-06-23T AnnotationAssertion(rdfs:label obo:OGMS_0000035 "constitutional genetic disease") SubClassOf(obo:OGMS_0000035 obo:OGMS_0000031) -# Class: obo:OGMS_0000037 (abnormal homeostasis) +# Class: obo:OGMS_0000037 (altered homeostasis) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000037 "Homeostasis that is clinically abnormal for an organism of a given type and age in a given environment."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000037 "Albert Goldfain") AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000037 "http://ontology.buffalo.edu/medo/Disease_and_Diagnosis.pdf") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000037 "creation date: 2009-06-23T11:26:44Z") -AnnotationAssertion(rdfs:label obo:OGMS_0000037 "abnormal homeostasis") +AnnotationAssertion(rdfs:label obo:OGMS_0000037 "altered homeostasis") SubClassOf(obo:OGMS_0000037 obo:OGMS_0000032) # Class: obo:OGMS_0000038 (normal homeostasis) @@ -658,7 +660,6 @@ SubClassOf(obo:OGMS_0000082 obo:OGMS_0000061) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000083 "TODO: Define."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000083 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000083 "http://code.google.com/p/ogms/issues/detail?id=26") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000083 "creation date: 2009-11-24T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000083 "physical examination finding") SubClassOf(obo:OGMS_0000083 obo:OGMS_0000014) @@ -667,7 +668,6 @@ SubClassOf(obo:OGMS_0000083 obo:OGMS_0000014) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000084 "An aggregate of organisms of the same type."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000084 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000084 "http://code.google.com/p/ogms/issues/detail?id=33") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000084 "creation date: 2009-11-24T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000084 "organism population") SubClassOf(obo:OGMS_0000084 obo:BFO_0000040) @@ -676,7 +676,7 @@ SubClassOf(obo:OGMS_0000084 obo:BFO_0000040) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000085 "A bodily process in an organism S involving two integrated levels: (a) activation of the nociceptive system and associated emotion generating brain components of S, and (b) a simultaneous aversive sensory and emotional experience on the part of S, where (b) is phenomenologically similar to the sort of aversive experience involved in pain with concordant tissue damage."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000085 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000085 "http://www.referent-tracking.com/RTU/sendfile/?file=painTokyo1_27_2011.pdf") +AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000085 "https://philarchive.org/rec/SMITAO-12") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000085 "creation date: 2009-11-24T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000085 "pain") SubClassOf(obo:OGMS_0000085 obo:OGMS_0000020) @@ -685,7 +685,6 @@ SubClassOf(obo:OGMS_0000085 obo:OGMS_0000020) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000086 "A pattern of signs and symptoms that typically co-occur."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000086 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000086 "http://code.google.com/p/ogms/issues/detail?id=32") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000086 "creation date: 2009-11-24T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000086 "syndrome") SubClassOf(obo:OGMS_0000086 obo:BFO_0000019) @@ -694,7 +693,6 @@ SubClassOf(obo:OGMS_0000086 obo:BFO_0000019) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000087 "An object aggregate consisting of an organism and all material entities located within the organism, overlapping the organism, or occupying sites formed in part by the organism."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000087 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000087 "http://code.google.com/p/ogms/issues/detail?id=3") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000087 "creation date: 2010-01-25T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000087 "extended organism") SubClassOf(obo:OGMS_0000087 obo:BFO_0000040) @@ -703,7 +701,6 @@ SubClassOf(obo:OGMS_0000087 obo:BFO_0000040) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000088 "A communication from a patient about something they perceive as being abnormal about their body or life."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000088 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000088 "http://code.google.com/p/ogms/issues/detail?id=12") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000088 "creation date: 2010-01-25T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000088 "patient symptom report") SubClassOf(obo:OGMS_0000088 obo:IAO_0000030) @@ -713,7 +710,6 @@ SubClassOf(obo:OGMS_0000088 obo:IAO_0000030) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000089 "A structurally anomalous part of an organism acquired during fetal development and present at birth (but not necessarily hereditary) which is hypothesized to be harmful for the organism."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000089 "Albert Goldfain") AnnotationAssertion(obo:IAO_0000118 obo:OGMS_0000089 "congenital malformation") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000089 "http://code.google.com/p/ogms/issues/detail?id=28") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000089 "creation date: 2010-03-31T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000089 "congenital disorder") SubClassOf(obo:OGMS_0000089 obo:BFO_0000040) @@ -722,7 +718,6 @@ SubClassOf(obo:OGMS_0000089 obo:BFO_0000040) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000090 "A planned process whose completion is hypothesized by a health care provider to eliminate, prevent, or alleviate a disorder, the signs and symptoms of a disorder, or a pathological process"@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000090 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000090 "http://code.google.com/p/ogms/issues/detail?id=35") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000090 "creation date: 2010-03-31T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000090 "treatment") SubClassOf(obo:OGMS_0000090 obo:OGMS_0000096) @@ -731,7 +726,6 @@ SubClassOf(obo:OGMS_0000090 obo:OGMS_0000096) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000091 "A processual entity during which a patient participating in a disease course gradually returns to participating in a canonical life course."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000091 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000091 "http://code.google.com/p/ogms/issues/detail?id=35") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000091 "creation date: 2010-03-31T04:51:11Z") AnnotationAssertion(rdfs:label obo:OGMS_0000091 "convalescence") SubClassOf(obo:OGMS_0000091 obo:BFO_0000015) @@ -742,7 +736,6 @@ AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000092 "A process which has as par AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000092 "Albert Goldfain Richard Scheuermann Sagar Jain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000092 "http://code.google.com/p/ogms/issues/detail?id=38") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000092 "creation date: 2010-03-31T04:51:11Z EDIT: 10 NOV 2015") @@ -753,7 +746,6 @@ SubClassOf(obo:OGMS_0000092 obo:BFO_0000015) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000093 "A hypothesis about some future part of a disease course."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000093 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000093 "http://code.google.com/p/ogms/issues/detail?id=35") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000093 "creation date: 2010-03-31T12:42:23Z") AnnotationAssertion(rdfs:label obo:OGMS_0000093 "prognosis") SubClassOf(obo:OGMS_0000093 obo:IAO_0000027) @@ -762,7 +754,6 @@ SubClassOf(obo:OGMS_0000093 obo:IAO_0000027) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000094 "A disease course with an acute onset"@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000094 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000094 "http://code.google.com/p/ogms/wiki/Meeting_notes_20100513") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000094 "creation date: 2010-07-19T11:57:44Z 10212020 @@ -779,7 +770,6 @@ AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000095 "A bodily process caused by AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000095 "Albert Goldfain Richard Scheuermann Sagar Jain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000095 "http://code.google.com/p/ogms/wiki/Meeting_notes_20100513") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000095 "creation date: 2010-07-19T11:57:44Z Updated: 10 NOV 2015") @@ -788,10 +778,9 @@ SubClassOf(obo:OGMS_0000095 obo:OGMS_0000060) # Class: obo:OGMS_0000096 (health care process) -AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000096 "A planned process with the objective to improve the health status of a patient that directly involves the treatment, diagnosis, or prevention of disease or injury of a patient"@en) +AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000096 "A planned process with the objective to improve or maintain the health status of a patient that directly involves the treatment, diagnosis, or prevention of disease or injury of a patient"@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000096 "Albert Goldfain Sagar Jain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000096 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000096 "creation date: 2011-02-21T09:57:44Z editor date: 2017-04-18") AnnotationAssertion(rdfs:label obo:OGMS_0000096 "health care process") @@ -801,20 +790,15 @@ SubClassOf(obo:OGMS_0000096 obo:OBI_0000011) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000097 "A temporally-connected health care process that has as participants an organization or person realizing the health care provider role and a person realizing the patient role. The health care provider role and patient are realized during the health care encounter"@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000097 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000097 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000097 "creation date: 2011-02-21T09:57:44Z") AnnotationAssertion(rdfs:label obo:OGMS_0000097 "health care encounter") SubClassOf(obo:OGMS_0000097 obo:OGMS_0000096) # Class: obo:OGMS_0000098 (hospitalization) -AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000098 "TODO"@en) +AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000098 "A health care process in which a person is admitted to a hospital for treatment, diagnosis, or monitoring."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000098 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000098 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000098 "creation date: 2011-02-21T09:57:44Z") -AnnotationAssertion(rdfs:comment obo:OGMS_0000098 "09/16/2020 -Is this same as admission? -Is this the same as inpatient encounter?") AnnotationAssertion(rdfs:label obo:OGMS_0000098 "hospitalization") SubClassOf(obo:OGMS_0000098 obo:OGMS_0000096) @@ -822,7 +806,6 @@ SubClassOf(obo:OGMS_0000098 obo:OGMS_0000096) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000099 "TODO"@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000099 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000099 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000099 "creation date: 2011-02-21T09:57:44Z") AnnotationAssertion(rdfs:label obo:OGMS_0000099 "outpatient encounter") SubClassOf(obo:OGMS_0000099 obo:OGMS_0000097) @@ -831,7 +814,6 @@ SubClassOf(obo:OGMS_0000099 obo:OGMS_0000097) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000100 "A health care encounter involving a patient who has been admitted to a health care facility and remains in a hospital facility for at least one night."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000100 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000100 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000100 "creation date: 2011-02-21T09:57:44Z") AnnotationAssertion(rdfs:label obo:OGMS_0000100 "inpatient encounter") SubClassOf(obo:OGMS_0000100 obo:OGMS_0000097) @@ -840,7 +822,6 @@ SubClassOf(obo:OGMS_0000100 obo:OGMS_0000097) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000101 "A health care encounter in which care is provided for undifferentiated and unscheduled patients with illnesses or injuries requiring immediate medical attention."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000101 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000101 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/a2dbc2ed1dff99d6") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000101 "creation date: 2011-02-21T09:57:44Z") AnnotationAssertion(rdfs:label obo:OGMS_0000101 "emergency department encounter") SubClassOf(obo:OGMS_0000101 obo:OGMS_0000097) @@ -853,10 +834,6 @@ AnnotationAssertion(obo:IAO_0000116 obo:OGMS_0000102 "At the scale of organism ( Note: Adopted subtype of disorder, and injury can occur at the scale of organism down to cellular level.") AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000102 "Albert Goldfain Sagar Jain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000102 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/ca0ad373f27774c5 - -OGMS call adoption- 16 SEPT 2015 -https://docs.google.com/document/d/1iiV1-fTS7BUUSzDw3N_Afx42698YWf54-FOTY2NkAxo/edit") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000102 "creation date: 2011-09-20T09:57:44Z edited date: 30 SEPT 2015") AnnotationAssertion(rdfs:label obo:OGMS_0000102 "injury") @@ -867,7 +844,6 @@ SubClassOf(obo:OGMS_0000102 obo:OGMS_0000045) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000103 "A planned process whose completion is hypothesized by a health care provider to reduce the risk of developing a disorder or the signs and symptoms of a disorder."@en) AnnotationAssertion(obo:IAO_0000116 obo:OGMS_0000103 "Whether or not 'prophylaxis' and 'treatment' classes are disjoint is an open question.") AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000103 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000103 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/e42bde79218ee34e") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000103 "creation date: 2011-09-20T09:57:44Z") AnnotationAssertion(rdfs:label obo:OGMS_0000103 "disease prophylaxis") SubClassOf(obo:OGMS_0000103 obo:OBI_0000011) @@ -876,7 +852,6 @@ SubClassOf(obo:OGMS_0000103 obo:OBI_0000011) AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000104 "A health care process that involves the interpretation of a clinical picture from a given patient (input) and the assertion to the effect that the patient has a disease, disorder, or syndrome of a certain type, or none of these (output)."@en) AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000104 "Albert Goldfain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000104 "http://groups.google.com/group/ogms-discuss/browse_thread/thread/2a7008f311fac766/e7de486c94dfd82e") AnnotationAssertion(obo:IAO_0000232 obo:OGMS_0000104 "creation date: 2011-09-20T09:57:44Z") AnnotationAssertion(rdfs:label obo:OGMS_0000104 "diagnostic process") SubClassOf(obo:OGMS_0000104 obo:OGMS_0000096) @@ -889,7 +864,6 @@ AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000105 "Albert Goldfain Richard Scheuermann Sagar Jain") AnnotationAssertion(obo:IAO_0000118 obo:OGMS_0000105 "recurrent") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000105 "http://code.google.com/p/ogms/issues/detail?id=73") AnnotationAssertion(dc:date obo:OGMS_0000105 "10 NOV 2015") AnnotationAssertion(rdfs:label obo:OGMS_0000105 "relapse"@en) SubClassOf(obo:OGMS_0000105 obo:OBI_0000278) @@ -901,7 +875,6 @@ AnnotationAssertion(obo:IAO_0000116 obo:OGMS_0000106 "A part of a disease course AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000106 "Albert Goldfain Richard Scheuermann Sagar Jain") -AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000106 "http://code.google.com/p/ogms/issues/detail?id=73") AnnotationAssertion(dc:date obo:OGMS_0000106 "10 NOV 2015") AnnotationAssertion(rdfs:label obo:OGMS_0000106 "remission"@en) SubClassOf(obo:OGMS_0000106 obo:OBI_0000278) @@ -1180,5 +1153,27 @@ AnnotationAssertion(obo:IAO_0000116 obo:OGMS_0000148 "Originally OBIB_0000026") AnnotationAssertion(rdfs:label obo:OGMS_0000148 "medication role") SubClassOf(obo:OGMS_0000148 obo:BFO_0000023) +# Class: obo:OGMS_0000149 (patient-reported outcome) + +AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000149 "A data item that is about a patient’s health that comes directly from the patient. A patient reported outcome can include subjective feelings regarding symptoms, functions in daily life, physical, mental, emotional, spiritual, and social well-being, and satisfaction with healthcare that has been received."@en) +AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000149 "https://orcid.org/0000-0001-6378-1703") +AnnotationAssertion(obo:IAO_0000119 obo:OGMS_0000149 "https://www.cancer.gov/publications/dictionaries/cancer-terms/def/patient-reported-outcome") +AnnotationAssertion(dc:contributor obo:OGMS_0000149 "https://orcid.org/0000-0001-9625-1899") +AnnotationAssertion(dc:contributor obo:OGMS_0000149 "https://orcid.org/0000-0001-9990-8331") +AnnotationAssertion(dc:contributor obo:OGMS_0000149 "https://orcid.org/0009-0003-7246-1252") +AnnotationAssertion(oboInOwl:hasBroadSynonym obo:OGMS_0000149 "PRO"@en) +AnnotationAssertion(rdfs:comment obo:OGMS_0000149 "The outcome does not necessarily need to be related to a healthcare intervention. For example, it can be about a patient's overall quality of life related to a disease."@en) +AnnotationAssertion(rdfs:label obo:OGMS_0000149 "patient-reported outcome"@en) +SubClassOf(obo:OGMS_0000149 obo:IAO_0000027) + +# Class: obo:OGMS_0000150 (healthcare outcome report) + +AnnotationAssertion(obo:IAO_0000115 obo:OGMS_0000150 "A data item about a persont's health status or condition resulting from healthcare interventions, treatments, or services."@en) +AnnotationAssertion(obo:IAO_0000117 obo:OGMS_0000150 "https://orcid.org/0000-0001-6378-1703") +AnnotationAssertion(dc:contributor obo:OGMS_0000150 "https://orcid.org/0000-0001-9990-8331") +AnnotationAssertion(dc:contributor obo:OGMS_0000150 "https://orcid.org/0009-0003-7246-1252") +AnnotationAssertion(rdfs:label obo:OGMS_0000150 "healthcare outcome report"@en) +SubClassOf(obo:OGMS_0000150 obo:IAO_0000027) + ) \ No newline at end of file