From e94e58143e9c9f18b22a4faa658a9e846223d796 Mon Sep 17 00:00:00 2001
From: Mike Henry <11765982+mikemhenry@users.noreply.github.com>
Date: Wed, 19 Nov 2025 12:04:13 -0700
Subject: [PATCH 1/2] let setuptools auto detect pkg layout and remove deps

---
 pyproject.toml | 8 --------
 1 file changed, 8 deletions(-)

diff --git a/pyproject.toml b/pyproject.toml
index c3c2abb..21218a3 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -32,11 +32,6 @@ urls = {Homepage = "https://github.com/OpenFreeEnergy/Lomap"}
 keywords = ['alchemical free energy', 'setup', 'perturbation', 'network']
 requires-python = ">= 3.9"
 dependencies = [
-    "numpy",
-    "networkx",
-    "matplotlib",
-    "rdkit",
-    "gufe>=0.9.0",
 ]
 dynamic = ["version"]
 
@@ -55,8 +50,5 @@ lomap = "lomap.dbmol:startup"
 zip-safe = false
 include-package-data = true
 
-[tool.setuptools.packages]
-find = {namespaces = false}
-
 [tool.setuptools_scm]
 fallback_version = "0.0.0"

From f72e368854023833cdfa50ab7ad8ac7acc111b2c Mon Sep 17 00:00:00 2001
From: Mike Henry <11765982+mikemhenry@users.noreply.github.com>
Date: Wed, 19 Nov 2025 12:12:07 -0700
Subject: [PATCH 2/2] fix 'Pattern 'LICENSE' did not match any files.' warning

---
 pyproject.toml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/pyproject.toml b/pyproject.toml
index 21218a3..fed1df9 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -12,7 +12,7 @@ readme = "README.md"
 authors = [{name = "Gaetano Calabro and David Mobley"}]
 maintainers = [{name = "The Open Free Energy developers", email = "openfreeenergy@omsf.io"}]
 license = "MIT"
-license-files = ["LICENSE"]
+license-files = ["LICENSE.txt"]
 classifiers = [
     "Development Status :: 5 - Production/Stable",
     "Environment :: Console",