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patch_output.txt
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executable file
·1829 lines (1693 loc) · 146 KB
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changes_to_apply.patch:661: trailing whitespace.
changes_to_apply.patch:705: trailing whitespace.
changes_to_apply.patch:934: trailing whitespace.
logging.server.include-after-request = true
changes_to_apply.patch:955: trailing whitespace.
filter.plugins = ImageMagick Video Thumbnail
changes_to_apply.patch:1255: trailing whitespace.
# https://stackoverflow.com/a/50563298
Checking patch .github/ISSUE_TEMPLATE/bug_report.md...
Checking patch .github/ISSUE_TEMPLATE/feature_request.md...
Checking patch .github/bug-report---.md...
error: .github/bug-report---.md: No such file or directory
Checking patch .github/feature-request---.md...
error: .github/feature-request---.md: No such file or directory
Checking patch .github/pull_request_template.md...
Checking patch .gitignore...
Checking patch README.md...
error: while searching for:
<br />
<div align="center">
<a href="https://github.com/PEDSnet/PEDSpace">
<img src="images/logo.png" alt="Logo">
</a>
<h3 align="center"><a href="https://pedsdspace01.research.chop.edu/home">PEDSpace</a></h3>
<p align="left">
PEDSpace is a robust implementation of the <a href="https://github.com/DSpace/DSpace" target="_blank">open-source DSpace software bundle</a>, designed to store and retrieve digital assets generated during PEDSnet studies. PEDSpace serves as a centralized hub where digital assets are made readily accessible to researchers, clinicians, and stakeholders worldwide.
error: patch failed: README.md:27
error: while searching for:
<a href="https://wiki.lyrasis.org/display/DSDOC8x/Introduction"><strong>Learn more about DSpace »</strong></a>
<br />
<br />
<a href="https://pedsdspace01.research.chop.edu/home">View Demo*</a>
·
<a href="https://github.com/PEDSnet/PEDSpace/issues/new?labels=bug&template=bug-report---.md">Report Bug</a>
·
error: patch failed: README.md:40
error: while searching for:
<!-- ROADMAP -->
## Roadmap
- [ ] Feature 1
- [ ] Feature 2
- [ ] Feature 3
- [ ] Nested Feature
See the [open issues](https://github.com/PEDSnet/PEDSpace/issues) or the [project board](insert-link-here) for a full list of proposed features (and known issues).
<p align="right">(<a href="#readme-top">back to top</a>)</p>
error: patch failed: README.md:96
Checking patch angular.json...
Hunk #1 succeeded at 61 (offset -6 lines).
Hunk #2 succeeded at 70 (offset -6 lines).
Hunk #3 succeeded at 102 (offset -6 lines).
error: while searching for:
"builder": "@angular-builders/custom-webpack:dev-server",
"options": {
"allowedHosts": [
"10.30.11.25"
],
"buildTarget": "dspace-angular:build",
"port": 4000,
"disableHostCheck": true
},
"configurations": {
"development": {
error: patch failed: angular.json:115
Checking patch config/.gitignore...
error: while searching for:
config.*.yml
!config.dev.yml
!config.example.yml
error: patch failed: config/.gitignore:1
Checking patch config/config.prod.yml...
error: config/config.prod.yml: No such file or directory
Checking patch config/configs/authentication-oidc.linked.cfg...
Checking patch config/configs/authentication.cfg...
Checking patch config/configs/authentication.linked.cfg...
Checking patch config/configs/authority.cfg...
Checking patch config/configs/authority.linked.cfg...
Checking patch config/config.dev.yml => config/configs/config.dev.yml...
error: config/config.dev.yml: No such file or directory
Checking patch config/config.example.yml => config/configs/config.example.yml...
Checking patch config/config.yml => config/configs/config.yml...
Checking patch config/configs/curate.cfg...
Checking patch config/configs/curate.linked.cfg...
Checking patch config/dspace.cfg => config/configs/dspace.cfg...
error: config/dspace.cfg: No such file or directory
Checking patch config/configs/dspace.linked.cfg...
Checking patch config/local.cfg => config/configs/local.cfg...
error: config/local.cfg: No such file or directory
Checking patch config/configs/local.linked.cfg...
Checking patch config/configs/pgpass.example...
Checking patch config/dspace.cfg.linked...
error: config/dspace.cfg.linked: No such file or directory
Checking patch config/dtds/relationship-types.dtd...
Checking patch config/dtds/submission-forms.dtd...
Checking patch config/local.cfg.linked...
error: config/local.cfg.linked: No such file or directory
Checking patch config/organize_logs/organize_2025-01-07-12-52-04.log...
Checking patch config/others/CopyHierarchicalSubjectsToFlat.java...
Checking patch config/scripts/dspace_backup.sh...
Checking patch config/scripts/dspace_crontab.sh...
Checking patch config/scripts/dspace_restore.sh...
Checking patch config/scripts/dspace_solr_dump.sh...
Checking patch config/scripts/map_uuids.py...
Checking patch config/scripts/organize_files.sh...
Checking patch config/scripts/populate_subject_flat.py...
Checking patch config/scripts/root_backup_crontab.sh...
Checking patch config/scripts/update_vocab.py...
Checking patch config/scripts/user_backup_crontab.sh...
Checking patch config/xmls/dc_subject.linked.xml...
Checking patch config/xmls/dc_subject.xml...
Checking patch config/xmls/dc_subject_mesh.linked.xml...
Checking patch config/xmls/dc_subject_mesh.xml...
Checking patch config/xmls/dc_subject_other.linked.xml...
Checking patch config/xmls/dc_subject_other.xml...
Checking patch config/xmls/discovery.linked.xml...
Checking patch config/xmls/discovery.xml...
Checking patch config/xmls/item-submission.linked.xml...
Checking patch config/xmls/item-submission.xml...
Checking patch config/xmls/log4j2-container.linked.xml...
Checking patch config/xmls/log4j2-container.xml...
Checking patch config/xmls/log4j2.linked.xml...
Checking patch config/xmls/log4j2.xml...
Checking patch config/xmls/relationship-formats.xml...
Checking patch config/xmls/relationship-types.linked.xml...
Checking patch config/xmls/relationship-types.xml...
Checking patch config/xmls/submission-forms.linked.xml...
Checking patch config/xmls/submission-forms.xml...
Checking patch config/xmls/virtual-metadata.xml...
Checking patch config/xmls/virtual_metadata.linked.xml...
Checking patch config/xmls/workflow-curation.linked.xml...
Checking patch config/xmls/workflow-curation.xml...
Checking patch config/xmls/workflow.linked.xml...
Checking patch config/xmls/workflow.xml...
Checking patch dspace-ui.json...
Checking patch dspace.linked.log...
Checking patch install_dist.sh...
Checking patch package.json...
error: while searching for:
"lodash": "^4.17.21",
"lru-cache": "^7.14.1",
"markdown-it": "^13.0.1",
"mirador": "^3.3.0",
"mirador-dl-plugin": "^0.13.0",
"mirador-share-plugin": "^0.11.0",
error: patch failed: package.json:116
Checking patch src/app/home-page/top-level-community-list/top-level-community-list.component.html...
error: while searching for:
[hideGear]="true">
</ds-viewable-collection>
</div>
<ds-error *ngIf="communitiesRD?.hasFailed " message="{{'error.top-level-communites' | translate}}"></ds-error>
<ds-loading *ngIf="communitiesRD?.isLoading " message="{{'loading.top-level-communities' | translate}}"></ds-loading></ng-container>
error: patch failed: src/app/home-page/top-level-community-list/top-level-community-list.component.html:11
Checking patch src/app/item-page/field-components/metadata-values/metadata-values.component.html...
error: while searching for:
<ds-metadata-field-wrapper [label]="label | translate">
<ng-container *ngFor="let mdValue of mdValues; let last=last;">
<!--
Choose a template. Priority: markdown, link, browse link.
-->
<ng-container *ngTemplateOutlet="(renderMarkdown ? markdown : (hasLink(mdValue) ? (hasValue(img) ? linkImg : link) : (hasBrowseDefinition() ? browselink : simple)));
context: {value: mdValue.value, img}">
</ng-container>
<span class="separator" *ngIf="!last" [innerHTML]="separator"></span>
</ng-container>
</ds-metadata-field-wrapper>
<!-- Render value as markdown -->
<ng-template #markdown let-value="value">
<span class="dont-break-out" [dsMarkdown]="value">
</span>
</ng-template>
<!-- Render value as a link (href and label) -->
<ng-template #link let-value="value">
<a class="dont-break-out ds-simple-metadata-link" target="_blank" [href]="value">
{{value}}
</a>
</ng-template>
<!-- Render value as a link with icon -->
<ng-template #linkImg let-img="img" let-value="value">
<a [href]="value" class="link-anchor dont-break-out ds-simple-metadata-link" target="_blank">
error: patch failed: src/app/item-page/field-components/metadata-values/metadata-values.component.html:1
Hunk #2 succeeded at 38 (offset -17 lines).
Checking patch src/app/item-page/field-components/metadata-values/metadata-values.component.scss...
Checking patch src/app/item-page/field-components/metadata-values/metadata-values.component.ts...
error: while searching for:
hasInternalLink(linkValue: string): boolean {
return linkValue.startsWith(environment.ui.baseUrl);
}
}
error: patch failed: src/app/item-page/field-components/metadata-values/metadata-values.component.ts:134
Checking patch src/app/item-page/simple/field-components/specific-field/cc-license/item-page-cc-license-field.component.html...
Checking patch src/app/item-page/simple/field-components/specific-field/cc-license/item-page-cc-license-field.component.ts...
Checking patch src/app/item-page/simple/field-components/specific-field/generic/generic-item-page-field.component.ts...
Checking patch src/app/item-page/simple/field-components/specific-field/item-page-field.component.html...
Checking patch src/app/item-page/simple/field-components/specific-field/item-page-field.component.ts...
Hunk #1 succeeded at 79 (offset 10 lines).
Checking patch src/app/item-page/simple/item-types/publication/publication.component.ts...
Checking patch src/app/item-page/versions/item-versions.component.html...
error: while searching for:
<div *ngVar="(versionsRD$ | async)?.payload as versions">
<div *ngVar="(versionRD$ | async)?.payload as itemVersion">
<div class="mb-2" *ngIf="versions?.page?.length > 0 || displayWhenEmpty">
<h2 *ngIf="displayTitle" class="h4">{{"item.version.history.head" | translate}}</h2>
<ds-alert [type]="AlertTypeEnum.Info" *ngIf="itemVersion">
{{ "item.version.history.selected.alert" | translate : {version: itemVersion.version} }}
</ds-alert>
<ds-pagination *ngIf="versions?.page?.length > 0"
(paginationChange)="onPageChange()"
[hideGear]="true"
[hidePagerWhenSinglePage]="true"
[paginationOptions]="options"
[collectionSize]="versions?.totalElements"
[retainScrollPosition]="true">
<table class="table table-striped table-bordered align-middle my-2">
<thead>
<tr>
<th scope="col">{{"item.version.history.table.version" | translate}}</th>
<th scope="col" *ngIf="(showSubmitter$ | async)">{{"item.version.history.table.editor" | translate}}</th>
<th scope="col">{{"item.version.history.table.date" | translate}}</th>
<th scope="col">{{"item.version.history.table.summary" | translate}}</th>
</tr>
</thead>
<tbody>
<tr *ngFor="let version of versions?.page" [id]="'version-row-' + version.id">
<td class="version-row-element-version">
<ds-item-versions-row-element-version [hasDraftVersion]="hasDraftVersion$ | async"
[version]="version"
[item]="item" [displayActions]="displayActions"
[itemVersion]="itemVersion"
[versionBeingEditedNumber]="versionBeingEditedNumber"
(versionsHistoryChange)="getAllVersions($event)"
></ds-item-versions-row-element-version>
</td>
<td class="version-row-element-editor" *ngIf="(showSubmitter$ | async)">
{{version?.submitterName}}
</td>
<td class="version-row-element-date">
{{version?.created | date : 'yyyy-MM-dd HH:mm:ss'}}
</td>
<td class="version-row-element-summary">
<div class="float-left">
<ng-container *ngIf="isThisBeingEdited(version); then editSummary else showSummary"></ng-container>
<ng-template #showSummary>{{version?.summary}}</ng-template>
<ng-template #editSummary>
<input [attr.aria-label]="'item.version.history.table.action.editSummary' | translate"
[(ngModel)]="versionBeingEditedSummary" (keyup.enter)="onSummarySubmit()"
class="form-control" type="text"/>
</ng-template>
</div>
<div class="float-right btn-group edit-field space-children-mr" *ngIf="displayActions">
<!--DISCARD EDIT -->
<ng-container *ngIf="(canEditVersion$(version) | async) && isThisBeingEdited(version)">
<button class="btn btn-sm"
[ngClass]="isThisBeingEdited(version) ? 'btn-outline-warning' : 'btn-outline-primary'"
(click)="disableVersionEditing()"
title="{{'item.version.history.table.action.discardSummary' | translate}}">
<i class="fas fa-undo-alt fa-fw"></i>
</button>
</ng-container>
<!--EDIT / SAVE-->
<ng-container *ngIf="canEditVersion$(version) | async">
<button class="btn btn-outline-primary btn-sm version-row-element-edit"
*ngIf="!isThisBeingEdited(version)"
[disabled]="isAnyBeingEdited(
error: patch failed: src/app/item-page/versions/item-versions.component.html:1
Checking patch src/app/item-page/versions/item-versions.component.ts...
error: while searching for:
TranslateService,
} from '@ngx-translate/core';
import {
BehaviorSubject,
combineLatest,
Observable,
Subscription,
error: patch failed: src/app/item-page/versions/item-versions.component.ts:18
error: while searching for:
import { getItemPageRoute } from '../item-page-routing-paths';
import { ItemVersionsRowElementVersionComponent } from './item-versions-row-element-version/item-versions-row-element-version.component';
@Component({
selector: 'ds-item-versions',
templateUrl: './item-versions.component.html',
error: patch failed: src/app/item-page/versions/item-versions.component.ts:64
error: while searching for:
versionHistory$: Observable<VersionHistory>;
/**
* The version history's list of versions
*/
versionsRD$: BehaviorSubject<RemoteData<PaginatedList<Version>>> = new BehaviorSubject<RemoteData<PaginatedList<Version>>>(null);
/**
* Verify if the list of versions has at least one e-person to display
* Used to hide the "Editor" column when no e-persons are present to display
*/
hasEpersons$: Observable<boolean>;
/**
* Verify if there is an inprogress submission in the version history
* Used to disable the "Create version" button
error: patch failed: src/app/item-page/versions/item-versions.component.ts:126
error: while searching for:
*/
versionBeingEditedSummary: string;
canCreateVersion$: Observable<boolean>;
createVersionTitle$: Observable<string>;
constructor(private versionHistoryService: VersionHistoryDataService,
private versionService: VersionDataService,
private paginationService: PaginationService,
error: patch failed: src/app/item-page/versions/item-versions.component.ts:186
error: while searching for:
*/
getAllVersions(versionHistory$: Observable<VersionHistory>): void {
const currentPagination = this.paginationService.getCurrentPagination(this.options.id, this.options);
combineLatest([versionHistory$, currentPagination]).pipe(
switchMap(([versionHistory, options]: [VersionHistory, PaginationComponentOptions]) => {
return this.versionHistoryService.getVersions(versionHistory.id,
new PaginatedSearchOptions({ pagination: Object.assign({}, options, { currentPage: options.currentPage }) }),
false, true, followLink('item'), followLink('eperson'));
}),
getFirstCompletedRemoteData(),
).subscribe((res: RemoteData<PaginatedList<Version>>) => {
this.versionsRD$.next(res);
});
}
/**
error: patch failed: src/app/item-page/versions/item-versions.component.ts:305
error: while searching for:
);
this.getAllVersions(this.versionHistory$);
this.hasEpersons$ = this.versionsRD$.pipe(
getAllSucceededRemoteData(),
getRemoteDataPayload(),
hasValueOperator(),
map((versions: PaginatedList<Version>) => versions.page.filter((version: Version) => version.eperson !== undefined).length > 0),
startWith(false),
);
this.itemPageRoutes$ = this.versionsRD$.pipe(
getAllSucceededRemoteDataPayload(),
switchMap((versions) => combineLatest(versions.page.map((version) => version.item.pipe(getAllSucceededRemoteDataPayload())))),
map((versions) => {
const itemPageRoutes = {};
versions.forEach((item) => itemPageRoutes[item.uuid] = getItemPageRoute(item));
error: patch failed: src/app/item-page/versions/item-versions.component.ts:348
Hunk #7 succeeded at 387 (offset 1 line).
Checking patch src/app/navbar/expandable-navbar-section/expandable-navbar-section.component.scss...
Checking patch src/app/navbar/navbar-section/navbar-section.component.scss...
error: while searching for:
align-items: center;
height: 100%;
}
error: patch failed: src/app/navbar/navbar-section/navbar-section.component.scss:3
Checking patch src/app/shared/menu/menu-item/menu-item.component.scss...
Checking patch src/app/shared/search/search-filters/search-filter/search-range-filter/search-range-filter.component.html...
error: while searching for:
<div>
<div class="filters py-2">
<form #form="ngForm" (ngSubmit)="onSubmit()" class="add-filter row"
[action]="currentUrl">
<div class="col-6 form-group mb-0">
<label>
<span class="font-weight-bold">
{{'search.filters.filter.' + filterConfig.name + '.min.label' | translate}}
</span>
<input type="text" [(ngModel)]="range[0]" [name]="filterConfig.paramName + '.min'"
class="form-control" (blur)="onSubmit()"
[attr.aria-label]="minLabel"
[placeholder]="minLabel"
/>
</label>
</div>
<div class="col-6">
<label>
<span class="font-weight-bold">
{{'search.filters.filter.' + filterConfig.name + '.max.label' | translate}}
</span>
<input type="text" [(ngModel)]="range[1]" [name]="filterConfig.paramName + '.max'"
class="form-control" (blur)="onSubmit()"
[attr.aria-label]="maxLabel"
[placeholder]="maxLabel"
/>
</label>
</div>
<button class="sr-only" type="submit">
{{'search.filters.search.submit' | translate}}
</button>
</form>
<ng-container *ngIf="shouldShowSlider()">
<nouislider [connect]="true" [config]="config" [min]="min" [max]="max" [step]="1"
[dsDebounce]="250" (onDebounce)="onSubmit()"
(keydown)="startKeyboardControl()" (keyup)="stopKeyboardControl()"
[(ngModel)]="range" ngDefaultControl>
</nouislider>
</ng-container>
<ng-container *ngFor="let page of (facetValues$ | async)">
<div [@facetLoad]="animationState">
<ds-search-facet-range-option *ngFor="let value of page.page; trackBy: trackUpdate" [filterConfig]="filterConfig" [filterValue]="value" [inPlaceSearch]="inPlaceSearch"></ds-search-facet-range-option>
</div>
</ng-container>
</div>
</div>
error: patch failed: src/app/shared/search/search-filters/search-filter/search-range-filter/search-range-filter.component.html:1
Checking patch src/app/shared/search/search-filters/search-filter/search-range-filter/search-range-filter.component.ts...
error: while searching for:
*/
range: [number | undefined, number | undefined];
/**
* Whether the sider is being controlled by the keyboard.
* Supresses any changes until the key is released.
error: patch failed: src/app/shared/search/search-filters/search-filter/search-range-filter/search-range-filter.component.ts:91
error: while searching for:
};
}
/**
* Submits new custom range values to the range filter from the widget
*/
error: patch failed: src/app/shared/search/search-filters/search-filter/search-range-filter/search-range-filter.component.ts:145
error: while searching for:
shouldShowSlider(): boolean {
return isPlatformBrowser(this.platformId);
}
}
error: patch failed: src/app/shared/search/search-filters/search-filter/search-range-filter/search-range-filter.component.ts:182
Checking patch src/app/shared/utils/markdown.directive.ts...
error: while searching for:
export class MarkdownDirective implements OnInit, OnDestroy {
@Input() dsMarkdown: string;
private alive$ = new Subject<boolean>();
el: HTMLElement;
constructor(
@Inject(MARKDOWN_IT) private markdownIt: LazyMarkdownIt,
protected sanitizer: DomSanitizer,
private mathService: MathService,
private elementRef: ElementRef) {
this.el = elementRef.nativeElement;
}
ngOnInit() {
this.render(this.dsMarkdown);
}
async render(value: string, forcePreview = false): Promise<SafeHtml> {
if (isEmpty(value) || (!environment.markdown.enabled && !forcePreview)) {
return value;
}
const MarkdownIt = await this.markdownIt;
const md = new MarkdownIt({
html: true,
linkify: true,
});
const html = this.sanitizer.sanitize(SecurityContext.HTML, md.render(value));
this.el.innerHTML = html;
if (environment.markdown.mathjax) {
this.renderMathjax();
}
}
private renderMathjax() {
this.mathService.ready().pipe(
filter((ready) => ready),
error: patch failed: src/app/shared/utils/markdown.directive.ts:37
Hunk #3 succeeded at 97 (offset -104 lines).
Checking patch src/assets/i18n/en.json5...
error: while searching for:
"browse.back.all-results": "All browse results",
"browse.comcol.by.author": "By Author",
"browse.comcol.by.dateissued": "By Issue Date",
"browse.comcol.by.subject": "By Subject",
"browse.comcol.by.srsc": "By Subject Category",
"browse.comcol.by.nsi": "By Norwegian Science Index",
"browse.comcol.by.title": "By Title",
"browse.comcol.head": "Browse",
"browse.empty": "No items to show.",
"browse.metadata.author": "Author",
"browse.metadata.relation": "Relation",
"browse.metadata.type": "Type",
"browse.metadata.dateissued": "Issue Date",
"browse.metadata.subject": "Subject",
"browse.metadata.title": "Title",
"browse.metadata.srsc": "Subject Category",
"browse.metadata.author.breadcrumbs": "Browse by Author",
"browse.metadata.dateissued.breadcrumbs": "Browse by Date",
"browse.metadata.subject.breadcrumbs": "Browse by Subject",
"browse.metadata.srsc.breadcrumbs": "Browse by Subject Category",
"browse.metadata.srsc.tree.descrption": "Select a subject to add as search filter",
"browse.metadata.nsi.breadcrumbs": "Browse by Norwegian Science Index",
error: patch failed: src/assets/i18n/en.json5:1000
error: while searching for:
"collection.listelement.badge": "Domain",
"collection.logo": "Domain logo",
"collection.page.browse.search.head": "Search",
error: patch failed: src/assets/i18n/en.json5:1316
error: while searching for:
"community.browse.logo": "Browse for a collection logo",
"community.subcoms-cols.breadcrumbs": "Subcommunities and Domains",
"community.create.breadcrumbs": "Create Collection",
error: patch failed: src/assets/i18n/en.json5:1406
error: while searching for:
"community.page.news": "News",
"community.all-lists.head": "Subcommunities and Domains",
"community.search.results.head": "Search Results",
error: patch failed: src/assets/i18n/en.json5:1564
error: while searching for:
"item.page.relationships.isOrgUnitOfProject": "Research Projects",
"item.page.subject": "Vocabularies",
"item.page.subject.mesh": "Clinical Subjects",
error: patch failed: src/assets/i18n/en.json5:2766
error: while searching for:
"item.page.image.alt.ROR": "ROR logo",
"item.preview.dc.identifier.uri": "Identifier:",
"item.preview.dc.contributor.author": "Creators",
"item.preview.dc.contributor.advisor": "Reviewers",
"item.preview.dc.contributor.other": "Affiliations",
"item.preview.dc.date": "Last Modified:",
"item.preview.dc.date.issued": "Created:",
"item.preview.dc.description.abstract": "Abstract:",
"item.preview.dc.identifier.other": "Other identifier:",
"item.preview.dc.language.iso": "Language:",
"item.preview.dc.subject": "Subjects:",
"item.preview.dc.subject.other": "Tags:",
"item.preview.dc.title": "Title:",
"item.preview.dc.type": "Type:",
"item.preview.oaire.citation.issue": "Issue",
error: patch failed: src/assets/i18n/en.json5:2798
Hunk #7 succeeded at 3086 (offset -64 lines).
error: while searching for:
"menu.section.admin_search": "Admin Search",
"menu.section.browse_community": "This Collection",
"menu.section.browse_community_by_author": "By Author",
error: patch failed: src/assets/i18n/en.json5:3246
error: while searching for:
"menu.section.browse_global_by_dateissued": "By Issue Date",
"menu.section.browse_global_by_type": "By Type",
"menu.section.browse_global_by_relation": "By Relation",
"menu.section.browse_global_by_subject": "By Subject",
"menu.section.browse_global_by_srsc": "By Subject Category",
"menu.section.browse_global_by_nsi": "By Norwegian Science Index",
"menu.section.browse_global_by_title": "By Title",
error: patch failed: src/assets/i18n/en.json5:3260
Hunk #10 succeeded at 4005 (offset -82 lines).
error: while searching for:
"relationships.isFundingAgencyOf.OrgUnit": "Funder",
"repository.image.logo": "Repository logo",
"repository.title": "PEDSpace",
error: patch failed: src/assets/i18n/en.json5:4200
Hunk #12 succeeded at 4376 (offset -94 lines).
Hunk #13 succeeded at 4434 (offset -94 lines).
Hunk #14 succeeded at 4642 (offset -94 lines).
Hunk #15 succeeded at 5093 (offset -94 lines).
Hunk #16 succeeded at 5170 (offset -94 lines).
Hunk #17 succeeded at 5366 (offset -94 lines).
error: while searching for:
"submission.sections.upload.header.policy.default.withlist": "Please note that uploaded files in the {{collectionName}} domain will be accessible, in addition to what is explicitly decided for the single file, with the following group(s):",
"submission.sections.upload.info": "Here you will find all the files currently in the item. You can update the file metadata and access conditions or <strong>upload additional files by dragging & dropping them anywhere on the page.</strong>",
"submission.sections.upload.no-entry": "No",
error: patch failed: src/assets/i18n/en.json5:5340
Hunk #19 succeeded at 5753 (offset -94 lines).
Hunk #20 succeeded at 5827 (offset -96 lines).
error: while searching for:
"item.page.cc.license.disclaimer": "Except where otherwised noted, this item's license is described as",
"browse.search-form.placeholder": "Search the repository",
}
error: patch failed: src/assets/i18n/en.json5:6765
Checking patch src/assets/i18n/enJSON_editor.py...
Checking patch src/config/config.server.ts...
Checking patch src/index.html...
Checking patch src/themes/PEDSpace/app/browse-by/browse-by-switcher/browse-by-switcher.component.scss...
error: src/themes/PEDSpace/app/browse-by/browse-by-switcher/browse-by-switcher.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/browse-by/browse-by-switcher/browse-by-switcher.component.ts...
error: src/themes/PEDSpace/app/browse-by/browse-by-switcher/browse-by-switcher.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/entity-groups/journal-entities/item-pages/journal-issue/journal-issue.component.ts...
error: src/themes/PEDSpace/app/entity-groups/journal-entities/item-pages/journal-issue/journal-issue.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/entity-groups/research-entities/item-pages/person/person.component.html...
error: src/themes/PEDSpace/app/entity-groups/research-entities/item-pages/person/person.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/footer/footer.component.html...
error: src/themes/PEDSpace/app/footer/footer.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/footer/footer.component.ts...
error: src/themes/PEDSpace/app/footer/footer.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/header/header.component.html...
error: src/themes/PEDSpace/app/header/header.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/header/header.component.scss...
error: src/themes/PEDSpace/app/header/header.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/home-page/home-news/home-news.component.html...
error: src/themes/PEDSpace/app/home-page/home-news/home-news.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/home-page/home-news/home-news.component.scss...
error: src/themes/PEDSpace/app/home-page/home-news/home-news.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/home-page/home-news/home-news.component.ts...
error: src/themes/PEDSpace/app/home-page/home-news/home-news.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/description/item-page-abstract-field.component.spec.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/description/item-page-description.component.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/external/item-page-abstract-field.component.spec.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/external/item-page-external-publication.component.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/local/item-page-local.component.scss...
Checking patch src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/local/item-page-local.component.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/title/item-page-title-field.component.ts...
error: src/themes/PEDSpace/app/item-page/simple/field-components/specific-field/title/item-page-title-field.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/conceptset/conceptset.component.html...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/publication/publication.component.scss => src/themes/PEDSpace/app/item-page/simple/item-types/conceptset/conceptset.component.scss...
error: src/themes/PEDSpace/app/item-page/simple/item-types/publication/publication.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/conceptset/conceptset.component.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/documentation/documentation.component.html...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/documentation/documentation.component.scss...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/documentation/documentation.component.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/dqcheck/dqcheck.component.html...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/dqcheck/dqcheck.component.scss...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/dqcheck/dqcheck.component.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/phenotype/phenotype.component.html...
Checking patch src/themes/pedspace-custom/app/item-page/simple/item-types/publication/publication.component.scss => src/themes/PEDSpace/app/item-page/simple/item-types/phenotype/phenotype.component.scss...
error: src/themes/pedspace-custom/app/item-page/simple/item-types/publication/publication.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/phenotype/phenotype.component.ts...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/publication/publication.component.html...
error: src/themes/PEDSpace/app/item-page/simple/item-types/publication/publication.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/study/study.component.html...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/study/study.component.scss...
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/publication/publication.component.ts => src/themes/PEDSpace/app/item-page/simple/item-types/study/study.component.ts...
error: src/themes/PEDSpace/app/item-page/simple/item-types/publication/publication.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/untyped-item/untyped-item.component.html...
error: src/themes/PEDSpace/app/item-page/simple/item-types/untyped-item/untyped-item.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/item-page/simple/item-types/untyped-item/untyped-item.component.ts...
error: src/themes/PEDSpace/app/item-page/simple/item-types/untyped-item/untyped-item.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/comcol/comcol-page-browse-by/comcol-page-browse-by.component.html...
error: src/themes/PEDSpace/app/shared/comcol/comcol-page-browse-by/comcol-page-browse-by.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/comcol/comcol-page-browse-by/comcol-page-browse-by.component.scss...
error: src/themes/PEDSpace/app/shared/comcol/comcol-page-browse-by/comcol-page-browse-by.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/comcol/comcol-page-browse-by/comcol-page-browse-by.component.ts...
error: src/themes/PEDSpace/app/shared/comcol/comcol-page-browse-by/comcol-page-browse-by.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/badges.component.html...
error: src/themes/PEDSpace/app/shared/object-collection/shared/badges/badges.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/badges.component.scss...
error: src/themes/PEDSpace/app/shared/object-collection/shared/badges/badges.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/badges.component.ts...
error: src/themes/PEDSpace/app/shared/object-collection/shared/badges/badges.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/type-badge/type-badge.component.html...
error: src/themes/PEDSpace/app/shared/object-collection/shared/badges/type-badge/type-badge.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/type-badge/type-badge.component.scss...
error: src/themes/PEDSpace/app/shared/object-collection/shared/badges/type-badge/type-badge.component.scss: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/type-badge/type-badge.component.ts...
error: src/themes/PEDSpace/app/shared/object-collection/shared/badges/type-badge/type-badge.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/verification-badge/verification-badge.component.html...
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/verification-badge/verification-badge.component.scss...
Checking patch src/themes/PEDSpace/app/shared/object-collection/shared/badges/verification-badge/verification-badge.component.ts...
Checking patch src/themes/PEDSpace/app/shared/object-list/search-result-list-element/item-search-result/item-types/item/item-search-result-list-element.component.html...
error: src/themes/PEDSpace/app/shared/object-list/search-result-list-element/item-search-result/item-types/item/item-search-result-list-element.component.html: No such file or directory
Checking patch src/themes/PEDSpace/app/shared/object-list/search-result-list-element/item-search-result/item-types/item/item-search-result-list-element.component.ts...
error: src/themes/PEDSpace/app/shared/object-list/search-result-list-element/item-search-result/item-types/item/item-search-result-list-element.component.ts: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/PEDSnetFinalDrafts-1.png...
error: src/themes/PEDSpace/assets/images/PEDSnetFinalDrafts-1.png: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/PEDSnetLogo.png...
error: src/themes/PEDSpace/assets/images/PEDSnetLogo.png: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/PEDSnetLogoSmall-modified.png...
error: cannot apply binary patch to 'src/themes/PEDSpace/assets/images/PEDSnetLogoSmall-modified.png' without full index line
error: src/themes/PEDSpace/assets/images/PEDSnetLogoSmall-modified.png: patch does not apply
Checking patch src/themes/PEDSpace/assets/images/cross-svgrepo-com.svg...
Checking patch src/themes/PEDSpace/assets/images/favicon/android-chrome-192x192.png...
error: src/themes/PEDSpace/assets/images/favicon/android-chrome-192x192.png: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/favicon/apple-touch-icon.png...
error: src/themes/PEDSpace/assets/images/favicon/apple-touch-icon.png: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/favicon/favicon.ico...
error: src/themes/PEDSpace/assets/images/favicon/favicon.ico: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/favicons/android-chrome-192x192.png...
error: cannot apply binary patch to 'src/themes/PEDSpace/assets/images/favicons/android-chrome-192x192.png' without full index line
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Checking patch src/themes/PEDSpace/assets/images/favicons/android-chrome-384x384.png...
error: cannot apply binary patch to 'src/themes/PEDSpace/assets/images/favicons/android-chrome-384x384.png' without full index line
error: src/themes/PEDSpace/assets/images/favicons/android-chrome-384x384.png: patch does not apply
Checking patch src/themes/PEDSpace/assets/images/favicon/android-chrome-512x512.png => src/themes/PEDSpace/assets/images/favicons/android-chrome-512x512.png...
error: src/themes/PEDSpace/assets/images/favicon/android-chrome-512x512.png: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/favicons/apple-touch-icon.png...
error: cannot apply binary patch to 'src/themes/PEDSpace/assets/images/favicons/apple-touch-icon.png' without full index line
error: src/themes/PEDSpace/assets/images/favicons/apple-touch-icon.png: patch does not apply
Checking patch src/themes/PEDSpace/assets/images/favicons/favicon.ico...
error: cannot apply binary patch to 'src/themes/PEDSpace/assets/images/favicons/favicon.ico' without full index line
error: src/themes/PEDSpace/assets/images/favicons/favicon.ico: patch does not apply
Checking patch src/themes/PEDSpace/assets/images/favicon/favicon.svg => src/themes/PEDSpace/assets/images/favicons/favicon.svg...
error: src/themes/PEDSpace/assets/images/favicon/favicon.svg: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/favicon/manifest.webmanifest => src/themes/PEDSpace/assets/images/favicons/manifest.webmanifest...
error: src/themes/PEDSpace/assets/images/favicon/manifest.webmanifest: No such file or directory
Checking patch src/themes/PEDSpace/assets/images/verified-check-svgrepo-com.svg...
Checking patch src/themes/PEDSpace/eager-theme.module.ts...
error: src/themes/PEDSpace/eager-theme.module.ts: No such file or directory
Checking patch src/themes/PEDSpace/lazy-theme.module.ts...
error: src/themes/PEDSpace/lazy-theme.module.ts: No such file or directory
Checking patch src/themes/PEDSpace/styles/_global-styles.scss...
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Checking patch src/themes/PEDSpace/styles/_theme_css_variable_overrides.scss...
error: src/themes/PEDSpace/styles/_theme_css_variable_overrides.scss: No such file or directory
Checking patch src/themes/PEDSpace/styles/_theme_sass_variable_overrides.scss...
error: src/themes/PEDSpace/styles/_theme_sass_variable_overrides.scss: No such file or directory
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