From a3b63b3d6a350c7a1bc17f5d20e0e9df46227758 Mon Sep 17 00:00:00 2001 From: Mengjia Lyu <53891017+YumekaMengjiaLYU@users.noreply.github.com> Date: Mon, 20 Sep 2021 11:51:28 -0400 Subject: [PATCH] Update bootstrap-xcp.sh fixed typo --- scripts/cubic/bootstrap-xcp.sh | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/scripts/cubic/bootstrap-xcp.sh b/scripts/cubic/bootstrap-xcp.sh index 3b3d76f..c0c6801 100644 --- a/scripts/cubic/bootstrap-xcp.sh +++ b/scripts/cubic/bootstrap-xcp.sh @@ -236,7 +236,7 @@ cd inputs/data 7z x ${subid}_fmriprep-20.2.3.zip cd $wd -mkdir -p ${PWD}/.git/tmp/wdir +mkdir -p ${PWD}/.git/tmp/wkdir singularity run --cleanenv -B ${PWD} pennlinc-containers/.datalad/environments/xcp-abcd-0-0-4/image inputs/data/fmriprep xcp participant \ --despike --lower-bpf 0.01 --upper-bpf 0.08 --participant_label $subid -p 36P -f 10 -w ${PWD}/.git/tmp/wkdir singularity run --cleanenv -B ${PWD} pennlinc-containers/.datalad/environments/xcp-abcd-0-0-4/image inputs/data/fmriprep xcp participant \