diff --git a/scripts/cubic/bootstrap-fmriprep-multises-audit.sh b/scripts/cubic/bootstrap-fmriprep-multises-audit.sh index 7bed511..8ac802e 100644 --- a/scripts/cubic/bootstrap-fmriprep-multises-audit.sh +++ b/scripts/cubic/bootstrap-fmriprep-multises-audit.sh @@ -296,7 +296,7 @@ cd concat_ds/code wget https://raw.githubusercontent.com/PennLINC/RBC/master/PennLINC/Generic/concatenator.py cd .. datalad save -m "added concatenator script" -datalad run -i 'csvs/*' -o 'concat_ds/group_report.csv' --expand inputs --explicit "python code/concatenator.py concat_ds/csvs ${PROJECT_ROOT}/FMRIPREP_AUDIT.csv" +datalad run -i 'csvs/*' -o 'concat_ds/group_report.csv' --expand inputs --explicit "python code/concatenator.py csvs ${PROJECT_ROOT}/FMRIPREP_AUDIT.csv" datalad save -m "generated report" # push changes