diff --git a/README.Rmd b/README.Rmd index 336c9c0..4e36ebe 100644 --- a/README.Rmd +++ b/README.Rmd @@ -71,4 +71,4 @@ hidecan_plot( If using HIDECAN, please cite: -Angelin-Bonnet, O., Vignes, M., Biggs, P. J., Baldwin, S., & Thomson, S. (2023). Visual integration of GWAS and differential expression results with the hidecan R package. bioRxiv, 2023-03. +Angelin-Bonnet, O., Vignes, M., Biggs, P. J., Baldwin, S., & Thomson, S. (2024). Visual Integration of Genome-Wide Association Studies and Differential Expression Results with the Hidecan R Package. Genes, 15(10), 1244. diff --git a/hidecan.Rproj b/hidecan.Rproj index 4218dd8..cb1f5fb 100644 --- a/hidecan.Rproj +++ b/hidecan.Rproj @@ -1,4 +1,5 @@ Version: 1.0 +ProjectId: a24ce321-13c2-4b92-9944-ac401547eaa0 RestoreWorkspace: No SaveWorkspace: No diff --git a/renv.lock b/renv.lock index 3fad80f..98740c9 100644 --- a/renv.lock +++ b/renv.lock @@ -1,6 +1,6 @@ { "R": { - "Version": "4.4.1", + "Version": "4.4.2", "Repositories": [ { "Name": "CRAN", @@ -12,15 +12,8 @@ "DBI": { "Package": "DBI", "Version": "1.2.3", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "DBI", - "RemoteRef": "DBI", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.2.3", + "Source": "Repository", + "Repository": "CRAN", "Hash": "065ae649b05f1ff66bb0c793107508f5", "Requirements": [] }, @@ -33,8 +26,8 @@ "RemoteUsername": "jendelman", "RemoteRepo": "GWASpoly", "RemoteRef": "master", - "RemoteSha": "c8c80a5ec5c08b4f9dc48840cab0aa02d046b1ad", - "Hash": "b5c8403cc1ef528bcadd5a51b90d6038", + "RemoteSha": "101e81877002f8e41dfef8e02af6a1393761fe27", + "Hash": "dbb3a403b7f93296519eb548f36915df", "Requirements": [ "Matrix", "ggplot2", @@ -47,59 +40,52 @@ }, "MASS": { "Package": "MASS", - "Version": "7.3-60.2", + "Version": "7.3-61", "Source": "Repository", "Repository": "CRAN", - "Hash": "2f342c46163b0b54d7b64d1f798e2c78", + "Hash": "0cafd6f0500e5deba33be22c46bf6055", "Requirements": [] }, "Matrix": { "Package": "Matrix", - "Version": "1.7-0", + "Version": "1.7-1", "Source": "Repository", "Repository": "CRAN", - "Hash": "1920b2f11133b12350024297d8a4ff4a", + "Hash": "5122bb14d8736372411f955e1b16bc8a", "Requirements": [ "lattice" ] }, "R6": { "Package": "R6", - "Version": "2.5.1", + "Version": "2.6.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "470851b6d5d0ac559e9d01bb352b4021", + "Hash": "d4335fe7207f1c01ab8c41762f5840d4", "Requirements": [] }, "RColorBrewer": { "Package": "RColorBrewer", "Version": "1.1-3", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "RColorBrewer", - "RemoteRef": "RColorBrewer", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.1-3", + "Source": "Repository", + "Repository": "RSPM", "Hash": "45f0398006e83a5b10b72a90663d8d8c", "Requirements": [] }, "Rcpp": { "Package": "Rcpp", - "Version": "1.0.12", + "Version": "1.0.14", "Source": "Repository", "Repository": "CRAN", - "Hash": "5ea2700d21e038ace58269ecdbeb9ec0", + "Hash": "e7bdd9ee90e96921ca8a0f1972d66682", "Requirements": [] }, "askpass": { "Package": "askpass", - "Version": "1.2.0", + "Version": "1.2.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "cad6cf7f1d5f6e906700b9d3e718c796", + "Hash": "c39f4155b3ceb1a9a2799d700fbd4b6a", "Requirements": [ "sys" ] @@ -107,15 +93,8 @@ "backports": { "Package": "backports", "Version": "1.5.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "backports", - "RemoteRef": "backports", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.5.0", + "Source": "Repository", + "Repository": "RSPM", "Hash": "e1e1b9d75c37401117b636b7ae50827a", "Requirements": [] }, @@ -123,24 +102,24 @@ "Package": "base64enc", "Version": "0.1-3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "543776ae6848fde2f48ff3816d0628bc", "Requirements": [] }, "bit": { "Package": "bit", - "Version": "4.0.5", + "Version": "4.6.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "d242abec29412ce988848d0294b208fd", + "Hash": "ebe86ffd194564abdc895d87742d5a29", "Requirements": [] }, "bit64": { "Package": "bit64", - "Version": "4.0.5", + "Version": "4.6.0-1", "Source": "Repository", "Repository": "CRAN", - "Hash": "9fe98599ca456d6552421db0d6772d8f", + "Hash": "4f572fbc586294afff277db583b9060f", "Requirements": [ "bit" ] @@ -148,15 +127,8 @@ "blob": { "Package": "blob", "Version": "1.2.4", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "blob", - "RemoteRef": "blob", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.2.4", + "Source": "Repository", + "Repository": "CRAN", "Hash": "40415719b5a479b87949f3aa0aee737c", "Requirements": [ "rlang", @@ -181,17 +153,10 @@ }, "broom": { "Package": "broom", - "Version": "1.0.6", - "Source": "CRAN", + "Version": "1.0.7", + "Source": "Repository", "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "broom", - "RemoteRef": "broom", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.0.6", - "Hash": "a4652c36d1f8abfc3ddf4774f768c934", + "Hash": "8fcc818f3b9887aebaf206f141437cc9", "Requirements": [ "backports", "dplyr", @@ -207,10 +172,10 @@ }, "bslib": { "Package": "bslib", - "Version": "0.7.0", + "Version": "0.9.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "8644cc53f43828f19133548195d7e59e", + "Hash": "70a6489cc254171fb9b4a7f130f44dca", "Requirements": [ "base64enc", "cachem", @@ -229,7 +194,7 @@ "Package": "cachem", "Version": "1.1.0", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "cd9a672193789068eb5a2aad65a0dedf", "Requirements": [ "fastmap", @@ -239,15 +204,8 @@ "callr": { "Package": "callr", "Version": "3.7.6", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "callr", - "RemoteRef": "callr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "3.7.6", + "Source": "Repository", + "Repository": "RSPM", "Hash": "d7e13f49c19103ece9e58ad2d83a7354", "Requirements": [ "R6", @@ -257,15 +215,8 @@ "cellranger": { "Package": "cellranger", "Version": "1.1.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "cellranger", - "RemoteRef": "cellranger", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.1.0", + "Source": "Repository", + "Repository": "CRAN", "Hash": "f61dbaec772ccd2e17705c1e872e9e7c", "Requirements": [ "rematch", @@ -274,55 +225,41 @@ }, "cli": { "Package": "cli", - "Version": "3.6.3", + "Version": "3.6.4", "Source": "Repository", "Repository": "CRAN", - "Hash": "b21916dd77a27642b447374a5d30ecf3", + "Hash": "491c34d3d9dd0d2fe13d9f278bb90795", "Requirements": [] }, "clipr": { "Package": "clipr", "Version": "0.8.0", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "3f038e5ac7f41d4ac41ce658c85e3042", "Requirements": [] }, "colorspace": { "Package": "colorspace", "Version": "2.1-1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "colorspace", - "RemoteRef": "colorspace", - "RemoteRepos": "https://cran.rstudio.com", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.1-1", + "Source": "Repository", + "Repository": "CRAN", "Hash": "d954cb1c57e8d8b756165d7ba18aa55a", "Requirements": [] }, "commonmark": { "Package": "commonmark", - "Version": "1.9.1", + "Version": "1.9.5", "Source": "Repository", "Repository": "CRAN", - "Hash": "5d8225445acb167abf7797de48b2ee3c", + "Hash": "4ac08754c8ed35996b7c343fbb22885a", "Requirements": [] }, "conflicted": { "Package": "conflicted", "Version": "1.2.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "conflicted", - "RemoteRef": "conflicted", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.2.0", + "Source": "Repository", + "Repository": "CRAN", "Hash": "bb097fccb22d156624fd07cd2894ddb6", "Requirements": [ "cli", @@ -332,26 +269,26 @@ }, "cpp11": { "Package": "cpp11", - "Version": "0.4.7", + "Version": "0.5.2", "Source": "Repository", "Repository": "CRAN", - "Hash": "5a295d7d963cc5035284dcdbaf334f4e", + "Hash": "2720e3fd3dad08f34b19b56b3d6f073d", "Requirements": [] }, "crayon": { "Package": "crayon", "Version": "1.5.3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "859d96e65ef198fd43e82b9628d593ef", "Requirements": [] }, "credentials": { "Package": "credentials", - "Version": "2.0.1", + "Version": "2.0.2", "Source": "Repository", "Repository": "CRAN", - "Hash": "c7844b32098dcbd1c59cbd8dddb4ecc6", + "Hash": "09fd631e607a236f8cc7f9604db32cb8", "Requirements": [ "askpass", "curl", @@ -362,39 +299,25 @@ }, "curl": { "Package": "curl", - "Version": "5.2.1", + "Version": "6.2.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "411ca2c03b1ce5f548345d2fc2685f7a", + "Hash": "d65efa2a203bb99faa78690eee928f30", "Requirements": [] }, "data.table": { "Package": "data.table", - "Version": "1.15.4", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "data.table", - "RemoteRef": "data.table", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.15.4", - "Hash": "8ee9ac56ef633d0c7cab8b2ca87d683e", + "Version": "1.17.0", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "d06cd1a942bb17b607df7d57048d6840", "Requirements": [] }, "dbplyr": { "Package": "dbplyr", "Version": "2.5.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "dbplyr", - "RemoteRef": "dbplyr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.5.0", + "Source": "Repository", + "Repository": "CRAN", "Hash": "39b2e002522bfd258039ee4e889e0fd1", "Requirements": [ "DBI", @@ -468,10 +391,10 @@ }, "digest": { "Package": "digest", - "Version": "0.6.36", + "Version": "0.6.37", "Source": "Repository", "Repository": "CRAN", - "Hash": "fd6824ad91ede64151e93af67df6376b", + "Hash": "33698c4b3127fc9f506654607fb73676", "Requirements": [] }, "downlit": { @@ -496,15 +419,8 @@ "dplyr": { "Package": "dplyr", "Version": "1.1.4", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "dplyr", - "RemoteRef": "dplyr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.1.4", + "Source": "Repository", + "Repository": "RSPM", "Hash": "fedd9d00c2944ff00a0e2696ccf048ec", "Requirements": [ "R6", @@ -523,15 +439,8 @@ "dtplyr": { "Package": "dtplyr", "Version": "1.3.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "dtplyr", - "RemoteRef": "dtplyr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.3.1", + "Source": "Repository", + "Repository": "CRAN", "Hash": "54ed3ea01b11e81a86544faaecfef8e2", "Requirements": [ "cli", @@ -557,32 +466,25 @@ }, "evaluate": { "Package": "evaluate", - "Version": "0.24.0", + "Version": "1.0.3", "Source": "Repository", "Repository": "CRAN", - "Hash": "a1066cbc05caee9a4bf6d90f194ff4da", + "Hash": "e9651417729bbe7472e32b5027370e79", "Requirements": [] }, "fansi": { "Package": "fansi", "Version": "1.0.6", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "962174cf2aeb5b9eea581522286a911f", "Requirements": [] }, "farver": { "Package": "farver", "Version": "2.1.2", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "farver", - "RemoteRef": "farver", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.1.2", + "Source": "Repository", + "Repository": "RSPM", "Hash": "680887028577f3fa2a81e410ed0d6e42", "Requirements": [] }, @@ -596,10 +498,10 @@ }, "fontawesome": { "Package": "fontawesome", - "Version": "0.5.2", + "Version": "0.5.3", "Source": "Repository", "Repository": "CRAN", - "Hash": "c2efdd5f0bcd1ea861c2d4e2a883a67d", + "Hash": "bd1297f9b5b1fc1372d19e2c4cd82215", "Requirements": [ "htmltools", "rlang" @@ -608,15 +510,8 @@ "forcats": { "Package": "forcats", "Version": "1.0.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "forcats", - "RemoteRef": "forcats", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.0.0", + "Source": "Repository", + "Repository": "RSPM", "Hash": "1a0a9a3d5083d0d573c4214576f1e690", "Requirements": [ "cli", @@ -629,24 +524,17 @@ }, "fs": { "Package": "fs", - "Version": "1.6.4", + "Version": "1.6.5", "Source": "Repository", "Repository": "CRAN", - "Hash": "15aeb8c27f5ea5161f9f6a641fafd93a", + "Hash": "7f48af39fa27711ea5fbd183b399920d", "Requirements": [] }, "gargle": { "Package": "gargle", "Version": "1.5.2", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "gargle", - "RemoteRef": "gargle", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.5.2", + "Source": "Repository", + "Repository": "CRAN", "Hash": "fc0b272e5847c58cd5da9b20eedbd026", "Requirements": [ "cli", @@ -664,24 +552,17 @@ "generics": { "Package": "generics", "Version": "0.1.3", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "generics", - "RemoteRef": "generics", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.1.3", + "Source": "Repository", + "Repository": "RSPM", "Hash": "15e9634c0fcd294799e9b2e929ed1b86", "Requirements": [] }, "gert": { "Package": "gert", - "Version": "2.0.1", + "Version": "2.1.4", "Source": "Repository", "Repository": "CRAN", - "Hash": "f70d3fe2d9e7654213a946963d1591eb", + "Hash": "ae855ad6d7be20dd7b05d43d25700398", "Requirements": [ "askpass", "credentials", @@ -691,12 +572,43 @@ "zip" ] }, + "ggfun": { + "Package": "ggfun", + "Version": "0.1.8", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "ec2db46b707458520f6cd821cb313732", + "Requirements": [ + "cli", + "dplyr", + "ggplot2", + "rlang", + "yulab.utils" + ] + }, + "ggimage": { + "Package": "ggimage", + "Version": "0.3.3", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "18c57347f13a654ef8683a6676042624", + "Requirements": [ + "ggfun", + "ggplot2", + "ggplotify", + "jsonlite", + "magick", + "scales", + "tibble", + "withr" + ] + }, "ggnewscale": { "Package": "ggnewscale", - "Version": "0.5.0", + "Version": "0.5.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "0e4714a05e572eacd7c232fde675558e", + "Hash": "661a139f3bd18502294baf2f86cccc20", "Requirements": [ "ggplot2" ] @@ -704,15 +616,8 @@ "ggplot2": { "Package": "ggplot2", "Version": "3.5.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "ggplot2", - "RemoteRef": "ggplot2", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "3.5.1", + "Source": "Repository", + "Repository": "RSPM", "Hash": "44c6a2f8202d5b7e878ea274b1092426", "Requirements": [ "MASS", @@ -729,12 +634,24 @@ "withr" ] }, + "ggplotify": { + "Package": "ggplotify", + "Version": "0.1.2", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "1547863db3b472cf7181973acf649f1a", + "Requirements": [ + "ggplot2", + "gridGraphics", + "yulab.utils" + ] + }, "ggrepel": { "Package": "ggrepel", - "Version": "0.9.5", + "Version": "0.9.6", "Source": "Repository", "Repository": "CRAN", - "Hash": "cc3361e234c4a5050e29697d675764aa", + "Hash": "3d4156850acc1161f2f24bc61c9217c1", "Requirements": [ "Rcpp", "ggplot2", @@ -770,24 +687,17 @@ }, "glue": { "Package": "glue", - "Version": "1.7.0", + "Version": "1.8.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "e0b3a53876554bd45879e596cdb10a52", + "Hash": "5899f1eaa825580172bb56c08266f37c", "Requirements": [] }, "googledrive": { "Package": "googledrive", "Version": "2.1.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "googledrive", - "RemoteRef": "googledrive", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.1.1", + "Source": "Repository", + "Repository": "CRAN", "Hash": "e99641edef03e2a5e87f0a0b1fcc97f4", "Requirements": [ "cli", @@ -809,15 +719,8 @@ "googlesheets4": { "Package": "googlesheets4", "Version": "1.1.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "googlesheets4", - "RemoteRef": "googlesheets4", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.1.1", + "Source": "Repository", + "Repository": "CRAN", "Hash": "d6db1667059d027da730decdc214b959", "Requirements": [ "cellranger", @@ -842,25 +745,26 @@ "Package": "gridExtra", "Version": "2.3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "7d7f283939f563670a697165b2cf5560", "Requirements": [ "gtable" ] }, + "gridGraphics": { + "Package": "gridGraphics", + "Version": "0.5-1", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "5b79228594f02385d4df4979284879ae", + "Requirements": [] + }, "gtable": { "Package": "gtable", - "Version": "0.3.5", - "Source": "CRAN", + "Version": "0.3.6", + "Source": "Repository", "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "gtable", - "RemoteRef": "gtable", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.3.5", - "Hash": "e18861963cbc65a27736e02b3cd3c4a0", + "Hash": "de949855009e2d4d0e52a844e30617ae", "Requirements": [ "cli", "glue", @@ -871,15 +775,8 @@ "haven": { "Package": "haven", "Version": "2.5.4", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "haven", - "RemoteRef": "haven", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.5.4", + "Source": "Repository", + "Repository": "RSPM", "Hash": "9171f898db9d9c4c1b2c745adc2c1ef1", "Requirements": [ "cli", @@ -894,11 +791,35 @@ "vctrs" ] }, + "hexSticker": { + "Package": "hexSticker", + "Version": "0.4.9", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "c624f6eb9e15082a672b5e6277257567", + "Requirements": [ + "ggimage", + "ggplot2", + "hexbin", + "showtext", + "sysfonts" + ] + }, + "hexbin": { + "Package": "hexbin", + "Version": "1.28.5", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "10a44851f04ff2d0e26b1c84c38d914a", + "Requirements": [ + "lattice" + ] + }, "highr": { "Package": "highr", "Version": "0.11", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "d65ba49117ca223614f71b60d85b8ab7", "Requirements": [ "xfun" @@ -908,7 +829,7 @@ "Package": "hms", "Version": "1.1.3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "b59377caa7ed00fa41808342002138f9", "Requirements": [ "lifecycle", @@ -921,7 +842,7 @@ "Package": "htmltools", "Version": "0.5.8.1", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "81d371a9cc60640e74e4ab6ac46dcedc", "Requirements": [ "base64enc", @@ -960,15 +881,8 @@ "httr": { "Package": "httr", "Version": "1.4.7", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "httr", - "RemoteRef": "httr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.4.7", + "Source": "Repository", + "Repository": "RSPM", "Hash": "ac107251d9d9fd72f0ca8049988f1d7f", "Requirements": [ "R6", @@ -980,10 +894,10 @@ }, "httr2": { "Package": "httr2", - "Version": "1.0.1", + "Version": "1.1.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "03d741c92fda96d98c3a3f22494e3b4a", + "Hash": "637dfd6294964bd23b07e5eb9b3cab11", "Requirements": [ "R6", "cli", @@ -1001,15 +915,8 @@ "ids": { "Package": "ids", "Version": "1.0.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "ids", - "RemoteRef": "ids", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.0.1", + "Source": "Repository", + "Repository": "CRAN", "Hash": "99df65cfef20e525ed38c3d2577f7190", "Requirements": [ "openssl", @@ -1027,15 +934,8 @@ "isoband": { "Package": "isoband", "Version": "0.2.7", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "isoband", - "RemoteRef": "isoband", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.2.7", + "Source": "Repository", + "Repository": "RSPM", "Hash": "0080607b4a1a7b28979aecef976d8bc2", "Requirements": [] }, @@ -1043,7 +943,7 @@ "Package": "jquerylib", "Version": "0.1.4", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "5aab57a3bd297eee1c1d862735972182", "Requirements": [ "htmltools" @@ -1051,18 +951,18 @@ }, "jsonlite": { "Package": "jsonlite", - "Version": "1.8.8", + "Version": "1.9.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "e1b9c55281c5adc4dd113652d9e26768", + "Hash": "c72fbb0e7ee73ea7497ffeebe44f0d91", "Requirements": [] }, "knitr": { "Package": "knitr", - "Version": "1.48", + "Version": "1.50", "Source": "Repository", "Repository": "CRAN", - "Hash": "acf380f300c721da9fde7df115a5f86f", + "Hash": "5a07d8ec459d7b80bd4acca5f4a6e062", "Requirements": [ "evaluate", "highr", @@ -1073,24 +973,17 @@ "labeling": { "Package": "labeling", "Version": "0.4.3", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "labeling", - "RemoteRef": "labeling", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.4.3", + "Source": "Repository", + "Repository": "RSPM", "Hash": "b64ec208ac5bc1852b285f665d6368b3", "Requirements": [] }, "later": { "Package": "later", - "Version": "1.3.2", + "Version": "1.4.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "a3e051d405326b8b0012377434c62b37", + "Hash": "501744395cac0bab0fbcfab9375ae92c", "Requirements": [ "Rcpp", "rlang" @@ -1108,7 +1001,7 @@ "Package": "lifecycle", "Version": "1.0.4", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "b8552d117e1b808b09a832f589b79035", "Requirements": [ "cli", @@ -1118,27 +1011,32 @@ }, "lubridate": { "Package": "lubridate", - "Version": "1.9.3", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "lubridate", - "RemoteRef": "lubridate", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.9.3", - "Hash": "680ad542fbcf801442c83a6ac5a2126c", + "Version": "1.9.4", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "be38bc740fc51783a78edb5a157e4104", "Requirements": [ "generics", "timechange" ] }, + "magick": { + "Package": "magick", + "Version": "2.8.5", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "9bba16130de599cfe8e6a644911d7f32", + "Requirements": [ + "Rcpp", + "curl", + "magrittr" + ] + }, "magrittr": { "Package": "magrittr", "Version": "2.0.3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "7ce2733a9826b3aeb1775d56fd305472", "Requirements": [] }, @@ -1146,7 +1044,7 @@ "Package": "memoise", "Version": "2.0.1", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "e2817ccf4a065c5d9d7f2cfbe7c1d78c", "Requirements": [ "cachem", @@ -1166,10 +1064,10 @@ }, "mime": { "Package": "mime", - "Version": "0.12", + "Version": "0.13", "Source": "Repository", "Repository": "CRAN", - "Hash": "18e9c28c1d3ca1560ce30658b22ce104", + "Hash": "0ec19f34c72fab674d8f2b4b1c6410e1", "Requirements": [] }, "miniUI": { @@ -1186,15 +1084,8 @@ "modelr": { "Package": "modelr", "Version": "0.1.11", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "modelr", - "RemoteRef": "modelr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.1.11", + "Source": "Repository", + "Repository": "RSPM", "Hash": "4f50122dc256b1b6996a4703fecea821", "Requirements": [ "broom", @@ -1210,15 +1101,8 @@ "munsell": { "Package": "munsell", "Version": "0.5.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "munsell", - "RemoteRef": "munsell", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.5.1", + "Source": "Repository", + "Repository": "RSPM", "Hash": "4fd8900853b746af55b81fda99da7695", "Requirements": [ "colorspace" @@ -1226,33 +1110,32 @@ }, "nlme": { "Package": "nlme", - "Version": "3.1-164", + "Version": "3.1-166", "Source": "Repository", "Repository": "CRAN", - "Hash": "a623a2239e642806158bc4dc3f51565d", + "Hash": "ccbb8846be320b627e6aa2b4616a2ded", "Requirements": [ "lattice" ] }, "openssl": { "Package": "openssl", - "Version": "2.2.0", + "Version": "2.3.2", "Source": "Repository", "Repository": "CRAN", - "Hash": "2bcca3848e4734eb3b16103bc9aa4b8e", + "Hash": "bc54d87ebf858b28de18df4bca6528d3", "Requirements": [ "askpass" ] }, "pillar": { "Package": "pillar", - "Version": "1.9.0", + "Version": "1.10.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "15da5a8412f317beeee6175fbc76f4bb", + "Hash": "8b16b6097daef84cd3c40a6a7c5c9d86", "Requirements": [ "cli", - "fansi", "glue", "lifecycle", "rlang", @@ -1262,10 +1145,10 @@ }, "pkgbuild": { "Package": "pkgbuild", - "Version": "1.4.4", + "Version": "1.4.6", "Source": "Repository", "Repository": "CRAN", - "Hash": "a29e8e134a460a01e0ca67a4763c595b", + "Hash": "2914aa6216361f59e40d5c84667ac155", "Requirements": [ "R6", "callr", @@ -1278,16 +1161,16 @@ "Package": "pkgconfig", "Version": "2.0.3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "01f28d4278f15c76cddbea05899c5d6f", "Requirements": [] }, "pkgdown": { "Package": "pkgdown", - "Version": "2.1.0", + "Version": "2.1.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "0d3d789055c873f48521ce7e23c23f48", + "Hash": "df2912d5873422b55a13002510f02c9f", "Requirements": [ "bslib", "callr", @@ -1342,23 +1225,16 @@ "Package": "prettyunits", "Version": "1.2.0", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "6b01fc98b1e86c4f705ce9dcfd2f57c7", "Requirements": [] }, "processx": { "Package": "processx", - "Version": "3.8.4", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "processx", - "RemoteRef": "processx", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "3.8.4", - "Hash": "0c90a7d71988856bad2a2a45dd871bb9", + "Version": "3.8.6", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "720161b280b0a35f4d1490ead2fe81d0", "Requirements": [ "R6", "ps" @@ -1366,15 +1242,13 @@ }, "profvis": { "Package": "profvis", - "Version": "0.3.8", + "Version": "0.4.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "aa5a3864397ce6ae03458f98618395a1", + "Hash": "bffa126bf92987e677c12cfb5651fc1d", "Requirements": [ "htmlwidgets", - "purrr", "rlang", - "stringr", "vctrs" ] }, @@ -1382,7 +1256,7 @@ "Package": "progress", "Version": "1.2.3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "f4625e061cb2865f111b47ff163a5ca6", "Requirements": [ "R6", @@ -1393,10 +1267,10 @@ }, "promises": { "Package": "promises", - "Version": "1.3.0", + "Version": "1.3.2", "Source": "Repository", "Repository": "CRAN", - "Hash": "434cd5388a3979e74be5c219bcd6e77d", + "Hash": "c84fd4f75ea1f5434735e08b7f50fbca", "Requirements": [ "R6", "Rcpp", @@ -1408,25 +1282,18 @@ }, "ps": { "Package": "ps", - "Version": "1.7.7", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "ps", - "RemoteRef": "ps", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.7.7", - "Hash": "878b467580097e9c383acbb16adab57a", + "Version": "1.9.0", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "8609dabea57eccf858a5923e4a9e77d4", "Requirements": [] }, "purrr": { "Package": "purrr", - "Version": "1.0.2", + "Version": "1.0.4", "Source": "Repository", "Repository": "CRAN", - "Hash": "1cba04a4e9414bdefc9dcaa99649a8dc", + "Hash": "cc8b5d43f90551fa6df0a6be5d640a4f", "Requirements": [ "cli", "lifecycle", @@ -1437,17 +1304,10 @@ }, "ragg": { "Package": "ragg", - "Version": "1.3.2", - "Source": "CRAN", + "Version": "1.3.3", + "Source": "Repository", "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "ragg", - "RemoteRef": "ragg", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.3.2", - "Hash": "e3087db406e079a8a2fd87f413918ed3", + "Hash": "0595fe5e47357111f29ad19101c7d271", "Requirements": [ "systemfonts", "textshaping" @@ -1455,17 +1315,17 @@ }, "randomForest": { "Package": "randomForest", - "Version": "4.7-1.1", + "Version": "4.7-1.2", "Source": "Repository", "Repository": "CRAN", - "Hash": "b52825075358b1ebd159e262bf40649d", + "Hash": "72e840ba2949bbeb517f7a1ae04cf56c", "Requirements": [] }, "rappdirs": { "Package": "rappdirs", "Version": "0.3.3", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "5e3c5dc0b071b21fa128676560dbe94d", "Requirements": [] }, @@ -1494,7 +1354,7 @@ "Package": "readr", "Version": "2.1.5", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "9de96463d2117f6ac49980577939dfb3", "Requirements": [ "R6", @@ -1512,17 +1372,10 @@ }, "readxl": { "Package": "readxl", - "Version": "1.4.3", - "Source": "CRAN", + "Version": "1.4.5", + "Source": "Repository", "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "readxl", - "RemoteRef": "readxl", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.4.3", - "Hash": "8cf9c239b96df1bbb133b74aef77ad0a", + "Hash": "18948de59f05d38a44d3e5065a76b4b6", "Requirements": [ "cellranger", "cpp11", @@ -1533,30 +1386,16 @@ "rematch": { "Package": "rematch", "Version": "2.0.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "rematch", - "RemoteRef": "rematch", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.0.0", + "Source": "Repository", + "Repository": "CRAN", "Hash": "cbff1b666c6fa6d21202f07e2318d4f1", "Requirements": [] }, "rematch2": { "Package": "rematch2", "Version": "2.1.2", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "rematch2", - "RemoteRef": "rematch2", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.1.2", + "Source": "Repository", + "Repository": "CRAN", "Hash": "76c9e04c712a05848ae7a23d2f170a40", "Requirements": [ "tibble" @@ -1581,15 +1420,8 @@ "reprex": { "Package": "reprex", "Version": "2.1.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "reprex", - "RemoteRef": "reprex", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.1.1", + "Source": "Repository", + "Repository": "CRAN", "Hash": "97b1d5361a24d9fb588db7afe3e5bcbf", "Requirements": [ "callr", @@ -1607,18 +1439,18 @@ }, "rlang": { "Package": "rlang", - "Version": "1.1.4", + "Version": "1.1.5", "Source": "Repository", "Repository": "CRAN", - "Hash": "3eec01f8b1dee337674b2e34ab1f9bc1", + "Hash": "724dcc1490cd7071ee75ca2994a5446e", "Requirements": [] }, "rmarkdown": { "Package": "rmarkdown", - "Version": "2.27", + "Version": "2.29", "Source": "Repository", "Repository": "CRAN", - "Hash": "27f9502e1cdbfa195f94e03b0f517484", + "Hash": "df99277f63d01c34e95e3d2f06a79736", "Requirements": [ "bslib", "evaluate", @@ -1659,7 +1491,7 @@ "Package": "rprojroot", "Version": "2.0.4", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "4c8415e0ec1e29f3f4f6fc108bef0144", "Requirements": [] }, @@ -1673,10 +1505,10 @@ }, "rstudioapi": { "Package": "rstudioapi", - "Version": "0.16.0", + "Version": "0.17.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "96710351d642b70e8f02ddeb237c46a7", + "Hash": "5f90cd73946d706cfe26024294236113", "Requirements": [] }, "rversions": { @@ -1693,15 +1525,8 @@ "rvest": { "Package": "rvest", "Version": "1.0.4", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "rvest", - "RemoteRef": "rvest", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.0.4", + "Source": "Repository", + "Repository": "CRAN", "Hash": "0bcf0c6f274e90ea314b812a6d19a519", "Requirements": [ "cli", @@ -1719,7 +1544,7 @@ "Package": "sass", "Version": "0.4.9", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "d53dbfddf695303ea4ad66f86e99b95d", "Requirements": [ "R6", @@ -1732,15 +1557,8 @@ "scales": { "Package": "scales", "Version": "1.3.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "scales", - "RemoteRef": "scales", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.3.0", + "Source": "Repository", + "Repository": "RSPM", "Hash": "c19df082ba346b0ffa6f833e92de34d1", "Requirements": [ "R6", @@ -1757,10 +1575,10 @@ }, "scam": { "Package": "scam", - "Version": "1.2-17", + "Version": "1.2-18", "Source": "Repository", "Repository": "CRAN", - "Hash": "f42bd2a6b0dfa362b8f267a925bac4db", + "Hash": "6668c65e940ff3893c194e48d57422dd", "Requirements": [ "Matrix", "mgcv" @@ -1769,15 +1587,8 @@ "selectr": { "Package": "selectr", "Version": "0.4-2", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "selectr", - "RemoteRef": "selectr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.4-2", + "Source": "Repository", + "Repository": "CRAN", "Hash": "3838071b66e0c566d55cc26bd6e27bf4", "Requirements": [ "R6", @@ -1786,20 +1597,20 @@ }, "sessioninfo": { "Package": "sessioninfo", - "Version": "1.2.2", + "Version": "1.2.3", "Source": "Repository", "Repository": "CRAN", - "Hash": "3f9796a8d0a0e8c6eb49a4b029359d1f", + "Hash": "bf169c6e52cdbded916e448dc1254913", "Requirements": [ "cli" ] }, "shiny": { "Package": "shiny", - "Version": "1.9.1", + "Version": "1.10.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "6a293995a66e12c48d13aa1f957d09c7", + "Hash": "4b4477baa9a939c5577e5ddb4bf01f28", "Requirements": [ "R6", "bslib", @@ -1822,6 +1633,40 @@ "xtable" ] }, + "shinyFeedback": { + "Package": "shinyFeedback", + "Version": "0.4.0", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "88a6b7ff3d135195ad0011fec04336f2", + "Requirements": [ + "fontawesome", + "htmltools", + "jsonlite", + "shiny" + ] + }, + "showtext": { + "Package": "showtext", + "Version": "0.9-7", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "ebc23fc796c28737ffe0a64e5404f3d1", + "Requirements": [ + "showtextdb", + "sysfonts" + ] + }, + "showtextdb": { + "Package": "showtextdb", + "Version": "3.0", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "c12e756cf947e58b0f2c2a520521a5a8", + "Requirements": [ + "sysfonts" + ] + }, "sourcetools": { "Package": "sourcetools", "Version": "0.1.7-1", @@ -1834,7 +1679,7 @@ "Package": "stringi", "Version": "1.8.4", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "39e1144fd75428983dc3f63aa53dfa91", "Requirements": [] }, @@ -1842,7 +1687,7 @@ "Package": "stringr", "Version": "1.5.1", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "960e2ae9e09656611e0b8214ad543207", "Requirements": [ "cli", @@ -1856,36 +1701,38 @@ }, "sys": { "Package": "sys", - "Version": "3.4.2", + "Version": "3.4.3", "Source": "Repository", "Repository": "CRAN", - "Hash": "3a1be13d68d47a8cd0bfd74739ca1555", + "Hash": "de342ebfebdbf40477d0758d05426646", + "Requirements": [] + }, + "sysfonts": { + "Package": "sysfonts", + "Version": "0.8.9", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "7dfca1e9c5c278300b5ca6a1772072f7", "Requirements": [] }, "systemfonts": { "Package": "systemfonts", - "Version": "1.1.0", - "Source": "CRAN", + "Version": "1.2.1", + "Source": "Repository", "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "systemfonts", - "RemoteRef": "systemfonts", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.1.0", - "Hash": "213b6b8ed5afbf934843e6c3b090d418", + "Hash": "f8b2924480a2679e2bad9750646112fe", "Requirements": [ "cpp11", + "jsonlite", "lifecycle" ] }, "testthat": { "Package": "testthat", - "Version": "3.2.1.1", + "Version": "3.2.3", "Source": "Repository", "Repository": "CRAN", - "Hash": "3f6e7e5e2220856ff865e4834766bf2b", + "Hash": "42f889439ccb14c55fc3d75c9c755056", "Requirements": [ "R6", "brio", @@ -1908,20 +1755,14 @@ }, "textshaping": { "Package": "textshaping", - "Version": "0.4.0", - "Source": "CRAN", + "Version": "1.0.0", + "Source": "Repository", "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "textshaping", - "RemoteRef": "textshaping", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.4.0", - "Hash": "5142f8bc78ed3d819d26461b641627ce", + "Hash": "5d44adc8145c718066b0bc374d142ca1", "Requirements": [ "cpp11", "lifecycle", + "stringi", "systemfonts" ] }, @@ -1929,7 +1770,7 @@ "Package": "tibble", "Version": "3.2.1", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "a84e2cc86d07289b3b6f5069df7a004c", "Requirements": [ "fansi", @@ -1944,15 +1785,8 @@ "tidyr": { "Package": "tidyr", "Version": "1.3.1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "tidyr", - "RemoteRef": "tidyr", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.3.1", + "Source": "Repository", + "Repository": "RSPM", "Hash": "915fb7ce036c22a6a33b5a8adb712eb1", "Requirements": [ "cli", @@ -1973,7 +1807,7 @@ "Package": "tidyselect", "Version": "1.2.1", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "829f27b9c4919c16b593794a6344d6c0", "Requirements": [ "cli", @@ -1987,15 +1821,8 @@ "tidyverse": { "Package": "tidyverse", "Version": "2.0.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "tidyverse", - "RemoteRef": "tidyverse", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "2.0.0", + "Source": "Repository", + "Repository": "CRAN", "Hash": "c328568cd14ea89a83bd4ca7f54ae07e", "Requirements": [ "broom", @@ -2033,15 +1860,8 @@ "timechange": { "Package": "timechange", "Version": "0.3.0", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "timechange", - "RemoteRef": "timechange", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.3.0", + "Source": "Repository", + "Repository": "CRAN", "Hash": "c5f3c201b931cd6474d17d8700ccb1c8", "Requirements": [ "cpp11" @@ -2049,20 +1869,20 @@ }, "tinytex": { "Package": "tinytex", - "Version": "0.51", + "Version": "0.56", "Source": "Repository", "Repository": "CRAN", - "Hash": "d44e2fcd2e4e076f0aac540208559d1d", + "Hash": "68e6032b8c16f33fab8756e40a0dca1a", "Requirements": [ "xfun" ] }, "tzdb": { "Package": "tzdb", - "Version": "0.4.0", + "Version": "0.5.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "f561504ec2897f4d46f0c7657e488ae1", + "Hash": "09e3961e87b7bafa4a9340bbb34aeda8", "Requirements": [ "cpp11" ] @@ -2081,10 +1901,10 @@ }, "usethis": { "Package": "usethis", - "Version": "2.2.3", + "Version": "3.1.0", "Source": "Repository", "Repository": "CRAN", - "Hash": "d524fd42c517035027f866064417d7e6", + "Hash": "0d7f5ca181f9b1e68b217bd93b6cc703", "Requirements": [ "cli", "clipr", @@ -2111,22 +1931,15 @@ "Package": "utf8", "Version": "1.2.4", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "62b65c52671e6665f803ff02954446e9", "Requirements": [] }, "uuid": { "Package": "uuid", "Version": "1.2-1", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "uuid", - "RemoteRef": "uuid", - "RemoteRepos": "https://cran.rstudio.com", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.2-1", + "Source": "Repository", + "Repository": "CRAN", "Hash": "34e965e62a41fcafb1ca60e9b142085b", "Requirements": [] }, @@ -2134,7 +1947,7 @@ "Package": "vctrs", "Version": "0.6.5", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "c03fa420630029418f7e6da3667aac4a", "Requirements": [ "cli", @@ -2158,15 +1971,8 @@ "viridisLite": { "Package": "viridisLite", "Version": "0.4.2", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "viridisLite", - "RemoteRef": "viridisLite", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "0.4.2", + "Source": "Repository", + "Repository": "RSPM", "Hash": "c826c7c4241b6fc89ff55aaea3fa7491", "Requirements": [] }, @@ -2174,7 +1980,7 @@ "Package": "vroom", "Version": "1.6.5", "Source": "Repository", - "Repository": "CRAN", + "Repository": "RSPM", "Hash": "390f9315bc0025be03012054103d227c", "Requirements": [ "bit64", @@ -2195,18 +2001,15 @@ }, "waldo": { "Package": "waldo", - "Version": "0.5.2", + "Version": "0.6.1", "Source": "Repository", "Repository": "CRAN", - "Hash": "c7d3fd6d29ab077cbac8f0e2751449e6", + "Hash": "52f574062a7b66e56926988c3fbdb3b7", "Requirements": [ "cli", "diffobj", - "fansi", "glue", - "rematch2", - "rlang", - "tibble" + "rlang" ] }, "whisker": { @@ -2219,33 +2022,26 @@ }, "withr": { "Package": "withr", - "Version": "3.0.0", + "Version": "3.0.2", "Source": "Repository", "Repository": "CRAN", - "Hash": "d31b6c62c10dcf11ec530ca6b0dd5d35", + "Hash": "cc2d62c76458d425210d1eb1478b30b4", "Requirements": [] }, "xfun": { "Package": "xfun", - "Version": "0.45", + "Version": "0.51", "Source": "Repository", "Repository": "CRAN", - "Hash": "ca59c87fe305b16a9141a5874c3a7889", + "Hash": "e1a3c06389a46d065c18bd4bbc27c64c", "Requirements": [] }, "xml2": { "Package": "xml2", - "Version": "1.3.6", - "Source": "CRAN", - "Repository": "CRAN", - "RemoteType": "standard", - "RemotePkgRef": "xml2", - "RemoteRef": "xml2", - "RemoteRepos": "https://cloud.r-project.org", - "RemoteReposName": "CRAN", - "RemotePkgPlatform": "x86_64-w64-mingw32", - "RemoteSha": "1.3.6", - "Hash": "1d0336142f4cd25d8d23cd3ba7a8fb61", + "Version": "1.3.8", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "f5130b2f3d461964bac93cc618013231", "Requirements": [ "cli", "rlang" @@ -2271,18 +2067,31 @@ }, "yaml": { "Package": "yaml", - "Version": "2.3.9", + "Version": "2.3.10", "Source": "Repository", "Repository": "CRAN", - "Hash": "9cb28d11799d93c953f852083d55ee9e", + "Hash": "51dab85c6c98e50a18d7551e9d49f76c", "Requirements": [] }, + "yulab.utils": { + "Package": "yulab.utils", + "Version": "0.2.0", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "6298953be4b60e23b75cf48c9bf9b0a2", + "Requirements": [ + "cli", + "digest", + "fs", + "rlang" + ] + }, "zip": { "Package": "zip", - "Version": "2.3.1", + "Version": "2.3.2", "Source": "Repository", "Repository": "CRAN", - "Hash": "fcc4bd8e6da2d2011eb64a5e5cc685ab", + "Hash": "2f2ac1424654714391fe94dd69e196a9", "Requirements": [] } }