Commit 357d2d1
1565 Adding VoxelMorph tutorial on OASIS dataset (#1566)
Fixes #1565.
### Description
Added VoxelMorph tutorial on Learn2Reg 2021 Task 3 (OASIS dataset).
### Checks
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Avoid including large-size files in the PR.
- [x] Clean up long text outputs from code cells in the notebook.
- [x] For security purposes, please check the contents and remove any
sensitive info such as user names and private key.
- [x] Ensure (1) hyperlinks and markdown anchors are working (2) use
relative paths for tutorial repo files (3) put figure and graphs in the
`./figure` folder
- [x] Notebook runs automatically `./runner.sh -t <path to .ipynb
file>`. Execution takes ~2 mins, output of `runner.sh` below:
```
Executing: 100%|████████████████████████████████████████████████████████████████████| 37/37 [02:19<00:00, 3.76s/cell]
/home/kaibo/miniforge3/envs/tutorial/lib/python3.8/site-packages/papermill/iorw.py:153: UserWarning: the file is not specified with any extension : -
warnings.warn(
real 2m19.352s
user 5m54.674s
sys 5m3.732s
Testing finished. All 1 executed tests passed!
```
---------
Signed-off-by: kaibo <ktang@unc.edu>
Co-authored-by: pre-commit-ci[bot] <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Co-authored-by: YunLiu <55491388+KumoLiu@users.noreply.github.com>1 parent 5c06db8 commit 357d2d1
File tree
2 files changed
+1006
-0
lines changed- 3d_registration
2 files changed
+1006
-0
lines changedLines changed: 1003 additions & 0 deletions
Large diffs are not rendered by default.
| Original file line number | Diff line number | Diff line change | |
|---|---|---|---|
| |||
118 | 118 | | |
119 | 119 | | |
120 | 120 | | |
| 121 | + | |
| 122 | + | |
| 123 | + | |
121 | 124 | | |
122 | 125 | | |
123 | 126 | | |
| |||
0 commit comments