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So much for #3 being closed-- still seeing problems on test cases like...
./lorenz --tfinal=1000 --every=1 --seed=1 | cut -f 4 | ./arsel -s | cut -s '-d ' -f 2-
Compare the above results (showing NaN T0) with that of --every=2. The weird thing is that it doesn't seem to be a problem now with the amount of data (try --tfinal=1500 --every=2 which doubles the data from the above case and contains roughly the same number of points as --tfinal=1000 --every=1). The problem genuinely seems to be the high resolution data.