Snakemake enhancement tracking issue

[SamStudio8]

Just a place to track changes to Snakemake:

Merged

• Fix minor bug causing multiple inputs to be collapsed to the first

Upstream Review

• Move parsing of command prefix and suffix to command runtime, allowing prefix and suffix to contain variables to be filled

Polishing

• Real-time job benchmarking (currently duplicates a lot of benchmark.py)
• GPU benchmarking (currently duplicates a lot of benchmark.py)

Todo

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