Not a Matrix Market file. Missing banner

[Thomas-Ulrich]

I m trying to install seissol@1.3.1 with the latest software stack of supermuc NG.

 spack install -j 40 seissol convergence_order=4 dr_quad_rule=dunavant equations=elastic precision=single %oneapi@2025.2.0  ^easi +python

Everything works well until:

==> Installing seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg [58/58]
==> No binary for seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg found: installing from source
==> Using cached archive: /dss/dsshome1/0A/di73yeq4/user_spack/cache/_source-cache/git//SeisSol/SeisSol.git/9d35b989749d031132c8820b45b003ecc00e985a.tar.gz
==> Warning: Using download cache instead of version control
  The required sources are normally checked out from a version control system, but have been archived in download cache: file:///dss/dsshome1/0A/di73yeq4/user_spack/cache/_source-cache/git//SeisSol/SeisSol.git/9d35b989749d031132c8820b45b003ecc00e985a.tar.gz. Spack lacks a tree hash to verify the integrity of this archive. Make sure your download cache is in a secure location.
==> No patches needed for seissol
==> seissol: Executing phase: 'cmake'
==> seissol: Executing phase: 'build'
==> Error: ProcessError: Command exited with status 2:
    '/dss/lrzsys/sys/spack/release/sles15.3/24.5.0/opt/skylake_avx512/gmake/4.4.1-gcc-td6dody/bin/make' '-j40'

3 errors found in build log:
     165      File "/hppfs/scratch/0A/di73yeq4/tmp/build_stage/spack-stage-seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg/spack-src/generated_code/yateto/codegen/gemm/gemmgen.py", line 231, in _callGenerator
     166        raise RuntimeError(f"""GEMM code generator executable "{self._cmd}" failed. Thus, the kernel generation may be incomplete.
     167    RuntimeError: GEMM code generator executable "/hppfs/work/pn49ha/di73yeq4/user_spack24.5/linux-sles15-skylake_avx512/py-pspamm/develop-oneapi-2025.2.0-a73d4mw/pspamm.py" failed. Thus, the kernel gen
            eration may be incomplete.
     168    Given command: /hppfs/work/pn49ha/di73yeq4/user_spack24.5/linux-sles15-skylake_avx512/py-pspamm/develop-oneapi-2025.2.0-a73d4mw/pspamm.py 16 9 9 32 0 16 1 0 --arch skx --prefetching pfsigonly --outp
            ut_funcname pspammsparse_33f3061583206b1313c415ced24e4498_m16_n9_k9_ldA32_ldB0_ldC16_alpha1_beta0_alignedA1_alignedC1_transAFalse_transBFalse_pfsigonly --output_filename /hppfs/scratch/0A/di73yeq4/t
            mp/build_stage/spack-stage-seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg/spack-build-3citu4z/src/generated_code/equation-elastic-4-single/subroutine.cpp --precision S --mtx_filename /hppfs/scratch/
            0A/di73yeq4/tmp/tmpfwo8txk3
     169    Stdout: None
     170    Stderr: None
  >> 171    make[2]: *** [CMakeFiles/SeisSol-codegen.dir/build.make:99: src/generated_code/subroutine.h] Error 1
     172    make[2]: Leaving directory '/hppfs/scratch/0A/di73yeq4/tmp/build_stage/spack-stage-seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg/spack-build-3citu4z'
  >> 173    make[1]: *** [CMakeFiles/Makefile2:143: CMakeFiles/SeisSol-codegen.dir/all] Error 2
     174    make[1]: Leaving directory '/hppfs/scratch/0A/di73yeq4/tmp/build_stage/spack-stage-seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg/spack-build-3citu4z'
  >> 175    make: *** [Makefile:139: all] Error 2

See build log for details:
  /hppfs/scratch/0A/di73yeq4/tmp/build_stage/spack-stage-seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg/spack-build-out.txt

The command that fails is the following:

di73yeq4@login04:~> /hppfs/work/pn49ha/di73yeq4/user_spack24.5/linux-sles15-skylake_avx512/py-pspamm/develop-oneapi-2025.2.0-a73d4mw/pspamm.py 16 9 9 32 0 16 1 0 --arch skx --prefetching pfsigonly --output_funcname pspammsparse_33f3061583206b1313c415ced24e4498_m16_n9_k9_ldA32_ldB0_ldC16_alpha1_beta0_alignedA1_alignedC1_transAFalse_transBFalse_pfsigonly --output_filename /hppfs/scratch/0A/di73yeq4/tmp/build_stage/spack-stage-seissol-1.3.1-3citu4zpo2duvwcw3w4nlypuo63r5cfg/spack-build-3citu4z/src/generated_code/equation-elastic-4-single/subroutine.cpp --precision S --mtx_filename /hppfs/scratch/0A/di73yeq4/tmp/tmpfwo8txk3

Traceback (most recent call last):
  File "/hppfs/work/pn49ha/di73yeq4/user_spack24.5/linux-sles15-skylake_avx512/py-pspamm/develop-oneapi-2025.2.0-a73d4mw/pspamm.py", line 5, in <module>
    pspamm.cli.main()
  File "/hppfs/work/pn49ha/di73yeq4/user_spack24.5/linux-sles15-skylake_avx512/py-pspamm/develop-oneapi-2025.2.0-a73d4mw/pspamm/cli.py", line 68, in main
    alg = MatMul(**args.__dict__)
  File "/hppfs/work/pn49ha/di73yeq4/user_spack24.5/linux-sles15-skylake_avx512/py-pspamm/develop-oneapi-2025.2.0-a73d4mw/pspamm/matmul.py", line 207, in __init__
    bpattern = Matrix.load(bmtx_filename)
  File "/hppfs/work/pn49ha/di73yeq4/user_spack24.5/linux-sles15-skylake_avx512/py-pspamm/develop-oneapi-2025.2.0-a73d4mw/pspamm/cursors/matrix.py", line 87, in load
    m = mmread(filename)
  File "/lrz/sys/spack/release/sles15.3/24.5.0/views/python/3.10.12-extended/lib/python3.10/site-packages/scipy/io/_fast_matrix_market/__init__.py", line 354, in mmread
    cursor, stream_to_close = _get_read_cursor(source)
  File "/lrz/sys/spack/release/sles15.3/24.5.0/views/python/3.10.12-extended/lib/python3.10/site-packages/scipy/io/_fast_matrix_market/__init__.py", line 197, in _get_read_cursor
    return _fmm_core.open_read_file(path, parallelism), ret_stream_to_close
ValueError: Line 1: Not a Matrix Market file. Missing banner.

Should I give a try to the branch 0.3.1?

[davschneller]

Ad hoc, that seems like a scipy issue; though Yateto should normally print that header.