DESCRIPTION

Package: SLTCGA
Type: Package
Title: Multi-Omics Analysis Toolkit for TCGA Cancer Database
Version: 1.0.0
Authors@R: person("Zaoqu", "Liu", email = "liuzaoqu@163.com", role = c("aut", "cre"))
Description: Comprehensive R package for systematic analysis of multi-omics data from 
    The Cancer Genome Atlas (TCGA). Implements 17 analytical scenarios covering correlation 
    analysis, pathway enrichment, and survival analysis across 8 omics layers including 
    transcriptomics, genomics, epigenomics, microRNA, clinical data, molecular signatures,
    and immune cell infiltration. Supports 33 main cancer types plus 32 molecular subtypes.
License: GPL (>= 3)
Encoding: UTF-8
Depends: R (>= 4.0.0)
Imports: dplyr, ggplot2, survival, patchwork, tidyr, rlang, igraph,
        ggraph, fgsea, limma, ComplexHeatmap, geneset,
        genekitr2, qs, jsonlite, parallel,
        ggnewscale, ggrepel, scales, circlize, methods, grid
Suggests: testthat (>= 3.0.0), knitr, rmarkdown
LazyData: true
RoxygenNote: 7.3.3
NeedsCompilation: no
Packaged: 2026-03-13 13:31:28 UTC; liuzaoqu
Author: Zaoqu Liu [aut, cre]
Maintainer: Zaoqu Liu <liuzaoqu@163.com>