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Bump prefix-dev/setup-pixi from 0.8.5 to 0.8.8 #92

Bump prefix-dev/setup-pixi from 0.8.5 to 0.8.8

Bump prefix-dev/setup-pixi from 0.8.5 to 0.8.8 #92

Workflow file for this run

name: Continuous Integration
on:
pull_request:
paths-ignore:
- .github/*
- .gitignore
- README.md
jobs:
ci_linux-64:
name: linux-64 CI
runs-on: ubuntu-latest
env:
CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
strategy:
fail-fast: false
matrix:
environment: ["r43", "r44"]
steps:
- name: Checkout pull request branch
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Create TOML from recipe
run: .github/workflows/create_toml_from_yaml.sh ${GITHUB_WORKSPACE}
- name: Setup pixi
uses: prefix-dev/setup-pixi@v0.8.8
- name: Run unit tests
run: pixi run --environment ${{ matrix.environment }} devtools_test
- name: Run R CMD CHECK
run: |
pixi install --environment ${{ matrix.environment }}
ln -sf $(pwd)/.pixi/envs/default/lib/libhwasan.so.0 $(pwd)/.pixi/envs/default/lib/libhwasan.so
ln -sf $(pwd)/.pixi/envs/${{ matrix.environment }}/lib/libhwasan.so.0 $(pwd)/.pixi/envs/${{ matrix.environment }}/lib/libhwasan.so
pixi run --environment ${{ matrix.environment }} build
pixi run --environment ${{ matrix.environment }} rcmdcheck
- name: Check unit test code coverage
run: pixi run --environment ${{ matrix.environment }} codecov
ci_osx-64:
name: osx-64 CI
runs-on: macos-13
strategy:
fail-fast: false
matrix:
environment: ["r43", "r44"]
steps:
- name: Checkout pull request branch
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Create TOML from recipe
run: .github/workflows/create_toml_from_yaml.sh ${GITHUB_WORKSPACE}
- name: Setup pixi
uses: prefix-dev/setup-pixi@v0.8.8
- name: Run unit tests
run: pixi run --environment ${{ matrix.environment }} devtools_test
- name: Run R CMD CHECK
run: |
pixi run --environment ${{ matrix.environment }} build
pixi run --environment ${{ matrix.environment }} rcmdcheck
ci_osx-arm64:
name: osx-arm64 CI
runs-on: macos-14
strategy:
fail-fast: false
matrix:
environment: ["r43", "r44"]
steps:
- name: Checkout pull request branch
uses: actions/checkout@v4
with:
fetch-depth: 0
- name: Create TOML from recipe
run: .github/workflows/create_toml_from_yaml.sh ${GITHUB_WORKSPACE}
- name: Setup pixi
uses: prefix-dev/setup-pixi@v0.8.8
- name: Run unit tests
run: pixi run --environment ${{ matrix.environment }} devtools_test
- name: Run R CMD CHECK
run: |
pixi run --environment ${{ matrix.environment }} build
pixi run --environment ${{ matrix.environment }} rcmdcheck