From 95bf3cd1671e30aaafc6a51a3aad5c24f6d4e27d Mon Sep 17 00:00:00 2001 From: Daniel Nachun Date: Wed, 3 Sep 2025 19:55:14 -0700 Subject: [PATCH 1/5] fix coverage --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 987083c..1099a8d 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -1,7 +1,7 @@ name: Continuous Integration on: - pull_request: + pull_request_target: paths-ignore: - .github/* - .gitignore From aa8c5522ba150d9bc44461028f1d9f457b42e2b1 Mon Sep 17 00:00:00 2001 From: Daniel Nachun Date: Wed, 3 Sep 2025 19:57:59 -0700 Subject: [PATCH 2/5] fix coverage --- R/qval.R | 1 + 1 file changed, 1 insertion(+) diff --git a/R/qval.R b/R/qval.R index f8cedd4..7602fbb 100644 --- a/R/qval.R +++ b/R/qval.R @@ -1,4 +1,5 @@ # +# #' These functions calculate the q-values corresponding to a given set of p-values, directly copy without modification from https://github.com/StoreyLab/qvalue. #' It is implemented under the LGPL license (https://github.com/StoreyLab/qvalue/blob/master/DESCRIPTION) #' The functions are marked as internal, meaning it is not meant to be exported for external use. From d5473cce6760ce3ea8c007d9260ddbefc241dbc1 Mon Sep 17 00:00:00 2001 From: Daniel Nachun Date: Wed, 3 Sep 2025 20:00:36 -0700 Subject: [PATCH 3/5] fix coverage --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 1099a8d..987083c 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -1,7 +1,7 @@ name: Continuous Integration on: - pull_request_target: + pull_request: paths-ignore: - .github/* - .gitignore From b54c49ef7b0efe836dec4ed8d4e09122640312e3 Mon Sep 17 00:00:00 2001 From: Daniel Nachun Date: Wed, 3 Sep 2025 20:01:39 -0700 Subject: [PATCH 4/5] fix coverage --- .github/workflows/ci.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/ci.yml b/.github/workflows/ci.yml index 987083c..1099a8d 100644 --- a/.github/workflows/ci.yml +++ b/.github/workflows/ci.yml @@ -1,7 +1,7 @@ name: Continuous Integration on: - pull_request: + pull_request_target: paths-ignore: - .github/* - .gitignore From dc7c3fdd63de3b68c68f85ce79b839f65331e7c6 Mon Sep 17 00:00:00 2001 From: Daniel Nachun Date: Wed, 3 Sep 2025 20:02:44 -0700 Subject: [PATCH 5/5] fix coverage --- R/qval.R | 1 - 1 file changed, 1 deletion(-) diff --git a/R/qval.R b/R/qval.R index 7602fbb..f8cedd4 100644 --- a/R/qval.R +++ b/R/qval.R @@ -1,5 +1,4 @@ # -# #' These functions calculate the q-values corresponding to a given set of p-values, directly copy without modification from https://github.com/StoreyLab/qvalue. #' It is implemented under the LGPL license (https://github.com/StoreyLab/qvalue/blob/master/DESCRIPTION) #' The functions are marked as internal, meaning it is not meant to be exported for external use.