r$> clusterProfiler:::kegg_list("all")
Reading KEGG annotation online: "https://rest.kegg.jp/list/all"...
fail to download KEGG data...
NULL
Warning message:
In download.file(url, method = method, ...) :
cannot open URL 'https://rest.kegg.jp/list/all': HTTP status was '400 Bad Request'
r$> clusterProfiler:::kegg_list()
Error in clusterProfiler:::kegg_list() :
argument "db" is missing, with no default
r$> clusterProfiler:::kegg_list
function (db, species = NULL)
{
if (db == "pathway") {
url <- paste("https://rest.kegg.jp/list", db, species,
sep = "/")
}
else {
url <- paste("https://rest.kegg.jp/list", db, sep = "/")
}
kegg_rest(url)
}
<bytecode: 0x560062430ac8>
<environment: namespace:clusterProfiler>