Skip to content

unable to install rseqR #3

@dimurali93

Description

@dimurali93

remotes::install_github("anilchalisey/rseqR")
Downloading GitHub repo anilchalisey/rseqR@HEAD
✓ checking for file ‘/private/var/folders/sg/6854jvkj0sj0_mjc_q9dw2pr0000gn/T/RtmpJP9kTN/remotesc4ef60b1fdce/anilchalisey-rseqR-6bec4ec/DESCRIPTION’ (470ms)
─ preparing ‘rseqR’:
✓ checking DESCRIPTION meta-information ...
─ checking for LF line-endings in source and make files and shell scripts
─ checking for empty or unneeded directories
─ building ‘rseqR_0.0.1.1.tar.gz’

Installing package into ‘/Users/divya/Downloads’
(as ‘lib’ is unspecified)

  • installing source package ‘rseqR’ ...
    ** using staged installation
    ** R
    Error in parse(outFile) :
    /private/var/folders/sg/6854jvkj0sj0_mjc_q9dw2pr0000gn/T/Rtmpi6PF53/R.INSTALLc6fd66ae3814/rseqR/R/pathway_analysis.R:76:12: unexpected '{'
    75: # if plotting then do so here - we plot the top 3 upregulated and downregulated
    76: if (plot {
    ^
    ERROR: unable to collate and parse R files for package ‘rseqR’
  • removing ‘/Users/divya/Downloads/rseqR’
    Warning message:
    In i.p(...) :
    installation of package ‘/var/folders/sg/6854jvkj0sj0_mjc_q9dw2pr0000gn/T//RtmpJP9kTN/filec4ef458e10fa/rseqR_0.0.1.1.tar.gz’ had non-zero exit status

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions