#!/usr/bin/env python3
import pykmertools as kt


def main() -> None:
    seq = (
        "ATGCGATATCGTAGGCGTCGATGGAGAGCTAGATCGATCGATCTAAATCCCGATCGATTCCGAGCGCGATCAAAGCGCGATAGGCTAGCTAAAGCTAGCA"
    )
    wsize = 31
    msize = 7

    print(f"sequence length = {len(seq)}")
    print(f"window size     = {wsize}")
    print(f"minimiser size  = {msize}")
    print()
    print("Minimiser segments:")

    mg = kt.MinimiserGenerator(seq, wsize, msize)
    for idx, (mmer, start, end) in enumerate(mg, start=1):
        mmer_str = mg.to_acgt(mmer)
        print(
            f"{idx:2d}. "
            f"min={mmer_str} ({mmer})  "
            f"range=[{start}, {end})  "
            f"segment={seq[start:end]}"
        )


if __name__ == "__main__":
    main()