diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 0000000..6567274 --- /dev/null +++ b/Dockerfile @@ -0,0 +1,14 @@ +FROM ubuntu:16.04 +LABEL MAINTAINER=sminot@fredhutch.org + +# Install prerequisites +RUN apt update && \ + apt-get install -y wget unzip python2.7 python-pip hmmer +RUN pip install tensorflow>=1.4.0 setproctitle + +# Add repository data +RUN mkdir /usr/local/rgn +ADD ./ /usr/local/rgn/ + +WORKDIR /usr/local/rgn/model/ +RUN python protling.py -h