From aee90a54623e7d1d3fc2f02183287601a85830af Mon Sep 17 00:00:00 2001 From: Sam Minot Date: Tue, 28 May 2019 15:31:34 -0700 Subject: [PATCH] Create Dockerfile --- Dockerfile | 14 ++++++++++++++ 1 file changed, 14 insertions(+) create mode 100644 Dockerfile diff --git a/Dockerfile b/Dockerfile new file mode 100644 index 0000000..6567274 --- /dev/null +++ b/Dockerfile @@ -0,0 +1,14 @@ +FROM ubuntu:16.04 +LABEL MAINTAINER=sminot@fredhutch.org + +# Install prerequisites +RUN apt update && \ + apt-get install -y wget unzip python2.7 python-pip hmmer +RUN pip install tensorflow>=1.4.0 setproctitle + +# Add repository data +RUN mkdir /usr/local/rgn +ADD ./ /usr/local/rgn/ + +WORKDIR /usr/local/rgn/model/ +RUN python protling.py -h