Running iBAQ on TMT dataset analysed using quantms fails

[adimadkaikar]

iBAQ fails due to the error "Error in peptides_to_protein after 0:00:02.872116: 'Condition'". I have done the following steps:

1. Re-analysed a TMT dataset using quantms
2. Run "qpxc convert quantms" on the mzTab file to obtain a "quantms.feature.parquet" file
3. Run "qpxc transform quantify --method ibaq" using the "quantms.feature.parquet" and "database.fasta" file

From what I understand, the ibaq module of mokume expects a peptides.parquet file containing a column named "Condition" and that column does not exist in the tmp_file "peptides.parquet"