feat(pipelines): update v4 rmc input

Author: rileyhgrant

data-pipeline/src/data_pipeline/pipelines/genes.py

@@ -321,7 +321,9 @@
     prepare_gnomad_regional_missense_constraint,
     f"/{constraint_subdir}/gnomad_v2_regional_missense_constraint.ht",
     {
-        "path": "gs://gcp-public-data--gnomad/release/2.1.1/regional_missense_constraint/gnomad_v2.1.1_rmc.ht",
+        # "path": "gs://gcp-public-data--gnomad/release/2.1.1/regional_missense_constraint/gnomad_v2.1.1_rmc.ht",
+        # "path": "gs://gcp-public-data--gnomad/release/2.1.1/regional_missense_constraint/gnomad_v2.1.1_rmc.ht",
+        "path": "gs://gnomad-v4-data-pipeline/inputs/secondary-analyses/constraint/2025-05-19_gnomad_v2_regional_missense_constraint.ht",
     },
 )
 
@@ -330,7 +332,8 @@
     prepare_gnomad_regional_missense_constraint,
     f"/{constraint_subdir}/gnomad_v4_regional_missense_constraint.ht",
     {
-        "path": "gs://gnomad-v4-data-pipeline/inputs/regional_missense_constraint/rmc_browser.ht",
+        # "path": "gs://gnomad-v4-data-pipeline/inputs/regional_missense_constraint/rmc_browser.ht",
+        "path": "gs://gnomad-v4-data-pipeline/inputs/secondary-analyses/constraint/2025-05-19_gnomad_v4_regional_missense_constraint.ht",
     },
 )
 
@@ -488,6 +491,7 @@ def annotate_with_constraint(genes_path, constraint_path):
     {
         "table_path": pipeline.get_task("annotate_grch38_genes_step_5"),
         "gnomad_regional_missense_constraint": pipeline.get_task("prepare_gnomad_v4_regional_missense_constraint"),
+        "gnomad_v2_regional_missense_constraint": pipeline.get_task("prepare_gnomad_v2_regional_missense_constraint"),
     },
     {"join_on": "preferred_transcript_id"},
 )