From cf4d4ef78c6dc26c3182644214ddcf396ec275db Mon Sep 17 00:00:00 2001
From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com>
Date: Tue, 27 Jan 2026 13:49:07 +0000
Subject: [PATCH 1/5] Initial plan


From 0ecac85d217dbfe2254d9d407eefbbce8e592899 Mon Sep 17 00:00:00 2001
From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com>
Date: Tue, 27 Jan 2026 13:57:49 +0000
Subject: [PATCH 2/5] Add deep cloning for opacities map in clone method

Co-authored-by: chengcli <69489965+chengcli@users.noreply.github.com>
---
 src/radiation/radiation_band.hpp | 7 +++++++
 1 file changed, 7 insertions(+)

diff --git a/src/radiation/radiation_band.hpp b/src/radiation/radiation_band.hpp
index fb05e03..3b868dc 100644
--- a/src/radiation/radiation_band.hpp
+++ b/src/radiation/radiation_band.hpp
@@ -75,6 +75,13 @@ struct RadiationBandOptionsImpl {
     if (op->toon() != nullptr) {
       op->toon() = op->toon()->clone();
     }
+    if (op->opacities().size() > 0) {
+      auto& opacities_ref = op->opacities();
+      opacities_ref.clear();
+      for (auto const& [k, v] : opacities()) {
+        opacities_ref[k] = v->clone();
+      }
+    }
     return op;
   }
   void report(std::ostream& os) const {

From 4bc769e912eccedee1d1ea7ed93e373a038e763a Mon Sep 17 00:00:00 2001
From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com>
Date: Tue, 27 Jan 2026 14:02:08 +0000
Subject: [PATCH 3/5] Final update: deep cloning implementation complete

Co-authored-by: chengcli <69489965+chengcli@users.noreply.github.com>
---
 _codeql_detected_source_root | 1 +
 1 file changed, 1 insertion(+)
 create mode 120000 _codeql_detected_source_root

diff --git a/_codeql_detected_source_root b/_codeql_detected_source_root
new file mode 120000
index 0000000..945c9b4
--- /dev/null
+++ b/_codeql_detected_source_root
@@ -0,0 +1 @@
+.
\ No newline at end of file

From f5305d5df834e60172d7bf5da08210d3b7a9ec91 Mon Sep 17 00:00:00 2001
From: "copilot-swe-agent[bot]" <198982749+Copilot@users.noreply.github.com>
Date: Tue, 27 Jan 2026 14:02:16 +0000
Subject: [PATCH 4/5] Remove CodeQL artifact file

Co-authored-by: chengcli <69489965+chengcli@users.noreply.github.com>
---
 _codeql_detected_source_root | 1 -
 1 file changed, 1 deletion(-)
 delete mode 120000 _codeql_detected_source_root

diff --git a/_codeql_detected_source_root b/_codeql_detected_source_root
deleted file mode 120000
index 945c9b4..0000000
--- a/_codeql_detected_source_root
+++ /dev/null
@@ -1 +0,0 @@
-.
\ No newline at end of file

From a1abd96c6cbc37614fec11d7394b10b576fad59c Mon Sep 17 00:00:00 2001
From: Cheng Li <69489965+chengcli@users.noreply.github.com>
Date: Tue, 27 Jan 2026 11:10:12 -0500
Subject: [PATCH 5/5] Update src/radiation/radiation_band.hpp

Co-authored-by: Copilot <175728472+Copilot@users.noreply.github.com>
---
 src/radiation/radiation_band.hpp | 10 ++++------
 1 file changed, 4 insertions(+), 6 deletions(-)

diff --git a/src/radiation/radiation_band.hpp b/src/radiation/radiation_band.hpp
index 3b868dc..142bde0 100644
--- a/src/radiation/radiation_band.hpp
+++ b/src/radiation/radiation_band.hpp
@@ -75,12 +75,10 @@ struct RadiationBandOptionsImpl {
     if (op->toon() != nullptr) {
       op->toon() = op->toon()->clone();
     }
-    if (op->opacities().size() > 0) {
-      auto& opacities_ref = op->opacities();
-      opacities_ref.clear();
-      for (auto const& [k, v] : opacities()) {
-        opacities_ref[k] = v->clone();
-      }
+    auto& opacities_ref = op->opacities();
+    opacities_ref.clear();
+    for (auto const& [k, v] : opacities()) {
+      opacities_ref[k] = v->clone();
     }
     return op;
   }