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Simulating the same number of subjects from the bosms3 dataset doesn't give the same number of transitions.
I wasn't expecting exactly the same numbers but these differences seem weird.
Here below you have an MRE: I used both tidy_sim.fmsm() (defined in #163) and just looked at number of first transitions.
Might this be related to #153?
### MRE sim.fmsm
library(tidyverse)
library(flexsurv)
blnorm <- flexsurvreg(Surv(years, status) ~ trans, data = bosms3,
dist = "lnorm")
tmat <- rbind(c(NA,1,2),c(NA,NA,3),c(NA,NA,NA))
set.seed(777)
invisible(rnorm(1e3))
sim_blnorm <- sim.fmsm(bexp, M = nrow(bosms3), t = max(bosms3$years),
trans = tmat)
sim_blnorm_tidy <-
sim_blnorm %>%
tidy_sim.fmsm()
bosms3 %>% count(status, trans)
# An object of class 'msdata'
#
# Data:
# status trans n
# 1 0 1 *101*
# 2 0 2 175
# 3 0 3 35
# 4 1 1 *103*
# 5 1 2 29
# 6 1 3 68
sim_blnorm_tidy %>% count(status, trans_num)
# # A tibble: 6 × 3
# status trans_num n
# <int> <dbl> <int>
# 1 0 1 *56*
# 2 0 2 56
# 3 0 3 81
# 4 1 1 *345*
# 5 1 2 110
# 6 1 3 264
sim_blnorm$st %>% as_tibble() %>% count(V1 == 1, V2 == 2)
# # A tibble: 2 × 3
# `V1 == 1` `V2 == 2` n
# <lgl> <lgl> <int>
# 1 TRUE FALSE 166
# 2 TRUE TRUE *345*Reactions are currently unavailable
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