From 678f19d852d5eda225c02b75f36efb16ea63974f Mon Sep 17 00:00:00 2001 From: William Giang <33235753+WillGiang@users.noreply.github.com> Date: Thu, 2 Mar 2023 14:12:10 -0500 Subject: [PATCH] Update plugins.config - Fix some typos - Changed white space for better readability --- src/main/resources/plugins.config | 264 +++++++++++++++--------------- 1 file changed, 132 insertions(+), 132 deletions(-) diff --git a/src/main/resources/plugins.config b/src/main/resources/plugins.config index 048abbad..9acb6d2e 100644 --- a/src/main/resources/plugins.config +++ b/src/main/resources/plugins.config @@ -19,9 +19,9 @@ Plugins>ImageJ on GPU (CLIJ2)>Binary, "Opening using box neighborh Plugins>ImageJ on GPU (CLIJ2)>Binary, "Opening using diamond neighborhood on GPU", net.haesleinhuepf.clij2.plugins.OpeningDiamond Plugins>ImageJ on GPU (CLIJ2)>Binary, "Closing using box neighborhood on GPU", net.haesleinhuepf.clij2.plugins.ClosingBox Plugins>ImageJ on GPU (CLIJ2)>Binary, "Closing using diamond neighborhood on GPU", net.haesleinhuepf.clij2.plugins.ClosingDiamond -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Fill Holes on GPU", net.haesleinhuepf.clij2.plugins.BinaryFillHoles -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Voronoi (Octagon) on GPU", net.haesleinhuepf.clij2.plugins.VoronoiOctagon -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Label Voronoi (Octagon) on GPU", net.haesleinhuepf.clij2.plugins.LabelVoronoiOctagon +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Fill Holes on GPU", net.haesleinhuepf.clij2.plugins.BinaryFillHoles +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Voronoi (Octagon) on GPU", net.haesleinhuepf.clij2.plugins.VoronoiOctagon +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Label Voronoi (Octagon) on GPU", net.haesleinhuepf.clij2.plugins.LabelVoronoiOctagon Plugins>ImageJ on GPU (CLIJ2)>Binary, "-", null Plugins>ImageJ on GPU (CLIJ2)>Binary, "Mask image on GPU", net.haesleinhuepf.clij2.plugins.Mask Plugins>ImageJ on GPU (CLIJ2)>Binary, "Mask an 3D image with a 2D mask on GPU", net.haesleinhuepf.clij2.plugins.MaskStackWithPlane @@ -39,12 +39,12 @@ Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if one pixels of one Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if one pixels of one image are smaller than pixels in another image pixel-wise on GPU", net.haesleinhuepf.clij2.plugins.Smaller Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if one pixels of one image are smaller than or equal to pixels in another image pixel-wise on GPU", net.haesleinhuepf.clij2.plugins.SmallerOrEqual Plugins>ImageJ on GPU (CLIJ2)>Binary, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are equal to a constant on GPU", net.haesleinhuepf.clij2.plugins.EqualConstant -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are not equal to a constant on GPU", net.haesleinhuepf.clij2.plugins.NotEqualConstant -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are greater than a constant on GPU", net.haesleinhuepf.clij2.plugins.GreaterConstant +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are equal to a constant on GPU", net.haesleinhuepf.clij2.plugins.EqualConstant +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are not equal to a constant on GPU", net.haesleinhuepf.clij2.plugins.NotEqualConstant +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are greater than a constant on GPU", net.haesleinhuepf.clij2.plugins.GreaterConstant Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are greater than or equal to a constant on GPU", net.haesleinhuepf.clij2.plugins.GreaterOrEqualConstant -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are smaller than a constant on GPU", net.haesleinhuepf.clij2.plugins.SmallerConstant -Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are are smaller than or equal to a constant on GPU", net.haesleinhuepf.clij2.plugins.SmallerOrEqualConstant +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are smaller than a constant on GPU", net.haesleinhuepf.clij2.plugins.SmallerConstant +Plugins>ImageJ on GPU (CLIJ2)>Binary, "Check if pixels are smaller than or equal to a constant on GPU", net.haesleinhuepf.clij2.plugins.SmallerOrEqualConstant Plugins>ImageJ on GPU (CLIJ2)>Binary, "-", null Plugins>ImageJ on GPU (CLIJ2)>Binary, "Distance map on GPU", net.haesleinhuepf.clij2.plugins.DistanceMap @@ -57,19 +57,19 @@ Plugins>ImageJ on GPU (CLIJ2)>Binary, "Similar", Plugins>ImageJ on GPU (CLIJ2)>Binary, "Different", net.haesleinhuepf.clij2.plugins.Different -Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw a box on GPU", net.haesleinhuepf.clij2.plugins.DrawBox +Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw a box on GPU", net.haesleinhuepf.clij2.plugins.DrawBox Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw a line on GPU", net.haesleinhuepf.clij2.plugins.DrawLine -Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw a sphere on GPU", net.haesleinhuepf.clij2.plugins.DrawSphere -Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw mesh from a pointlist and an index list on GPU", net.haesleinhuepf.clij2.plugins.PointIndexListToMesh -Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw a mesh from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.DistanceMatrixToMesh +Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw a sphere on GPU", net.haesleinhuepf.clij2.plugins.DrawSphere +Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw mesh from a pointlist and an index list on GPU", net.haesleinhuepf.clij2.plugins.PointIndexListToMesh +Plugins>ImageJ on GPU (CLIJ2)>Drawing, "Draw a mesh from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.DistanceMatrixToMesh Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect maxima in a 2D box on GPU", net.haesleinhuepf.clij2.plugins.DetectMaxima2DBox Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect maxima in a 3D box on GPU", net.haesleinhuepf.clij2.plugins.DetectMaxima3DBox -Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect maxima slice by slice in a box on GPU", net.haesleinhuepf.clij2.plugins.DetectMaximaSliceBySliceBox -Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect minima in a 2D box on GPU", net.haesleinhuepf.clij2.plugins.DetectMinima2DBox -Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect minima in a 3D box on GPU", net.haesleinhuepf.clij2.plugins.DetectMinima3DBox -Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect minima slice by slice in a box on GPU", net.haesleinhuepf.clij2.plugins.DetectMinimaSliceBySliceBox +Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect maxima slice by slice in a box on GPU", net.haesleinhuepf.clij2.plugins.DetectMaximaSliceBySliceBox +Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect minima in a 2D box on GPU", net.haesleinhuepf.clij2.plugins.DetectMinima2DBox +Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect minima in a 3D box on GPU", net.haesleinhuepf.clij2.plugins.DetectMinima3DBox +Plugins>ImageJ on GPU (CLIJ2)>Detection, "Detect minima slice by slice in a box on GPU", net.haesleinhuepf.clij2.plugins.DetectMinimaSliceBySliceBox @@ -89,14 +89,14 @@ Plugins>ImageJ on GPU (CLIJ2)>Filter, "Laplace (Box) on GPU", Plugins>ImageJ on GPU (CLIJ2)>Filter, "Laplace (Sphere) on GPU", net.haesleinhuepf.clij2.plugins.LaplaceDiamond Plugins>ImageJ on GPU (CLIJ2)>Filter, "Logarithm on GPU", net.haesleinhuepf.clij2.plugins.Logarithm Plugins>ImageJ on GPU (CLIJ2)>Filter, "Sobel on GPU", net.haesleinhuepf.clij2.plugins.Sobel -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Sobel slice by slice on GPU", net.haesleinhuepf.clij2.plugins.SobelSliceBySlice -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Tenengrad on GPU", net.haesleinhuepf.clij2.plugins.Tenengrad -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Tenengrad slice by slice on GPU", net.haesleinhuepf.clij2.plugins.TenengradSliceBySlice +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Sobel slice by slice on GPU", net.haesleinhuepf.clij2.plugins.SobelSliceBySlice +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Tenengrad on GPU", net.haesleinhuepf.clij2.plugins.Tenengrad +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Tenengrad slice by slice on GPU", net.haesleinhuepf.clij2.plugins.TenengradSliceBySlice Plugins>ImageJ on GPU (CLIJ2)>Filter, "Top-hat (Box) on GPU", net.haesleinhuepf.clij2.plugins.TopHatBox Plugins>ImageJ on GPU (CLIJ2)>Filter, "Top-hat (Sphere) on GPU", net.haesleinhuepf.clij2.plugins.TopHatSphere Plugins>ImageJ on GPU (CLIJ2)>Filter, "Flood fill (Diamond) on GPU", net.haesleinhuepf.clij2.plugins.FloodFillDiamond -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Subtract Gaussian Background", net.haesleinhuepf.clij2.plugins.SubtractGaussianBackground -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Divide by Gaussian Background", net.haesleinhuepf.clij2.plugins.DivideByGaussianBackground +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Subtract Gaussian Background", net.haesleinhuepf.clij2.plugins.SubtractGaussianBackground +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Divide by Gaussian Background", net.haesleinhuepf.clij2.plugins.DivideByGaussianBackground Plugins>ImageJ on GPU (CLIJ2)>Filter, "-", null Plugins>ImageJ on GPU (CLIJ2)>Filter, "Median 2D in a sphere on GPU", net.haesleinhuepf.clij2.plugins.Median2DSphere @@ -124,10 +124,10 @@ Plugins>ImageJ on GPU (CLIJ2)>Filter, "Maximum 3D in a sphere on G Plugins>ImageJ on GPU (CLIJ2)>Filter, "Maximum 3D in a box on GPU", net.haesleinhuepf.clij2.plugins.Maximum3DBox Plugins>ImageJ on GPU (CLIJ2)>Filter, "Maximum slice by slice in a sphere on GPU", net.haesleinhuepf.clij2.plugins.MaximumSliceBySliceSphere Plugins>ImageJ on GPU (CLIJ2)>Filter, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Standard deviation box on GPU", net.haesleinhuepf.clij2.plugins.StandardDeviationBox -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Standard deviation sphere on GPU", net.haesleinhuepf.clij2.plugins.StandardDeviationSphere -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Variance Box on GPU", net.haesleinhuepf.clij2.plugins.VarianceBox -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Variance Sphere on GPU", net.haesleinhuepf.clij2.plugins.VarianceSphere +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Standard deviation box on GPU", net.haesleinhuepf.clij2.plugins.StandardDeviationBox +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Standard deviation sphere on GPU", net.haesleinhuepf.clij2.plugins.StandardDeviationSphere +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Variance Box on GPU", net.haesleinhuepf.clij2.plugins.VarianceBox +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Variance Sphere on GPU", net.haesleinhuepf.clij2.plugins.VarianceSphere Plugins>ImageJ on GPU (CLIJ2)>Filter, "-", null Plugins>ImageJ on GPU (CLIJ2)>Filter, "Compute gradient in X on GPU", net.haesleinhuepf.clij2.plugins.GradientX @@ -137,18 +137,18 @@ Plugins>ImageJ on GPU (CLIJ2)>Filter, "-", Plugins>ImageJ on GPU (CLIJ2)>Filter, "Replace a specific intensity in image on GPU", net.haesleinhuepf.clij2.plugins.ReplaceIntensity Plugins>ImageJ on GPU (CLIJ2)>Filter, "Replace a list of intensities in an image on GPU", net.haesleinhuepf.clij2.plugins.ReplaceIntensities -Plugins>ImageJ on GPU (CLIJ2)>Filter, "Replace pixels in an image if they are zero on GPU", net.haesleinhuepf.clij2.plugins.ReplacePixelsIfZero +Plugins>ImageJ on GPU (CLIJ2)>Filter, "Replace pixels in an image if they are zero on GPU", net.haesleinhuepf.clij2.plugins.ReplacePixelsIfZero Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Mean value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MeanOfTouchingNeighbors -Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Median value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MedianOfTouchingNeighbors -Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Minimum value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MinimumOfTouchingNeighbors -Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Maximum value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MaximumOfTouchingNeighbors -Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Standard deviation value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.StandardDeviationOfTouchingNeighbors +Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Median value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MedianOfTouchingNeighbors +Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Minimum value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MinimumOfTouchingNeighbors +Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Maximum value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MaximumOfTouchingNeighbors +Plugins>ImageJ on GPU (CLIJ2)>Filter>Neighbors, "Standard deviation value of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.StandardDeviationOfTouchingNeighbors Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Create a 2D image on GPU", net.haesleinhuepf.clij2.plugins.Create2D Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Create a 3D image on GPU", net.haesleinhuepf.clij2.plugins.Create3D -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Convert an image to Unsigned Byte (8-bit) on GPU", net.haesleinhuepf.clij2.plugins.ConvertUInt8 -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Convert an image to Unsigned Short (16-bit) on GPU", net.haesleinhuepf.clij2.plugins.ConvertUInt16 +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Convert an image to Unsigned Byte (8-bit) on GPU", net.haesleinhuepf.clij2.plugins.ConvertUInt8 +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Convert an image to Unsigned Short (16-bit) on GPU", net.haesleinhuepf.clij2.plugins.ConvertUInt16 Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Convert an image to Float (32-bit) on GPU", net.haesleinhuepf.clij2.plugins.ConvertFloat Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Absolute of an image on GPU", net.haesleinhuepf.clij2.plugins.Absolute @@ -186,19 +186,19 @@ Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set all pixels to their Z-c Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set all pixels on image borders on GPU", net.haesleinhuepf.clij2.plugins.SetImageBorders Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set all pixels to random values on GPU", net.haesleinhuepf.clij2.plugins.SetRandom -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set all pixels nonzero pixels pixel index on GPU", net.haesleinhuepf.clij2.plugins.SetNonZeroPixelsToPixelIndex -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set pixels to value where X=Y to a value on GPU", net.haesleinhuepf.clij2.plugins.SetWhereXequalsY -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set all pixels all pixels with X>Y to a value on GPU", net.haesleinhuepf.clij2.plugins.SetWhereXgreaterThanY -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set all pixels all pixels with XImageJ on GPU (CLIJ2)>Image calculation, "Write values at coordinates on GPU", net.haesleinhuepf.clij2.plugins.WriteValuesToPositions +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set all nonzero pixels to pixel index on GPU", net.haesleinhuepf.clij2.plugins.SetNonZeroPixelsToPixelIndex +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set pixels where X=Y to a value on GPU", net.haesleinhuepf.clij2.plugins.SetWhereXequalsY +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set pixels where X>Y to a value on GPU", net.haesleinhuepf.clij2.plugins.SetWhereXgreaterThanY +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Set pixels where XImageJ on GPU (CLIJ2)>Image calculation, "Write values at coordinates on GPU", net.haesleinhuepf.clij2.plugins.WriteValuesToPositions -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Logarithm of image on GPU", net.haesleinhuepf.clij2.plugins.Logarithm -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Exponential of image on GPU", net.haesleinhuepf.clij2.plugins.Exponential -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Calculate one image to the power of another pixel-wise on GPU", net.haesleinhuepf.clij2.plugins.PowerImages +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Logarithm of image on GPU", net.haesleinhuepf.clij2.plugins.Logarithm +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Exponential of image on GPU", net.haesleinhuepf.clij2.plugins.Exponential +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Calculate one image to the power of another pixel-wise on GPU", net.haesleinhuepf.clij2.plugins.PowerImages -Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Equalize mean intensities of slices all on GPU", net.haesleinhuepf.clij2.plugins.EqualizeMeanIntensitiesOfSlices +Plugins>ImageJ on GPU (CLIJ2)>Image calculation, "Equalize mean intensities of slices all on GPU", net.haesleinhuepf.clij2.plugins.EqualizeMeanIntensitiesOfSlices -Plugins>ImageJ on GPU (CLIJ2)>IO, "Save image as TIF to disc from GPU", net.haesleinhuepf.clij2.plugins.SaveAsTIF +Plugins>ImageJ on GPU (CLIJ2)>IO, "Save image as TIF to disk from GPU", net.haesleinhuepf.clij2.plugins.SaveAsTIF Plugins>ImageJ on GPU (CLIJ2)>Measure, "Sum all pixels on GPU", net.haesleinhuepf.clij2.plugins.SumOfAllPixels Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean of all pixels on GPU", net.haesleinhuepf.clij2.plugins.MeanOfAllPixels @@ -217,45 +217,45 @@ Plugins>ImageJ on GPU (CLIJ2)>Measure, "Standard deviation of maske Plugins>ImageJ on GPU (CLIJ2)>Measure, "Variance of all on GPU", net.haesleinhuepf.clij2.plugins.VarianceOfAllPixels Plugins>ImageJ on GPU (CLIJ2)>Measure, "Variance of masked pixels on GPU", net.haesleinhuepf.clij2.plugins.VarianceOfMaskedPixels Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean of masked pixels on GPU", net.haesleinhuepf.clij2.plugins.MeanOfMaskedPixels -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean of pixels above a threshold on GPU", net.haesleinhuepf.clij2.plugins.MeanOfPixelsAboveThreshold +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean of pixels above a threshold on GPU", net.haesleinhuepf.clij2.plugins.MeanOfPixelsAboveThreshold Plugins>ImageJ on GPU (CLIJ2)>Measure, "Minimum of masked pixels on GPU", net.haesleinhuepf.clij2.plugins.MinimumOfMaskedPixels Plugins>ImageJ on GPU (CLIJ2)>Measure, "Maximum of masked pixels on GPU", net.haesleinhuepf.clij2.plugins.MaximumOfMaskedPixels -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Determine bounding box on GPU", net.haesleinhuepf.clij2.plugins.BoundingBox -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Determine centroids of labels on GPU", net.haesleinhuepf.clij2.plugins.CentroidsOfLabels -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Determine centroids of background and labels on GPU", net.haesleinhuepf.clij2.plugins.CentroidsOfBackgroundAndLabels.class +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Determine bounding box on GPU", net.haesleinhuepf.clij2.plugins.BoundingBox +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Determine centroids of labels on GPU", net.haesleinhuepf.clij2.plugins.CentroidsOfLabels +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Determine centroids of background and labels on GPU", net.haesleinhuepf.clij2.plugins.CentroidsOfBackgroundAndLabels.class Plugins>ImageJ on GPU (CLIJ2)>Measure, "Get size of image on GPU", net.haesleinhuepf.clij2.plugins.GetSize Plugins>ImageJ on GPU (CLIJ2)>Measure, "Count non-zero pixels on GPU", net.haesleinhuepf.clij2.plugins.CountNonZeroPixels -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Statistics of label map excluding background on GPU", net.haesleinhuepf.clij2.plugins.StatisticsOfLabelledPixels -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Statistics of label map including background on GPU", net.haesleinhuepf.clij2.plugins.StatisticsOfBackgroundAndLabelledPixels -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Statistics whole image on GPU", net.haesleinhuepf.clij2.plugins.StatisticsOfImage -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Sum all slices of an image stack on GPU", net.haesleinhuepf.clij2.plugins.SumImageSliceBySlice +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Statistics of label map excluding background on GPU", net.haesleinhuepf.clij2.plugins.StatisticsOfLabelledPixels +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Statistics of label map including background on GPU", net.haesleinhuepf.clij2.plugins.StatisticsOfBackgroundAndLabelledPixels +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Statistics whole image on GPU", net.haesleinhuepf.clij2.plugins.StatisticsOfImage +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Sum all slices of an image stack on GPU", net.haesleinhuepf.clij2.plugins.SumImageSliceBySlice -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Maximum Extension Map", net.haesleinhuepf.clij2.plugins.MaximumExtensionMap -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean Extension Map", net.haesleinhuepf.clij2.plugins.MeanExtensionMap -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Extension Ratio Map", net.haesleinhuepf.clij2.plugins.ExtensionRatioMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Maximum Extension Map", net.haesleinhuepf.clij2.plugins.MaximumExtensionMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean Extension Map", net.haesleinhuepf.clij2.plugins.MeanExtensionMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Extension Ratio Map", net.haesleinhuepf.clij2.plugins.ExtensionRatioMap -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Maximum Intensity Map", net.haesleinhuepf.clij2.plugins.MaximumIntensityMap -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Minimum Intensity Map", net.haesleinhuepf.clij2.plugins.MinimumIntensityMap -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean Intensity Map", net.haesleinhuepf.clij2.plugins.MeanIntensityMap -Plugins>ImageJ on GPU (CLIJ2)>Measure, "StandardDeviation Intensity Map", net.haesleinhuepf.clij2.plugins.StandardDeviationIntensityMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Maximum Intensity Map", net.haesleinhuepf.clij2.plugins.MaximumIntensityMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Minimum Intensity Map", net.haesleinhuepf.clij2.plugins.MinimumIntensityMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Mean Intensity Map", net.haesleinhuepf.clij2.plugins.MeanIntensityMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "StandardDeviation Intensity Map", net.haesleinhuepf.clij2.plugins.StandardDeviationIntensityMap -Plugins>ImageJ on GPU (CLIJ2)>Measure, "Label Overlap Count Map", net.haesleinhuepf.clij2.plugins.LabelOverlapCountMap +Plugins>ImageJ on GPU (CLIJ2)>Measure, "Label Overlap Count Map", net.haesleinhuepf.clij2.plugins.LabelOverlapCountMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate distance matrix from pointlists on GPU", net.haesleinhuepf.clij2.plugins.GenerateDistanceMatrix -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate touch matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateTouchMatrix -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "GenerateNNearestNeighborsMatrix", net.haesleinhuepf.clij2.plugins.GenerateNNearestNeighborsMatrix -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "GenerateProximalNeighborsMatrix", net.haesleinhuepf.clij2.plugins.GenerateProximalNeighborsMatrix +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate distance matrix from pointlists on GPU", net.haesleinhuepf.clij2.plugins.GenerateDistanceMatrix +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate touch matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateTouchMatrix +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "GenerateNNearestNeighborsMatrix", net.haesleinhuepf.clij2.plugins.GenerateNNearestNeighborsMatrix +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "GenerateProximalNeighborsMatrix", net.haesleinhuepf.clij2.plugins.GenerateProximalNeighborsMatrix -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate touch count matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateTouchCountMatrix -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate binary overlap matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateBinaryOverlapMatrix -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate Jaccard index matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateJaccardIndexMatrix +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate touch count matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateTouchCountMatrix +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate binary overlap matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateBinaryOverlapMatrix +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate Jaccard index matrix from label map on GPU", net.haesleinhuepf.clij2.plugins.GenerateJaccardIndexMatrix Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Mesh touching neighbors in label map", net.haesleinhuepf.clij2.plugins.DrawMeshBetweenTouchingLabels -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Mesh of distances between centroids of touching labels", net.haesleinhuepf.clij2.plugins.DrawDistanceMeshBetweenTouchingLabels -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Draw Mesh Between N Nearest Labels", net.haesleinhuepf.clij2.plugins.DrawMeshBetweenNNearestLabels +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Mesh of distances between centroids of touching labels", net.haesleinhuepf.clij2.plugins.DrawDistanceMeshBetweenTouchingLabels +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Draw Mesh Between N Nearest Labels", net.haesleinhuepf.clij2.plugins.DrawMeshBetweenNNearestLabels Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Draw Mesh Between Proximal Labels", net.haesleinhuepf.clij2.plugins.DrawMeshBetweenProximalLabels Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Average distance of n closest points from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.AverageDistanceOfNClosestPoints @@ -264,84 +264,84 @@ Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Average distance of touchin Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Determine shortest distances from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.ShortestDistances Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Count touching neighbors from touch matrix on GPU", net.haesleinhuepf.clij2.plugins.CountTouchingNeighbors -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Determine n shortest points from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.NClosestPoints -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Determine n shortest distances from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.NClosestDistances +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Determine n shortest points from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.NClosestPoints +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Determine n shortest distances from a distance matrix on GPU", net.haesleinhuepf.clij2.plugins.NClosestDistances -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate mesh from touch matrix on GPU", net.haesleinhuepf.clij2.plugins.TouchMatrixToMesh -Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Determine minimum distance of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MinimumDistanceOfTouchingNeighbors +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Generate mesh from touch matrix on GPU", net.haesleinhuepf.clij2.plugins.TouchMatrixToMesh +Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Determine minimum distance of touching neighbors on GPU", net.haesleinhuepf.clij2.plugins.MinimumDistanceOfTouchingNeighbors Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Convert touch matrix to adjacency matrix on GPU", net.haesleinhuepf.clij2.plugins.TouchMatrixToAdjacencyMatrix Plugins>ImageJ on GPU (CLIJ2)>Measure>Mesh, "Convert adjacency matrix to touch matrix on GPU", net.haesleinhuepf.clij2.plugins.AdjacencyMatrixToTouchMatrix Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Average Distance Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.AverageDistanceOfNClosestNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of average distances between label centroids", net.haesleinhuepf.clij2.plugins.AverageNeighborDistanceMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of touching neighbor count of labels", net.haesleinhuepf.clij2.plugins.TouchingNeighborCountMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of average distances between label centroids", net.haesleinhuepf.clij2.plugins.AverageNeighborDistanceMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of touching neighbor count of labels", net.haesleinhuepf.clij2.plugins.TouchingNeighborCountMap Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of mean intensities of labels", net.haesleinhuepf.clij2.plugins.LabelMeanIntensityMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of standard deviation of intensities of labels", net.haesleinhuepf.clij2.plugins.LabelStandardDeviationIntensityMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of pixel count of labels", net.haesleinhuepf.clij2.plugins.PixelCountMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Euclidean distance map of labelled pixels from label centroid", net.haesleinhuepf.clij2.plugins.EuclideanDistanceFromLabelCentroidMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of standard deviation of intensities of labels", net.haesleinhuepf.clij2.plugins.LabelStandardDeviationIntensityMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Map of pixel count of labels", net.haesleinhuepf.clij2.plugins.PixelCountMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Euclidean distance map of labelled pixels from label centroid", net.haesleinhuepf.clij2.plugins.EuclideanDistanceFromLabelCentroidMap Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Label Proximal Neighbor Count Map", net.haesleinhuepf.clij2.plugins.LabelProximalNeighborCountMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Neighbor Distance Range Ratio Map", net.haesleinhuepf.clij2.plugins.NeighborDistanceRangeRatioMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Distance Of Touching Neighbors", net.haesleinhuepf.clij2.plugins.MaximumDistanceOfTouchingNeighbors -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Neighbor Distance Map", net.haesleinhuepf.clij2.plugins.MaximumTouchingNeighborDistanceMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Neighbor Distance Map", net.haesleinhuepf.clij2.plugins.MinimumTouchingNeighborDistanceMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Neighbor Distance Range Ratio Map", net.haesleinhuepf.clij2.plugins.NeighborDistanceRangeRatioMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Distance Of Touching Neighbors", net.haesleinhuepf.clij2.plugins.MaximumDistanceOfTouchingNeighbors +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Neighbor Distance Map", net.haesleinhuepf.clij2.plugins.MaximumTouchingNeighborDistanceMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Neighbor Distance Map", net.haesleinhuepf.clij2.plugins.MinimumTouchingNeighborDistanceMap Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.MaximumOfNNearestNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.MaximumOfProximalNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.MaximumOfTouchingNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mean Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.MeanOfNNearestNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.MaximumOfNNearestNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.MaximumOfProximalNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Maximum Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.MaximumOfTouchingNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mean Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.MeanOfNNearestNeighborsMap Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mean Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.MeanOfProximalNeighborsMap Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mean Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.MeanOfTouchingNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.MinimumOfNNearestNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.MinimumOfProximalNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.MinimumOfTouchingNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mode Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.ModeOfNNearestNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mode Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.ModeOfProximalNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mode Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.ModeOfTouchingNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Standard Deviation Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.StandardDeviationOfNNearestNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Standard Deviation Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.StandardDeviationOfProximalNeighborsMap -Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Standard Deviation Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.StandardDeviationOfTouchingNeighborsMap - - -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "CLIJ2 ClInfo ", net.haesleinhuepf.clij2.plugins.ClInfo -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "CLIJ Debug on/off ", net.haesleinhuepf.clij.utilities.DebugToggle -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Clear GPU memory ", net.haesleinhuepf.clij2.plugins.Clear -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Release single image from GPU memory ", net.haesleinhuepf.clij2.plugins.Release -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Report about GPU memory usage ", net.haesleinhuepf.clij2.plugins.ReportMemory +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.MinimumOfNNearestNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.MinimumOfProximalNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Minimum Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.MinimumOfTouchingNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mode Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.ModeOfNNearestNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mode Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.ModeOfProximalNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Mode Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.ModeOfTouchingNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Standard Deviation Of N Nearest Neighbors Map", net.haesleinhuepf.clij2.plugins.StandardDeviationOfNNearestNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Standard Deviation Of Proximal Neighbors Map", net.haesleinhuepf.clij2.plugins.StandardDeviationOfProximalNeighborsMap +Plugins>ImageJ on GPU (CLIJ2)>Measure>Neighbor graph, "Standard Deviation Of Touching Neighbors Map", net.haesleinhuepf.clij2.plugins.StandardDeviationOfTouchingNeighborsMap + + +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "CLIJ2 ClInfo ", net.haesleinhuepf.clij2.plugins.ClInfo +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "CLIJ Debug on/off ", net.haesleinhuepf.clij.utilities.DebugToggle +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Clear GPU memory ", net.haesleinhuepf.clij2.plugins.Clear +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Release single image from GPU memory ", net.haesleinhuepf.clij2.plugins.Release +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Report about GPU memory usage ", net.haesleinhuepf.clij2.plugins.ReportMemory Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Search for commands on GPU ", net.haesleinhuepf.clij2.plugins.Help -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "List GPU properies ", net.haesleinhuepf.clij2.plugins.GPUProperties -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "List available GPUs ", net.haesleinhuepf.clij2.plugins.ListAvailableGPUs -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Invalidate kernel cache ", net.haesleinhuepf.clij2.plugins.InvalidateKernelCache -Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "CLIJ2 Legacy Macro Extensions", net.haesleinhuepf.clij2.legacy.CLIJLegacyMacroExtensions +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "List GPU properies ", net.haesleinhuepf.clij2.plugins.GPUProperties +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "List available GPUs ", net.haesleinhuepf.clij2.plugins.ListAvailableGPUs +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "Invalidate kernel cache ", net.haesleinhuepf.clij2.plugins.InvalidateKernelCache +Plugins>ImageJ on GPU (CLIJ2)>Macro tools, "CLIJ2 Legacy Macro Extensions", net.haesleinhuepf.clij2.legacy.CLIJLegacyMacroExtensions -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Connected components analysis/labeling (box) on GPU", net.haesleinhuepf.clij2.plugins.ConnectedComponentsLabelingBox -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Connected components analysis/labeling (diamond) on GPU", net.haesleinhuepf.clij2.plugins.ConnectedComponentsLabelingDiamond -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Label spots on GPU", net.haesleinhuepf.clij2.plugins.LabelSpots -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Masked Voronoi-Labeling on GPU", net.haesleinhuepf.clij2.plugins.MaskedVoronoiLabeling -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Voronoi-Otsu-Labeling on GPU", net.haesleinhuepf.clij2.plugins.VoronoiOtsuLabeling -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Mask a label in an image on GPU", net.haesleinhuepf.clij2.plugins.MaskLabel +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Connected components analysis/labeling (box) on GPU", net.haesleinhuepf.clij2.plugins.ConnectedComponentsLabelingBox +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Connected components analysis/labeling (diamond) on GPU", net.haesleinhuepf.clij2.plugins.ConnectedComponentsLabelingDiamond +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Label spots on GPU", net.haesleinhuepf.clij2.plugins.LabelSpots +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Masked Voronoi-Labeling on GPU", net.haesleinhuepf.clij2.plugins.MaskedVoronoiLabeling +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Voronoi-Otsu-Labeling on GPU", net.haesleinhuepf.clij2.plugins.VoronoiOtsuLabeling +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Mask a label in an image on GPU", net.haesleinhuepf.clij2.plugins.MaskLabel Plugins>ImageJ on GPU (CLIJ2)>Labeling, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Relabel labelmap to close index gaps on GPU", net.haesleinhuepf.clij2.plugins.CloseIndexGapsInLabelMap +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Relabel labelmap to close index gaps on GPU", net.haesleinhuepf.clij2.plugins.CloseIndexGapsInLabelMap -Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Dilate labels", net.haesleinhuepf.clij2.plugins.DilateLabels -Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Erode Labels on GPU", net.haesleinhuepf.clij2.plugins.ErodeLabels -Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Merge touching labels on GPU", net.haesleinhuepf.clij2.plugins.MergeTouchingLabels +Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Dilate labels", net.haesleinhuepf.clij2.plugins.DilateLabels +Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Erode Labels on GPU", net.haesleinhuepf.clij2.plugins.ErodeLabels +Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Merge touching labels on GPU", net.haesleinhuepf.clij2.plugins.MergeTouchingLabels Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels with values out of range on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabelsWithValuesOutOfRange -Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels with values within range on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabelsWithValuesWithinRange -Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels outside size range", net.haesleinhuepf.clij2.plugins.ExcludeLabelsOutsideSizeRange +Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels with values out of range on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabelsWithValuesOutOfRange +Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels with values within range on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabelsWithValuesWithinRange +Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels outside size range", net.haesleinhuepf.clij2.plugins.ExcludeLabelsOutsideSizeRange Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels touching image edges on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabelsOnEdges -Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Label surface", net.haesleinhuepf.clij2.plugins.LabelSurface +Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Label surface", net.haesleinhuepf.clij2.plugins.LabelSurface Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels on surface on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabelsOnSurface Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude sub-surface labels on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabelsSubSurface Plugins>ImageJ on GPU (CLIJ2)>Labeling>Processing, "Exclude labels on GPU", net.haesleinhuepf.clij2.plugins.ExcludeLabels @@ -356,8 +356,8 @@ Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Spots image to pointlist on Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Pointlist to label spots image on GPU", net.haesleinhuepf.clij2.plugins.PointlistToLabelledSpots -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Reduce labels to centroids", net.haesleinhuepf.clij2.plugins.ReduceLabelsToCentroids -Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Reduce Labels To Label Edges on GPU", net.haesleinhuepf.clij2.plugins.ReduceLabelsToLabelEdges +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Reduce labels to centroids", net.haesleinhuepf.clij2.plugins.ReduceLabelsToCentroids +Plugins>ImageJ on GPU (CLIJ2)>Labeling, "Reduce Labels To Label Edges on GPU", net.haesleinhuepf.clij2.plugins.ReduceLabelsToLabelEdges Plugins>ImageJ on GPU (CLIJ2)>Table, "Convert 2D image to a table on GPU", net.haesleinhuepf.clij2.plugins.PullToResultsTable Plugins>ImageJ on GPU (CLIJ2)>Table, "Convert a table to a 2D image on GPU", net.haesleinhuepf.clij2.plugins.PushResultsTable @@ -425,9 +425,9 @@ Plugins>ImageJ on GPU (CLIJ2)>Transform, "Transpose in XY on GPU" Plugins>ImageJ on GPU (CLIJ2)>Transform, "Transpose in XZ on GPU", net.haesleinhuepf.clij2.plugins.TransposeXZ Plugins>ImageJ on GPU (CLIJ2)>Transform, "Transpose in YZ on GPU", net.haesleinhuepf.clij2.plugins.TransposeYZ Plugins>ImageJ on GPU (CLIJ2)>Transform, "Resample image on GPU", net.haesleinhuepf.clij2.plugins.Resample -Plugins>ImageJ on GPU (CLIJ2)>Transform, "Make isotropic on GPU", net.haesleinhuepf.clij2.plugins.MakeIsotropic -Plugins>ImageJ on GPU (CLIJ2)>Transform, "Rigid transform on GPU", net.haesleinhuepf.clij2.plugins.RigidTransform -Plugins>ImageJ on GPU (CLIJ2)>Transform, "Sphere transform on GPU", net.haesleinhuepf.clij2.plugins.SphereTransform +Plugins>ImageJ on GPU (CLIJ2)>Transform, "Make isotropic on GPU", net.haesleinhuepf.clij2.plugins.MakeIsotropic +Plugins>ImageJ on GPU (CLIJ2)>Transform, "Rigid transform on GPU", net.haesleinhuepf.clij2.plugins.RigidTransform +Plugins>ImageJ on GPU (CLIJ2)>Transform, "Sphere transform on GPU", net.haesleinhuepf.clij2.plugins.SphereTransform Plugins>ImageJ on GPU (CLIJ2)>Transform, "Image to stack on GPU", net.haesleinhuepf.clij2.plugins.ImageToStack Plugins>ImageJ on GPU (CLIJ2)>Transform, "Concatenate two image stacks on GPU", net.haesleinhuepf.clij2.plugins.ConcatenateStacks Plugins>ImageJ on GPU (CLIJ2)>Transform, "Combine two images or stacks horizontally on GPU", net.haesleinhuepf.clij2.plugins.CombineHorizontally @@ -461,17 +461,17 @@ Plugins>ImageJ on GPU (CLIJ2)>Projections, "Maximum-Z-projection (thres Plugins>ImageJ on GPU (CLIJ2)>Projections, "Mean-Z-projection (bounded) on GPU", net.haesleinhuepf.clij2.plugins.MeanZProjectionBounded Plugins>ImageJ on GPU (CLIJ2)>Projections, "Median-Z-Projection Masked", net.haesleinhuepf.clij2.plugins.MedianZProjectionMasked Plugins>ImageJ on GPU (CLIJ2)>Projections, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Extended Depth Of Focus Sobel Projection on GPU", net.haesleinhuepf.clij2.plugins.ExtendedDepthOfFocusSobelProjection -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Extended Depth Of Focus Tenengrad Projection on GPU", net.haesleinhuepf.clij2.plugins.ExtendedDepthOfFocusTenengradProjection -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Extended Depth Of Focus Variance Projection on GPU", net.haesleinhuepf.clij2.plugins.ExtendedDepthOfFocusVarianceProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Extended Depth Of Focus Sobel Projection on GPU", net.haesleinhuepf.clij2.plugins.ExtendedDepthOfFocusSobelProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Extended Depth Of Focus Tenengrad Projection on GPU", net.haesleinhuepf.clij2.plugins.ExtendedDepthOfFocusTenengradProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Extended Depth Of Focus Variance Projection on GPU", net.haesleinhuepf.clij2.plugins.ExtendedDepthOfFocusVarianceProjection Plugins>ImageJ on GPU (CLIJ2)>Projections, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Projections, "ArgMaximum-Z-projection on GPU", net.haesleinhuepf.clij2.plugins.ArgMaximumZProjection -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Of Maximum-Z-Projection", net.haesleinhuepf.clij2.plugins.ZPositionOfMaximumZProjection -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Of Minimum-Z-Projection", net.haesleinhuepf.clij2.plugins.ZPositionOfMinimumZProjection -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Projection", net.haesleinhuepf.clij2.plugins.ZPositionProjection -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Range-Projection", net.haesleinhuepf.clij2.plugins.ZPositionRangeProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "ArgMaximum-Z-projection on GPU", net.haesleinhuepf.clij2.plugins.ArgMaximumZProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Of Maximum-Z-Projection", net.haesleinhuepf.clij2.plugins.ZPositionOfMaximumZProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Of Minimum-Z-Projection", net.haesleinhuepf.clij2.plugins.ZPositionOfMinimumZProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Projection", net.haesleinhuepf.clij2.plugins.ZPositionProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Z-Position Range-Projection", net.haesleinhuepf.clij2.plugins.ZPositionRangeProjection Plugins>ImageJ on GPU (CLIJ2)>Projections, "-", null -Plugins>ImageJ on GPU (CLIJ2)>Projections, "Depth color projection on GPU", net.haesleinhuepf.clij2.plugins.DepthColorProjection +Plugins>ImageJ on GPU (CLIJ2)>Projections, "Depth color projection on GPU", net.haesleinhuepf.clij2.plugins.DepthColorProjection Plugins>ImageJ on GPU (CLIJ2), "How to cite CLIJ2", net.haesleinhuepf.clij.macro.documentation.OnlineDocumentationOpener("https://www.nature.com/articles/s41592-019-0650-1") Plugins>ImageJ on GPU (CLIJ2), "CLIJ2 Online help", net.haesleinhuepf.clij.macro.documentation.OnlineDocumentationOpener("https://clij.github.io/")