Merge pull request #1361 from cmu-delphi/influenza_na_values

Remove N/A Values for MA at state level

Author: krivard

hhs_hosp/delphi_hhs/run.py

@@ -117,6 +117,11 @@ def run_module(params):
             df=pop_proportion(df, geo_mapper)
         df = make_geo(df, geo, geo_mapper)
         df = smooth_values(df, smoother[0])
+        # Fix N/A MA values, see issue #1360
+        if geo == "state" and sensor.startswith(CONFIRMED_FLU):
+            ma_filter = df.val.isna() & (df.geo_id == "ma") & (df.timestamp > "08-01-2021") & \
+                (df.timestamp.dt.day_name() == "Tuesday")
+            df = df[~ma_filter]
         if df.empty:
             continue
         sensor_name = sensor + smoother[1]