Merge pull request #702 from cmu-delphi/release/delphi-epidata-0.2.12

Release Delphi Epidata 0.2.12

Author: krivard

.bumpversion.cfg

@@ -1,5 +1,5 @@
 [bumpversion]
-current_version = 0.2.11
+current_version = 0.2.12
 commit = False
 tag = False
 

docs/api/covidcast-signals/hhs.md

@@ -33,7 +33,9 @@ sum is used as the "ground truth" for hospitalizations by the [COVID-19 Forecast
 | Signal | 7-day average signal | Geography | Resolution | Description |
 | --- | --- | --- | --- | --- |
 | `confirmed_admissions_covid_1d` | `confirmed_admissions_covid_1d_7dav`| state | 1 day | Sum of adult and pediatric confirmed COVID-19 hospital admissions occurring each day. <br/> **Earliest date available:** 2019-12-31 |
+| `confirmed_admissions_covid_1d_prop` | `confirmed_admissions_covid_1d_prop_7dav`| state | 1 day | Sum of adult and pediatric confirmed COVID-19 hospital admissions occurring each day, per 100,000 population. <br/> **Earliest date available:** 2019-12-31 |
 | `sum_confirmed_suspected_admissions_covid_1d` | `sum_confirmed_suspected_admissions_covid_1d_7dav` | state | 1 day | Sum of adult and pediatric confirmed and suspected COVID-19 hospital admissions occurring each day. <br/> **Earliest date available:** 2019-12-31 |
+| `sum_confirmed_suspected_admissions_covid_1d_prop` | `sum_confirmed_suspected_admissions_covid_1d_prop_7dav` | state | 1 day | Sum of adult and pediatric confirmed and suspected COVID-19 hospital admissions occurring each day, per 100,000 population. <br/> **Earliest date available:** 2019-12-31 |
 
 The 7-day average signals are computed by Delphi by calculating
 moving averages of the preceding 7 days, so e.g. the signal for June 7 is the

docs/new_endpoint_tutorial.md

@@ -12,7 +12,7 @@ In this tutorial we'll create a brand new endpoint for the Epidata API:
 `fluview_meta`. At a high level, we'll do the following steps:
 
 1. understand the data that we want to surface
-2. add the new endpoint to `api.php`
+2. add the new endpoint to the API server
 3. add the new endpoint to the various client libraries
 4. write an integration test for the new endpoint
 5. update API documentation for the new endpoint
@@ -328,8 +328,7 @@ actual
 [pull request for the `fluview_meta` endpoint](https://github.com/cmu-delphi/delphi-epidata/pull/93)
 created in this tutorial.
 
-Once it's approved, commit the code. Within a short amount of time (usually ~30
-seconds), the API will begin serving your new endpoint. Go ahead and give it a
+Once it's approved, merge the PR, and contact an admin to schedule a release. Once released, the API will begin serving your new endpoint. Go ahead and give it a
 try: https://delphi.cmu.edu/epidata/fluview_meta/
 
 ```

src/client/delphi_epidata.R

@@ -15,7 +15,7 @@ Epidata <- (function() {
   # API base url
   BASE_URL <- 'https://delphi.cmu.edu/epidata/api.php'
 
-  client_version <- '0.2.11'
+  client_version <- '0.2.12'
 
   # Helper function to cast values and/or ranges to strings
   .listitem <- function(value) {

src/client/delphi_epidata.js

@@ -22,7 +22,7 @@
   }
 })(this, function (exports, fetchImpl, jQuery) {
   const BASE_URL = "https://delphi.cmu.edu/epidata/";
-  const client_version = "0.2.11";
+  const client_version = "0.2.12";
 
   // Helper function to cast values and/or ranges to strings
   function _listitem(value) {

src/client/packaging/npm/package.json

@@ -2,7 +2,7 @@
   "name": "delphi_epidata",
   "description": "Delphi Epidata API Client",
   "authors": "Delphi Group",
-  "version": "0.2.11",
+  "version": "0.2.12",
   "license": "MIT",
   "homepage": "https://github.com/cmu-delphi/delphi-epidata",
   "bugs": {

src/client/packaging/pypi/delphi_epidata/__init__.py

@@ -1,4 +1,4 @@
 from .delphi_epidata import Epidata
 
 name = 'delphi_epidata'
-__version__ = '0.2.11'
+__version__ = '0.2.12'

src/client/packaging/pypi/setup.py

@@ -5,7 +5,7 @@
 
 setuptools.setup(
     name="delphi_epidata",
-    version="0.2.11",
+    version="0.2.12",
     author="David Farrow",
     author_email="dfarrow0@gmail.com",
     description="A programmatic interface to Delphi's Epidata API.",

src/server/_config.py

@@ -5,7 +5,7 @@
 
 load_dotenv()
 
-VERSION = "0.2.11"
+VERSION = "0.2.12"
 
 MAX_RESULTS = int(10e6)
 MAX_COMPATIBILITY_RESULTS = int(3650)

src/server/endpoints/covidcast_utils/db_signals.csv

@@ -290,9 +290,13 @@ google-symptoms,anosmia_raw_search,TRUE,anosmia_smoothed_search,TRUE,{base_name}
 google-symptoms,sum_anosmia_ageusia_raw_search,FALSE,sum_anosmia_ageusia_raw_search,FALSE,Sum Anosmia Ageusia Searches,TRUE,"The sum of Google search volume for anosmia and ageusia related searches, in arbitrary units that are normalized for overall search users",,day,Date,Value,raw,public,bad,FALSE,FALSE,FALSE,FALSE,FALSE,
 google-symptoms,sum_anosmia_ageusia_raw_search,TRUE,sum_anosmia_ageusia_smoothed_search,TRUE,{base_name} (7-day average),TRUE,,,day,Date,Value,raw,public,bad,TRUE,FALSE,FALSE,FALSE,FALSE,
 hhs,confirmed_admissions_covid_1d,FALSE,confirmed_admissions_covid_1d,FALSE,Confirmed COVID-19 Admissions per day,TRUE,Sum of adult and pediatric confirmed COVID-19 hospital admissions occurring each day. ,,day,Date,Value,count,late,bad,FALSE,FALSE,FALSE,FALSE,FALSE,
+hhs,confirmed_admissions_covid_1d,TRUE,confirmed_admissions_covid_1d_prop,FALSE,{base_name} (per 100k people),TRUE,,,day,Date,Value,per100k,late,bad,FALSE,FALSE,FALSE,FALSE,FALSE,
 hhs,confirmed_admissions_covid_1d,,confirmed_admissions_covid_1d_7dav,TRUE,{base_name} (7-day average),TRUE,,,day,Date,Value,count,late,bad,TRUE,FALSE,FALSE,FALSE,FALSE,
+hhs,confirmed_admissions_covid_1d,,confirmed_admissions_covid_1d_prop_7dav,FALSE,"{base_name} (7-day average, per 100k people)",TRUE,,,day,Date,Value,per100k,late,bad,TRUE,FALSE,FALSE,FALSE,FALSE,
 hhs,sum_confirmed_suspected_admissions_covid_1d,FALSE,sum_confirmed_suspected_admissions_covid_1d,FALSE,Confirmed and Suspected COVID-19 Admissions per day,TRUE,Sum of adult and pediatric confirmed and suspected COVID-19 hospital admissions occurring each day. ,,day,Date,Value,count,late,bad,FALSE,FALSE,FALSE,FALSE,FALSE,
+hhs,sum_confirmed_suspected_admissions_covid_1d,TRUE,sum_confirmed_suspected_admissions_covid_1d_prop,FALSE,{base_name} (per 100k people),TRUE,,,day,Date,Value,per100k,late,bad,FALSE,FALSE,FALSE,FALSE,FALSE,
 hhs,sum_confirmed_suspected_admissions_covid_1d,,sum_confirmed_suspected_admissions_covid_1d_7dav,TRUE,{base_name} (7-day average),TRUE,,,day,Date,Value,count,late,bad,TRUE,FALSE,FALSE,FALSE,FALSE,
+hhs,sum_confirmed_suspected_admissions_covid_1d,,sum_confirmed_suspected_admissions_covid_1d_prop_7dav,FALSE,"{base_name} (7-day average, per 100k people)",TRUE,,,day,Date,Value,per100k,late,bad,TRUE,FALSE,FALSE,FALSE,FALSE,
 hospital-admissions,smoothed_covid19,FALSE,smoothed_covid19,FALSE,COVID-19 Admissions (EMR and Claims),FALSE,Estimated percentage of new hospital admissions with COVID-associated diagnoses,"{short_description}, based on counts of electronic medical records and claims from health system partners, smoothed in time using a Gaussian linear smoother. 
 
 Discontinued October 1, 2020.",day,Date,Value,percent,late,bad,TRUE,FALSE,FALSE,FALSE,FALSE,