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doc: build readme
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README.md

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@@ -14,35 +14,35 @@ forecasting.
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`{epiprocess}` contains:
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- `epi_df()` and `epi_archive()`, two data frame classes (that work like
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a `{tibble}` with `{dplyr}` verbs) for working with epidemiological
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time series data
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- `epi_df` is for working with a snapshot of data at a single point in
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time
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- `epi_archive` is for working with histories of data that changes
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over time
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- one of the most common uses of `epi_archive` is for accurate
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backtesting of forecasting models, see
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`vignette("backtesting", package="epipredict")`
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- signal processing tools building on these data structures such as
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- `epi_slide()` for sliding window operations (aids with feature
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creation)
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- `epix_slide()` for sliding window operations on archives (aids with
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backtesting)
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- `growth_rate()` for computing growth rates
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- `detect_outlr()` for outlier detection
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- `epi_cor()` for computing correlations
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- `epi_df()` and `epi_archive()`, two data frame classes (that work
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like a `{tibble}` with `{dplyr}` verbs) for working with
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epidemiological time series data
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- `epi_df` is for working with a snapshot of data at a single
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point in time
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- `epi_archive` is for working with histories of data that changes
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over time
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- one of the most common uses of `epi_archive` is for accurate
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backtesting of forecasting models, see `vignette("backtesting",
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package="epipredict")`
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- signal processing tools building on these data structures such as
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- `epi_slide()` for sliding window operations (aids with feature
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creation)
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- `epix_slide()` for sliding window operations on archives (aids
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with backtesting)
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- `growth_rate()` for computing growth rates
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- `detect_outlr()` for outlier detection
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- `epi_cor()` for computing correlations
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If you are new to this set of tools, you may be interested learning
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through a book format: [Introduction to Epidemiological
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Forecasting](https://cmu-delphi.github.io/delphi-tooling-book/).
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You may also be interested in:
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- `{epidatr}`, for accessing wide range of epidemiological data sets,
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including COVID-19 data, flu data, and more.
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- [rtestim](https://github.com/dajmcdon/rtestim), a package for
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estimating the time-varying reproduction number of an epidemic.
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- `{epidatr}`, for accessing wide range of epidemiological data sets,
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including COVID-19 data, flu data, and more.
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- [rtestim](https://github.com/dajmcdon/rtestim), a package for
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estimating the time-varying reproduction number of an epidemic.
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This package is provided by the [Delphi group](https://delphi.cmu.edu/)
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at Carnegie Mellon University.
@@ -117,7 +117,7 @@ edf
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#> * geo_type = state
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#> * time_type = day
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#> * as_of = 2024-01-01
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#>
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#>
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#> # A tibble: 2,808 × 4
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#> geo_value time_value cases_cumulative cases_daily
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#> * <chr> <date> <dbl> <dbl>
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#> * geo_type = state
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#> * time_type = day
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#> * as_of = 2024-01-01
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#>
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#>
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#> # A tibble: 2,808 × 5
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#> geo_value time_value cases_cumulative cases_daily smoothed_cases_daily
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#> * <chr> <date> <dbl> <dbl> <dbl>
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#> 1 ca 2020-03-01 19 19 19
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#> 2 ca 2020-03-02 23 4 11.5
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#> 1 ca 2020-03-01 19 19 19
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#> 2 ca 2020-03-02 23 4 11.5
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#> 3 ca 2020-03-03 29 6 9.67
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#> 4 ca 2020-03-04 40 11 10
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#> 5 ca 2020-03-05 50 10 10
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#> 6 ca 2020-03-06 68 18 11.3
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#> 4 ca 2020-03-04 40 11 10
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#> 5 ca 2020-03-05 50 10 10
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#> 6 ca 2020-03-06 68 18 11.3
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#> # ℹ 2,802 more rows
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```
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