diff --git a/README.md b/README.md index 4fa2c54..d3b5aef 100644 --- a/README.md +++ b/README.md @@ -176,6 +176,7 @@ supremo|1.0.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/supremo:1.0.0 sv2|latest|docker pull pgc-images.sbgenomics.com/d3b-bixu/sv2:latest svaba|1.1.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/svaba:1.1.0 SVTyper|0.7.1|docker pull pgc-images.sbgenomics.com/d3b-bixu/svtyper:0.7.1 +SWANS|v2.1.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/swans:v2.1.0 t1k|v1.0.2|docker pull pgc-images.sbgenomics.com/d3b-bixu/t1k:v1.0.2 t1k|v1.0.5|docker pull pgc-images.sbgenomics.com/d3b-bixu/t1k:v1.0.5 THetA2|0.7.0|docker pull pgc-images.sbgenomics.com/d3b-bixu/theta2:0.7.0 diff --git a/SWANS/v2.1.0/Dockerfile b/SWANS/v2.1.0/Dockerfile new file mode 100644 index 0000000..ee7dcc3 --- /dev/null +++ b/SWANS/v2.1.0/Dockerfile @@ -0,0 +1,15 @@ +ARG PLATFORM=linux/amd64 + +FROM --platform=${PLATFORM} francothyroidlab/pond:1.2 +LABEL maintainer="Miguel Brown " +LABEL description="Single-entity Workflow ANalysiS Pipeline (SWANS)" + +ENV SWANS_VERSION=2.1.0 +ENV PATH="$PATH:/SWANS/src/scripts" + + +WORKDIR /SWANS + +RUN curl -L https://github.com/FrancoResearchLab/SWANS/archive/refs/tags/v${SWANS_VERSION}.tar.gz | tar -xz --strip-components=1 +WORKDIR / +COPY Dockerfile . \ No newline at end of file