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lines changed Original file line number Diff line number Diff line change @@ -639,39 +639,6 @@ def yield_unit_waveforms():
639639 self .UnitElectrode .insert (unit_electrode_waveforms , ignore_extra_fields = True )
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642- # ----------- Quality Control ----------
643-
644-
645- @schema
646- class QualityControl (dj .Imported ):
647- definition = """ # Quality control metrics for a set of CuratedClustering
648- -> CuratedClustering
649- """
650-
651- class ClusterQualityMetrics (dj .Part ):
652- definition = """ # Quality metrics for each cluster
653- -> master
654- -> CuratedClustering.Unit
655- ---
656- amp: float
657- snr: float
658- isi_violation: float
659- firing_rate: float
660- presence_ratio: float # Fraction of epoch in which spikes are present
661- amplitude_cutoff: float # Estimate of miss rate based on amplitude histogram
662- isolation_distance=null: float # Distance to nearest cluster in Mahalanobis space
663- l_ratio=null: float #
664- d_prime=null: float # Classification accuracy based on LDA
665- nn_hit_rate=null: float #
666- nn_miss_rate=null: float
667- silhouette_score=null: float # Standard metric for cluster overlap
668- max_drift=null: float # Maximum change in spike depth throughout recording
669- cumulative_drift=null: float # Cumulative change in spike depth throughout recording
670- """
671-
672- def make (self , key ):
673- pass
674-
675642# ---------------- HELPER FUNCTIONS ----------------
676643
677644
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