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DESCRIPTION
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Package: RWRtoolkit
Title: Random Walk with Restart Tool Suite
Version: 0.2.0
Authors@R:
c(person(given = "David",
family = "Kainer",
role = c("aut", "cre"),
email = "david.kainer@ornl.gov",
comment = c(ORCID = "0000-0001-7271-4676")),
person(given = "Mikaela",
family = "Cashman McDevitt",
role = c("aut"),
email = "cashmanmm@ornl.gov",
comment = c(ORCID = "0000-0003-0620-7830")),
person(given = "John",
family = "Miller",
role = c("aut"),
email = "millerji@ornl.gov",
comment = c(ORCID = "0000-0002-6114-5401")),
person(given = "Kyle",
family = "Sullivan",
role = c("aut"),
email = "sullivanka@ornl.gov",
comment = c(ORCID = "0000-0002-4621-5598")),
person(given = "Matthew",
family = "Lane",
role = c("aut"),
email = "lanemj@ornl.gov",
comment = c(ORCID = "0000-0002-7750-6822")))
Description: This package is a tool suite that utilizes Random Walk with Restart.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.2
Depends:
R (>= 4.1.0),
Imports:
igraph (>= 1.2.5),
tidyverse,
BiocManager,
data.table,
doParallel,
foreach,
optparse,
patchwork,
remotes,
iterators,
dplyr,
RandomWalkRestartMH,
stringr,
Matrix
Suggests:
RCy3,
testthat,
mockery,
gprofiler2,
ggbreak,
knitr,
rmarkdown,
RColorBrewer
Remotes:
github::dkainer/RandomWalkRestartMH,
bioc::RCy3
VignetteBuilder: knitr