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Possible mismatch in header concerning target/query reference #29

@emersonlds

Description

@emersonlds

Isn't this swapped?

[in https://github.com/freeseek/score/blob/master/liftover.c, lines 837-842]

liftover_target_reference x src_ref_fname
if (src_ref_fname)
bcf_hdr_printf(out, "##liftover_target_reference=%s",
strrchr(src_ref_fname, '/') ? strrchr(src_ref_fname, '/') + 1 : src_ref_fname);

liftover_query_reference x dst_ref_fname
if (dst_ref_fname)
bcf_hdr_printf(out, "##liftover_query_reference=%s",
strrchr(dst_ref_fname, '/') ? strrchr(dst_ref_fname, '/') + 1 : dst_ref_fname);

if it is intended to be that way, please ignore this issue

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