From 44af06fccfb0caef03a572a89c36a179f27679f5 Mon Sep 17 00:00:00 2001 From: Jennifer Hillman-Jackson Date: Wed, 28 Feb 2024 08:12:17 -0800 Subject: [PATCH 1/2] Update genomes.yml May 2017 (GRCz11/danRer11) --- genomes.yml | 22 +++++++++++++++++++++- 1 file changed, 21 insertions(+), 1 deletion(-) diff --git a/genomes.yml b/genomes.yml index 96d0c9c..409b51f 100644 --- a/genomes.yml +++ b/genomes.yml @@ -39,7 +39,27 @@ genomes: #- data_manager_kallisto_index_builder skiplist: - bfast - - dbkey: sacCer3 + - dbkey: danRer11 + description: # set from UCSC + id: danRer11 + source: ucsc + doi: + version: + checksum: + blob: + indexers: + - data_manager_bowtie2_index_builder + - data_manager_bwa_mem_index_builder + - data_manager_twobit_builder + - data_manager_picard_index_builder + - data_manager_sam_fasta_index_builder + - data_manager_hisat2_index_builder + - data_manager_star_index_builder + #- data_manager_bowtie_index_builder + #- data_manager_kallisto_index_builder + skiplist: + - bfast + - dbkey: sacCer3 description: # set from UCSC id: sacCer3 source: ucsc From f5b728bc1b3706954d68b92ac4df34460b4d2539 Mon Sep 17 00:00:00 2001 From: Nate Coraor Date: Wed, 28 Feb 2024 12:08:56 -0500 Subject: [PATCH 2/2] Typo --- genomes.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/genomes.yml b/genomes.yml index 409b51f..361d696 100644 --- a/genomes.yml +++ b/genomes.yml @@ -59,7 +59,7 @@ genomes: #- data_manager_kallisto_index_builder skiplist: - bfast - - dbkey: sacCer3 + - dbkey: sacCer3 description: # set from UCSC id: sacCer3 source: ucsc