From 5df38655c4b195f177d3f123db55e1ae32fd11f6 Mon Sep 17 00:00:00 2001 From: mikhailafanasev Date: Mon, 9 Mar 2026 17:33:06 +0100 Subject: [PATCH 1/2] fixes --- .../doc-odm-user-guide/attachment-transformation.md | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/docs/user-guide/doc-odm-user-guide/attachment-transformation.md b/docs/user-guide/doc-odm-user-guide/attachment-transformation.md index acb447e..72f03f4 100644 --- a/docs/user-guide/doc-odm-user-guide/attachment-transformation.md +++ b/docs/user-guide/doc-odm-user-guide/attachment-transformation.md @@ -12,9 +12,13 @@ e.g. Samples, Libraries, Preparations, Cell metadata, Expression, Variants, etc. ![Diagram](../doc-odm-user-guide/doc-odm-user-guide/images/attachments-transformation-diagram.png) ## Get the list of available images + Currently ODM has default image called `metadata-basic`. This image allows user to transform `CSV` files into `TSV` to create Sample group. +!!! danger "`metadata-basic` transformation is introduced just for testing purpose" + + To get the list of available images via API go to `processorsController` Swagger definition of endpoints and use GET `transformations/images`. Endpoint response example: @@ -208,3 +212,7 @@ is placed. As the result new Sample metadata group was created in ODM: ![Sample-group](../doc-odm-user-guide/doc-odm-user-guide/images/attachments-transformation-samples.png) + +To retrieve transformation job logs simply use jod id in POST `transformations/jobs/{id}/logs` endpoint. + +!!! danger "Transformation job logs are stored for 2 weeks as default in the system" From 44457722b612f04ba790bd56904571dda527fa3f Mon Sep 17 00:00:00 2001 From: mikhailafanasev Date: Mon, 9 Mar 2026 17:39:39 +0100 Subject: [PATCH 2/2] job id --- docs/user-guide/doc-odm-user-guide/attachment-transformation.md | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs/user-guide/doc-odm-user-guide/attachment-transformation.md b/docs/user-guide/doc-odm-user-guide/attachment-transformation.md index 72f03f4..c9adf8a 100644 --- a/docs/user-guide/doc-odm-user-guide/attachment-transformation.md +++ b/docs/user-guide/doc-odm-user-guide/attachment-transformation.md @@ -213,6 +213,6 @@ As the result new Sample metadata group was created in ODM: ![Sample-group](../doc-odm-user-guide/doc-odm-user-guide/images/attachments-transformation-samples.png) -To retrieve transformation job logs simply use jod id in POST `transformations/jobs/{id}/logs` endpoint. +To retrieve transformation job logs simply use job id in POST `transformations/jobs/{id}/logs` endpoint. !!! danger "Transformation job logs are stored for 2 weeks as default in the system"