error for unfound taxa when supplying a file to goat taxon search #23
Description
Hello!
When running goat-cli taxon search with a file as input I get an error for each query species which does not exist in goat. For species that do return a hit, the output is as expected. The error is:
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When running such species individually with -t flag, I get just the header output with no hits as expected so it seems the error is related to using a file with many queries.
The exact command I run is:
goat-cli taxon search -f $i --assembly --country-list --karyotype
Thanks! :)
Charlotte