Error at GDynArray: cannot add item, maximum count reached!

[Fengyaa]

Hi,

I'm extracting transcripts from a super large genome (more than 30 Gb) using gff annotation file, but I get this error:
Error at GDynArray: cannot add item, maximum count reached!

Does gffread have limit on the genome size or there are other factors may cause this error?

[biomarble]

Perhaps the extra-large single chromosome causes this problem. You can use splitLargeGenome to split the genome and gff files into smaller pieces and then use gffread to generate transcripts.

[gpertea]

Yes, this seems to be related to #125, have to fix in gclib